XLOC_005557 (gene) - C. hemisphaerica

Overview
NameXLOC_005557
Unique NameXLOC_005557
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000100:261477..265352+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005557 ID=XLOC_005557|Name=XLOC_005557|organism=Clytia hemisphaerica|type=gene|length=3876bp|location=Sequence derived from alignment at sc0000100:261477..265352+ (Clytia hemisphaerica)
ctttcgagTACTGTCTCAAACATGCgaacaagaagaaaaagaaacaaaaa
actattatttctaattaaaaaaatattatgttAGACTCTTATAAATgcat
tttatatttaaaaactaCCTTAAAAAGTGTATTAATGTTGGCGTGTTTTT
GATTTGGTGTTCAGCCGAAAGGCTTCCTTAGGCGGGtatatttaatttgg
cggttaatGGATTTTGTAATTTCCGGTGGATTAGCGAAGACTTAAGGCCT
AGTGCTCTCTATCCCGACCCAAGACAATTTTACTTGATATTCAATCGGGT
ATGTAATTTGGCGGTAGGGTCGATCTTAATTTTGGGTATTTAGCCTAGAA
CCGCTAAACCCCCTGATTTAATTCCCGATGAAATTAACACACTTAAGTAA
CGGAAGGaaccttctcacagacccactgggacccgtccccactggaaaaa
ttggccaaaatatcgtccccagtggtaaattatactccaatttttatcCT
GACTGAAAATGATCCAATAAGCCAATCCTccctgcaaaatattatgctat
ttttttccatcgccactgaattttctgtcttgaaaacaaaagaattgaga
TCCTCATCCATAGAAAATATAAGAATATCAATCCCAGCTAATTGCTGTAA
TCGTTCTGCATTGCATAGCAATCGGCAAGCGAATATTTTGCTTCTAATGT
TTTCTCATGGTTTTCACCCAAAGTATGGATTCTCCTATTCATAACATCTG
TATATAGCTCGATCGCTTTGATGTAATTGTTCTGCCCATAGTAGCACTCG
GCAAGCCAATATTTTGTTTCTAATGTTTCCTCGTGGTTTTCACCCAAAGT
ATGGATTCTCCTATTCATAACATCTGTATATAACTCGATTGCTTTTATGT
AATTGTTCTGCCCATAGTAGCAATCGGCAAGAGAATATTTTGTTTCTAAT
GTTTCCTCGTGGTTTTCACCCAAAGTATGGATTCTCCTATTCATAACATC
TGTATATAACTCGATCGCTTTGATGTAATTGTTCTGCCCATAGTAGCAAT
TGGCAAgccaatattttatttttaatgttttctcaTGGTTTTCACCCAAA
GTATGGATTCTCCTATTCATAACATCTGTATATAACTCGATCGCTTTGAT
GTAATCGTTCTGCATCCTGTAGCAGTCggcaagaaaatattttgtttcta
aTGTTTCCTTGTGGTTTTCACCCAAAGTATGGATTCTCCTATTCATAACA
TCTGTACATAACTCGATCGCTTTGATGTAATTGTTCTGCCCATAGTAGCA
ATTGGCAAgccaatattttgtttttaatgtttccTCGTGGTTATCACCCA
ATATATGGATTCTCCTATTCATAACATCTGTATATAACTCGATTGCTTTG
ACGTAATCGTTCTGCATCCTGTAGCACTCggcaagaaaatattttgtttt
taatgttttctcGTGGTTATCGCCCAATGTATGGATTCTCCTATTCATAA
CATCTGTATATAACTCGATTGCTTTGATGTAATCGTTCTGCATCCTGTAG
CAATCGGCAAGAGAATATTTTGTGTTTAATGTTTTCTCGTGGTTTTCACC
CAACGTATGGATATCCCTATTCATAACATCTGTATACAACTCGATCGCTt
tcgaatattttttgatttttgaatattgaaGGGCTAAGTTGAATTTTGTT
ATTAGtgtagtttcattgttttcaccAAAAGCTTGATTCGTACTCTGCAG
TACTCTTTCACCCAATGAAATGGCGTTTTCATGATCACCCTCGTTTGAAT
AATCACTCACCAGGTTACACATAGTAATTAGTGTTACTTCATCATATTCA
CCATAAAGttcagattgttttttaaaaagctcTTCATGCATCTCCAAGCT
