XLOC_005708 (gene) - C. hemisphaerica

Overview
NameXLOC_005708
Unique NameXLOC_005708
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000103:253175..256693+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005708 ID=XLOC_005708|Name=XLOC_005708|organism=Clytia hemisphaerica|type=gene|length=3519bp|location=Sequence derived from alignment at sc0000103:253175..256693+ (Clytia hemisphaerica)
AGAAAAGTAGTGAAAACACGTCATACAGATGTAGACAAATGAtaacaaat
tttacaaactCTATTACACATTTTGTTTCTGCCCATGCTGTCATAAAAAA
GGGATtattaaaccaaaatttgggtaaattgtttgttttagagGGGGGTC
AGGATTAGATAGGGGTGGTCGGGATTAGGCAACCTGACGGTACATGACGT
TGGAATAGTCGTAAAAGTCGTAAAAGTCATAATTACCAATAATTTGCTTG
CGTTCTATCTGGGgaataaatttgtttttaaatatgacTTGAACTATAGA
CTCATTAAATGTGTGAATTTATGGTATAGTGTTTTTTAAGAGCCTTGTGt
gatttgatgaaatttaagTGTTTGCATCGTAATCAATTACGCTAATCGTT
TTCATTTGGACAGTATTGGTAATGAGTCAAcgctatttttaattttggta
atGTTATGGGGACGCTTTTTTGGATGGATTCCCTGACTGTAAGTATGCTG
CATTTTGGTAAGGGTACTCTCCATCATAGACACTAAATGATTgagcaaaa
aattttaaaaatagctctaaaaactttttgcacggtgaaattttttcaaa
ctttcaagaaTAGTAGAAAACTATTATTTGAACAATTCTAACCAGCgcaa
ttttttactttttcttttctttgttctCAACGAAGAACTGAAAACTGATG
TATGGAGTGAGAGAAAAAATGCCTTTGTATGAGCATGAGGTGTTGTGTTG
TAGAGGCAGTTGCAAAAGTCATAATTAAGGAGAATTTGTGCAAGTTCTAA
GACCAGATTTTAAAAGGAGAAAAGCCAAGGGAAATGTTAGCCAGCCAAGT
GAAATAATGTTAGGCATGTTGACGATATCACAAAACTTTTAGATTAATTT
CTTTGTTTAATGGAGGTctgataaatttcttttttaaccaGGGTttagat
gaatttaaaaaagatagagTGTCCTAGATGGATTAGCGAGGCGCTCGAGA
AAATCGCCTTTCAATCTCTCGTAATGAAACGACCACTCCTTTCTTAAAAA
CAAAGTCAAGCAAAGgataatcaaagtcaatcaagcatcaatcgaataca
atcgaatttcaatcgaatGTAATAGAACACCGTTcgcgaaaaagaaaaac
aagcgGTTCATGGGAGTTACCTTATACTAACTTACCAAGTTGCGTAATCA
CACGGTCTAGAAGCGGGTCGTTGAAAAATGCTTAAATATGTATGAAATAT
TTTCCTTCATTGCAAAAGATTGGATGGATGGAATTTTTAACTGGTGGATA
GAATTTTCCATTAATAATTGAAGATtctattaaaagaaaaatgaaagtgc
CGTTCGTTTTAGTCTTTTGCCGATCTcatttcaaagtttaaattttctta
ttttcgcgCGTTTAGCTTGAACcgttctagctcatttgcacagggttgga
aaacccgttgcaaatgcacacccccgtgcaaatgcaaggatttacTAGAC
TAAAAATTGTTAATGTAATAATTGTTGTCTTGTTGCAGTTAGTGTTTCCT
AAACCTGATATTTTTGGGAGCTCCTTCATTCTTTATGgatgtctttttta
tttttttaactttgagaGGATATATCTGTTTTTGGATGGATTCCCTAACT
GATCATGTTGAAATTTTTTAGCCCATTAGTTTcccgtttttgttttttgt
tttccagTTTTTATTTCCAGTTTGTTGTGCTGACATTTTTCATAGcataa
aatttctcataaaaaTTCTCAGGTGAATGGGGGCACCTAACCCAGAGCAA
