XLOC_004982 (gene) - C. hemisphaerica

Overview
NameXLOC_004982
Unique NameXLOC_004982
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000088:369740..374614-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004982 ID=XLOC_004982|Name=XLOC_004982|organism=Clytia hemisphaerica|type=gene|length=4875bp|location=Sequence derived from alignment at sc0000088:369740..374614- (Clytia hemisphaerica)
AGTACGGTGTCCCGCAGAAAAGATTATCAAAACTATAGACGAGATTTATC ACTTCAAATCGATTCAAGTGGGTGAGGTGCAAAATTTTTCATGTATCTAT GGTCAAACAGACGAAGCTAAAAAACTTGAAAGAGCAACAATATTGTCTCG AGCATGTGCGTTCGTCAACGGATCAAAAAGTGTAGCACAATGGGAACCAC TCGACATATCCTCATGCAGAAGGAACGATCAGGAAAAGCAACTTCTAAAT GTTGATTTGGTGAGTTAGTTGTCCACACATATCTTTTATAAGAACATCCA AAAAGCCTTCAGATGTGCTTAACTTTTTGAGATTCAAGCCTAAANTGTTT GTCAACGGATCAAAAAGTGTAGCACAATGGGAACCACTCGACATATCGTC ATGCAGAAGGAACGATCAGGAAAAGCAACTCCTAAATGTTAATTTGGTAA GTTAGTTGTCCTCACATATTTTTTATAAGAACATCCAAAAAGCCTTCAGA TGTGCTTAACTTTTTGAGATTCAAGCCTAAAGTCCTTTAAAATGTTCATA TTCATATTTGTGAGTATTTTTGTTCAAATTCCTAAGAATAGACCTTTTCA GAATTCACGGTTTACCTTTTAGAGTAAAATTGACAGTGAGACTGTTGGCG AATTTGCAAAACAGATTAGCAAGTTGACGTCCAATACATCACTTATCAAC AACAAGCAAACTGTTCAAAATTTAATCAAAGTTCTTGAAAAAATTATTAA CATTCAAAACACAAAAATTGAGGTAAGGCTTTATAACAGCTCCTGCACCA AGGTAAACATCAATTCTTGAGTTTAACCGAAAGTCTGACTTTCAGAGGCT CCTGAAATCTAGATATTGTACACCAATCGATGCAGAATTACATATAGATT CCAAAGAATCTTAATGAAAAGACAAACAAAGATTTCGATATAAAATGTAC ACGTTTTTTTATATCCAAAATTTTTGAAGCCTTCTGATGTTCATGTCTTT TGAATTTTAAGCCTAAAAATGTTCTTAACATGTTCTCATTTCCCAATTTT TTGAGTACTTTTGTCTATTTTCCTAAGAAATCGGGTACTTCAAAGTACCC AAAGCCTAAAAATGTTCTTAACATGTTCTCATTTTCACAATTTTTTGAGT ACTTTTGTCTATTTTCCTAAGAAATCGGGTATTTTAGAGTATCCAAAGCC TTAAAATGTTCTTAACTTGCTCTTAACATTTTGGCCATTGAAACCTCATG TTCCTATGTAGTTTGTTCATAAAAAAAACGTGAAGTGCAATTTTAATTTA GTATCTAAGGTTGTTACCATTCACTTAATATTACAGGTCAAAGAAAACGT TTTGAAGATTCTGGACAACATCATACCAATCAACGATTCAATTATTCCAA ACGAAAACAAAAATCAACTTCTTAGTTTTGTTGACAAAATCACAGAAAAC ATTCAACAACCTTCGTTCAATTATTCCGGACAAAATCTCGCTGTTTCGAT CCAAACGCAGAACAGGTCGCAAGCAACAAATATAAAAAGTTTTGACAATG ATGAGAAAATTGAAATTGAGTTCAATAATTATGACAACCTTACCGTTGTT GGCAATATTAGTCAAGTGTCTTCCATATATATCCCAGAAACGACTTTCAC TGATATACTAAGCGACATCAAAATCATATCTACTGCATATAAAAAAGACA CTTTTTTCAGTACAACGCCATCAAACAAAACACAAACTGGCAGTTACATT