TTTCTTGTGGTTGCCAATATTTCGATAAAATGATGCTAGGTTGTTTTTCA
CCCCTAGAACGTATCGCATATTTATGGTGTCCACTTTGGACGATGATAAC
GTTTCTTCTAGTATTTTGATAGCGTCTGTGAACCTTtgcaaatcttttaa
aattaatGCTTGGTTATGTTTAACGTGGAAATCGTTTGAAAATTCACATT
TTGTAATAATTATGTCAATGATTGTCAAAGCAGCTTCAGACTTTCGTTTT
ACTTTCGCGATGTCTCTTATTTCATCAACGTAATCGATCATCTCTTCATA
AAAGCTTTCGTCATCAACTTCAGTTGTTAAGATTTCAAAGAAATGATTAA
AATATTCTTTCGCAAAGTCGACATGATGAATAGAACGAACTTTTTGTTCA
CTGtcaatttctttaaagaaagcTTTTAAACACTTGATAAGATAACCGAT
TTCATTAGTTTTACGCACTGTTGCTTGAATCAACGAATGGATGGTCACGA
TTATTTCATTGTCAGTGTTTCGTTTATTTATAATCGATGCACTTTCTAAC
TGGTGAAGGGCAGAATCGAGATCAATCTTGGATGATTCTTCAGCATCGAG
TATACGGACaacattcattgaaatttctTCACTTCTCAAATAACACATTC
GGTTTAGAATCTCAATAGCCAGTTTAGAGTCTTCATCCTGCTCTGAGAGA
CGTTTAAGATTAATCTCAATGGCAGCAATGGTTGAGACGCTGTGATGGGT
TTTCGATATCGGTTTCTGGAGGACGTTTGCTGTTTCCAATTTCAACAATT
CGATAAATTCTTCAGAGGTCATCGTTGTATTGCTCAAAGCTGATATGACC
TGCTGAAGACCAAGGGGATGTCCCTGAATCAAGTCATCGATGTTCTTGAT
TTGTTGCTTGGTAAGATTAGCTCTACACTGTTCAGTTAATAGTGTATTTG
ATTCTACTACAGTTAACCTTTCCACCgcgattttctcaaaatctggaGTA
GGAAAGTCTTTCTTTTGTGACGTAATCAAAGCTGTGTATTTGTTGTACGG
CGGAAGAAACTTTTTGATGACGTTAAATTCCCATGCGTcgtcaaaaacaa
ataaaggtTCGATGTCGTCAAGGTAACCATAAACGCTGGCGATGATGGTT
GGCATACTCTTTATATTTTGATGCTCGTCTCGGATTTCTAAGTTCAATTG
TTCAGCAAGTTCGATAAACGCTTTATTGAGTGAATCCTCGCTTTCACTTT
TTAACCATATCACATTCTCGTTAAAGTGTTTTCCGTAAACCTCTACGTAT
CGTCTAACGATCTCCGATTTTCCTGTTCCAGCAGCTGCGTGCAAGATGAC
ACGGTAAGCCTTGGTGTTGTTTTGTTTGATTAGTTGGTCAATCTGTTTCA
AGATGTCCTCTCTACCGGTAAAACTAGCGACGGCCTTGGTGAATCCATAC
CTCAATGGTGAAAGAAGATCATCAATCTCCTGTTGTGGTACACCTAAAGC
AATCAGTGACGGTACAATAAATTGATAAGCATCTTGGTACAACTTATTCT
CCATGTACATGGTTGAATGTTGACCGATATTTCTACCAATACTCATTCTT
TTGCAATGCGCTCCGCGTTTAATGTCGGTGTTGTTTGGGCGTTTCTGCCA
TCCGGTTAAAGGTGGATCCACATTGGGACAGAAATGAATGATCAGGAAGT
CCAATAAAGTACTATCAAAAGTATCAGAATAAGTTTCGTCGGTGTTTTGT
GGAAGTAATTTGAAGTACCATTGTGCTGATATTTTATTCTGAGAACGCAT
TTGTTTCAATTGTGgtttaagttttttgaattcTTGATATAAGAGCTTGG
GGTCTTGAGGGAAAACTTCGTGGAAGAGGTCTCTCTTGACAACCTCGCAT
TTATCAATGAGCACTTTCATTTTTCGAGCGTTCTTTCGGTTCTCTCCTGT
CCTTATCGACTTGGCCGGTGTTGGTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00009910TCONS_00009910Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000100supercontigsc0000100:261477..265352 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.11	0.06	0.06	0.02	0.33	0.29	1.38	1.73	0.52	0.47	0.54	0.57	1.61	0.85	1.8	2.4	1.23	0.8	1.69	1.29	0.81	0.77	0.63	0.64	0.67	0.82	0.38	0.44	0.63	0.71