ATTCTTAAGGGTACCTAAATCATTAGGGGCACCTTATTTTGTTGGGGGCA
CCtaaaaagtgggctgaaaccatgtttTTGGTCAGAAaaacgattttcaa
acttgaaaaaattctctcacAACTTACTTGCGATTCTTACTGAGTTTTAT
ggaagttttatttatttctacagTTTGAACACATCAACAAAATATCAATC
AAAGATAGTTACAAACAACGTCATTTCCTGTAACACCACACTTTTTTCCT
AATGTTTGGTTGAAATTCAATGATAATTGTAAATAGTTGTGTCTTATTTT
AGATTGTGGAATTTTTGAAAGATCGTGGGTATGATGCGGAGACATTGGAA
AAAGTTGAAGAATCAAAGGTAAGAAGGCTTGTTTGAAAATTCGTAAGAAT
AATTTTGAATTCTAAGTTACACCCACCTTCATATGATAGTTCATGCCTTC
CGATCCTAAACTAAGAGTattaataaaaaaagtattCACAAGGAATGTTT
ACATACAAGCTTCAATTCTTAGCAATTAGCTCTGCACATGTATTTAGGAA
AAAGCTACTAGAACACACATGTGGAAAAAGCTGTCATTGACAATGTTAAC
AAAAAATGTGGGAATAAGTTTAATGCAAACTAATTTTGATAAGTTAACCC
CTTTACTACTGTTGACGGGATAAATCATGTTGAAATATATCTTGTAACAA
CATTGATTTTGAAATCGTCATTTTAAGCCAAACTTGCTGGGTTTTCCTTC
CATTGAAAAATAACTTCAAAATTCGGCCTTTTCAGTGAGATTTTGGActt
aatgtcaaaaaaagtgcctaaatttcgcaaaaatcaaCTTTATTGAGATT
TTGACTGCTTTTTGACCATTTCATCAACAAAATAAGGTCAAATTTTTCAG
CCAACCGAAAGTTACAAGCTTCTGATTCCTTCTAGAACCGTAGATGTAAC
TGTTTAAAGCTAGAgctatgaaatttttttgtaagattttaaaAGTGCGT
CCAGTAGCTAAAAGGTTAATTTCTCGAAAAAATAACTATTATTGTGATCA
AAGTTTTCgatttttggggtattttctttggttttactGGGGattctttt
aagaaataaaaaaagttgtttactactaaaaatttgcaaaaattaatacc
ctatgaaaaattggacatTCTATTTAAgaattatataattttttatagGT
TTGTGCTGAATCAATACACCTTCTAACACTAAATGATTTTAAATATATTG
GCATTGGACTTGCAGATGGCAGGCTTTTGATTGAGAAATATAGAAGTACA
CAATTGGCTGAACTGGCAGAACTTGTTTCGCAAGCTAGAACTCAACCTAA
AAAAGACAGTAAACAAGATTCCGTGATGGTTGAATTTGTTTGGCAGCATT
ATAACATTAGTCTTGGAAAGTATACCACAGTGCCTGTTAGTCGTGGTGGA
GGTGCCCGCAAAAAATCCTTTAAGCGGTTAACAGCtatgaaagaaatatt
tactATAATAAAGGAGACTTATTTTCCTGGTGGAGAGAGCAAACACAAAG
GCAGTTTACACCTTTTAAAGGCAATGTTACATGCATCAGATCACACACTA
ATGAATCTTTCATCAACTCTGgatgactttttgaaattaaaaaagatgAA
ACACAACAAGCTCATTTTGAAAACATCGAAAGATTGGGACCCTACCAAAG
AGATGCAATCTAAAGAAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00010169TCONS_00010169Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00010169-proteinTCONS_00010169-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000103supercontigsc0000103:253175..256693 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.03	1.22	1.85	1.9	0.66	0.59	0.53	0.39	0.37	0.4	0.33	0.76	0.38	0.34	0.29	0.46	0.28	0.37	0.55	0.59	0.83	0.94	0.29	0.36	0.57	0.46	0.7	0.37	0.15	0.07