XLOC_005850 (gene) - C. hemisphaerica

Overview
NameXLOC_005850
Unique NameXLOC_005850
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000106:413289..416735+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005850 ID=XLOC_005850|Name=XLOC_005850|organism=Clytia hemisphaerica|type=gene|length=3447bp|location=Sequence derived from alignment at sc0000106:413289..416735+ (Clytia hemisphaerica)
CCTTTTTTTTGATCCGTGCTGAGACTGATAATTGAGCTCCCGTGTAGTAG
TGATTCAACCATAGATTGGACTTGAAATTCGCCACTGGTAACCAAGCCAG
AAATGAAAGCGCTCAAGAATTGTATGCCAGGTTCAATTTGCACATGAAAG
AGATGAGAGATACAAAAACACTTTAGCAATAAGAAGTTTTTTCAGGCTGG
GTGATATCATATCCCCCAAAATGAATACTTTTTCTTTCTGGAAAACAAGT
AGGCCTTACTCCCTATGGTAAGGTTTTAAAAGATAAAAGTTCCTATAGTA
TAGTAAAAGTTCCTATATTTTGTAGCTGTAAGACTATTTTCAAGTCTGCA
AAGTTCTATATTACTACTTATAATGGATTTCGACCATGGTGTCCTCCAGg
ttttcagcccccccccccccccccccatctgGGGCCTAAAATCCCCATTT
GGTCCCCCCCCCCattggaagaatatttttgttaccaACCGATTCGCTAT
ATTTTGCATAACAActtaacaaaaataacaatttcctGCAATGAAAACTC
AAATGCTGTAAATATACACATTTAATCATATATTTGAAACACATTTAATC
ATATATTTGAAACATTATACCTAATTTTTGCACTTTCTAAAACCAGACTC
CTTTATAACCCTGTATAACTAACATTTTAAACagccaaaataaataaacc
GAATGATGAATGGTGCAGCTCTGTCACAACAGTGCAAATATTCAATCAGA
TCGACGCTAAGTTTCGAGAAGAGAAGGACAGAAGGACagtaaattatctt
tttattgattCCTTCATATTTTTAAGTTTAGTTTAGTAGTGAGAAAAATA
ACTACCCAACATAGCCTTTGAATAAAGTAATCGTTCAAAAAAGTACACTT
TGCAATAAAGAACACAACCCACGGTTAAGTTTAATGGTTATTTGGCTGAA
AGTACAGCTACTTAAGGAAGTTACCGTCCCCATTAGAACCATGGGCCGGG
TATTTAGTGGTAAACAAGTAGTGAGAAAGAAGAGATCATGGAAAGAAATC
ATCTACAAAAACCATGCATACACAGAACAGGTTGAACCGAGCACTAATCG
AGGTTATAGGTAATCAGGCCAACATCCCAGGAAATGAAAAGTGTTCTCAC
TTCTCAAATGAAACTACTAGCTTACACCTAATACGATCGATCAAACTATG
CAGAtaagttttcacaaaaaaaactgTCAACCATTACCTAGTTTGAGATC
GTTCAGCATaagtttttggtcatttgcctTGCAAAAGCTGGGTTGAATGG
ATTATCCTATGCTCAAGAAAGCTCAAAGCAGAACATCCCGGCTATCGTAC
ATCAAAGATAGcacatgatttaaaaaattccaGTCCGTATAGATCAAATC
TTTTTTCCCTATGCTTGTTTACCTTGATATTTTACCAAACACCCTGTGCG
TTCAGGAATAAAGCAAAGCATGCCAAAGAGTACGCAGAAATTGATGAGAA
GTCATTTTGAATATGAGAATTTTCTGTATGGCCAGATAATACCGTGGGTT
AACGTCCCATatacaaaatttttctccaCAAGATCCCTATACAGCTGCAG
ATAGAAAGTGAATTTGATAAAGAACGAAAGATACATCAGCCATCTTAAGA
AGAGTGGTGTCGAAAAAGGAATTCAGCAGACCCAAAGTTAAGACTGTACA
GAAAACACTAAACAACCATCAACAGTCTCTTTCCACAGAgtatgaaaaaa
atgatgagaagTCATTTTGTATATGAGAATTTTCTGTATGGCCAGATAAT
ACCGTGGGTTAACGTCCCATATACAAAATTAATCTCAACAAGATCCCCAT
ACAGCTGCAGATCGAAAGTGAATTTGATAACGAAAGATACATCAGCCATC
TTAAGAAGAGTGGTGTCGAAAAAGGAATTCAGCAGACCCAAAGTTAAGAC
TGTACAGAAAACACTAAACAACCATCAACAGTCTCTTTCCGCAGAGTATG
AAAAAATTGATGAGAAGTCATTTTGTATATGAGAATTTTCTGTATGGCCA
GATAATACCGTGGGTTAACGTCCCATATACAAAATTAATCTCAACAAGAT
CCCCATACAGCTGCAGATCGAAAGTGAATTTGATAACGAAAGATACATCA
GCCATCTTAAGAAGAGTGGTGTCGAGAAGGAATTCAGTTCAAACCCAGCT
GCAGATTGAAATCGAATTTGGTAAAAAAGATTTTCGCAAATATTTGATAG
AAGAGCAGAATCATAGAAACTTAAAACACTTGAGTCACAGTTATGAGTTT
TTTAAGGAAGCATCAAAGCattaaacaaaatttaataaatttaaTAATGT
AAAAATAGTTGCTGAATTTGCAATTAAAATGCAgaaaaaatttaacattt
aattTTAAAAGCGAAATACATAGAACCAGCACTAAAATCTGAAGTATTGC
AGTGAAAATTATACGAAAGTAGTCATACTTAAGGAGCCAGTTATGTAGGG
GTAGCAGGGAATAGCAgtgttttaaaagaaataaaaatgattaaaaaaat
gattataaaaatgttaaaaaacgaAAACTAGAATTGATATATGGATATTT
CCAAATATTTCCTAAACATTGGGCTGATTCACTTTCTCTCAATTTTCAAT
CACCTAGGATCACACCACCTTGTGCTCTTACCGTATTATTTCGAGTAGAC
GCCCCTGGAATTTATTAAATCTTTtggattttagaaaaaaggcGCTTATT
CAAGGGGGGGgtatttaaaaagatttttttggccTTATTTTACATTGAAG
TTTATACTTAAAGTTTTTCTAGAATTTATGACATAACTTACAACCGTTTA
CCATAATCATGCCATTTATCCAAATTGATGTTAATCTTTCTTTCTATCTT
GGCTAATCACAATTTGTTTGACATAGATTTGAATTTGATCCGCGTATCTT
CCTGCTATTATGGTCTAAAacgtaaaagaaaaaaatttctgagctaaatt
tcaaataaattatTTGCTATAATGAAAGATCCAATGAAGTCAGTATAAAT
CACCCTTTTAACCAGCTGaagaatttagatttttgaatttttgtatcCAT
ACTACTATATGCACATGAATTCGGTTCCTGCAACAAATCTGTTGAGAGAA
AAGTTGTCAGTGCTACATAAGAATGCTAAGTGGGTTTAAAAACAATAACC
CTTGATCCCACACAACCAATAATGTGCTTTTCAACAATGCAAGAATCACA
CTCAGCAAAGCTATCTGATAGGGTAGTCTCCGTTTAGCAGGTCATTTGAA
TCTGCTATTAAAATTCTTTTCTGTCACCTTTAAGTTGAATATCAGAGTAA
GTATTGTAACATGACAAATCTACTTTGATCACAAACCATTTTTATCCTGC
ATGAATCGAAGTTGACAAACATTTCCAAGCAGTCCGCAAAAAGAAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00010409TCONS_00010409Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000106supercontigsc0000106:413289..416735 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.07	0.15	0	0	0	0	0.05	0	0	0	0	0	0.03	0	0.03	0	0	0	0	0	0	0	0	0.35	0	0	0	0