ATGTCAGCATCAATCAAGAGTCAGCATATTGAGAATTTGACAGATCCAAT AAAATTGAAATTTAAAATCGATGAAAGAAAGTCAAACGGGACATGTGTTT TCTGGGAAACAGGTTTAAATTCTTTTTTCTTTCATTTCTTTGGCGGTTAT TTCTTACCTGGAGCAATCCCAGCTGGCACACAACGTTGTTTCGACGTTCA CAACGTCCATATAACGTTAGAAAAACGTTGAAACAACGTTGTGTGACAGC TGGGATCCGGTTAATATTTCATCATGTGATATATAAACATCAAAATGAAA TGATGAATGAATCTTTTTCTCTTTACTTCAATAGACGGAAACTATTGGTC AACTCGTGGTTGCACAACCTTAGTGAATTCGAAAAATGAGGTCACATGTG AATGCAATCATTTGACAAATTTCGCCATTCTTTTCAATGTGTATCATGTA GATGAAGATGTGTTGAAATCGCAAGAAGTTTTGAATTATGTTAGTCTTGT TGGTTGTGTTCTATCCATCGTTGGATTATTGGCCACTGTTATTGCTCTTG GTTGTTCGACTGGGTAAGAATCTGACTGGAACAAAATAAATTAATTCTCA CATAGAATGCCTTCTTGTAACAAAAGAAAACATTTTTAACTTAAATTCTG GTTCGGTCAAAATTGATAGTACTAGTTTTCCCGACCCGATAAGGTTGATA GTGAATTTATGCATTTGCACTGTTGAGAACGGTAGGGTGACTGAAGCAAT TTGTCGTCCTCAGCTGGTCAGGATCTAGACAATTCAGCAACTAATCGTCT CCGTCGTAGAAAAACACAGATACATAAACCAACTAATGGATGATCTTTGG GATAACGTGTAAAAGCATGTGTGATGTAATCCCTAAAGATACGGCATAGA CCGCTGTTAAAACTTGTGACTTAGGATAATTGCAAGGCAATTTATCTTCG CTGCATTTAGGGGTCCCCCAGTGGTTTGCGTGAATGCGTGAATGGGCTTT TTCACTTGCGTGAATGCCTAAAAATAAAATAAAAATTGCGTGAATACGTG AATTGGAAAGCTTTGCGTGAACAAAAATTGCGTGAATTGCGAAAAAAACA TTGTGTGAATTTGGGAAAAGAAATTTACGTAATTGCATGAATTGATGGTC CGTTGGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGTTCATTTATT TTCAATATAGCGTTTGCAATCAAAACCACGCGGGTCACGCGTTTTAGTAT GGAAAATAAATGGTTTCATCTCCCATCCAAGAGTTTTATCTAATCTAGAA CAACCTTTAGGGTTTTCAAATCAATGGTTCAAATACCAATCTTTAATCGT TATAGAATAGAAAGGGCTGACGTCTCTTTATTATTTTCTTATAGGCAAAG AAAAACCCGTCGTAAAACCGGTCAATTTATGATCATAAATTTCTGCATAG CTTTGGTTCTTCTTCTTTGTGTGTTTATACTCATCACCAATATGGAACAC TTTCATCATTCTTCAACTATTTTATGCCACAACTTGTCTGCCATCTTACA TTTCACGATTATGGCAACTTTCTGTTGGACGGCCGCCCAAGCGATCTTTT TGTATAAGAAAACTGTTCTGGCGACCAAGAATTTTCAAGGAGATAACATG AAAAGCTACTATGCAAGTCTCTGTCTTGCTTGGGGTGAGTTTCTCAACTT TTGTTTTTGTTTTAAGCTCTATGAAAAGACAAAGCAACGCTGTCAACTTT TGAGTAATTTTTGACACTGTCAAGATGAAATATATATCATTTATTGGGTG GTCATCAAAGATAGTTATAACAGTTGGGACTTGTGTATTCTCTAGGCTTA CCGATGGTCGCTGCTGCAGTAACGTCAAGATTTACCAAAAGCCAATTTGA CAGACCTGACAATGAACTGTAAGTGGCAGGACTTTCAACAATCAATAAGG ACTCGTAGCTAGGGGACACTCAAATAAGAGTTTCATTATCTGCAAAACTT TCTGATTTTTTCCTTTCCCGATGGCTTGGTAATACATCTTGTTTGCCTCG CAGTTTTGATGATGGAGCTCTATTTAGACAGTGATTCAAATTCACTGATT CAGATTCCTCAAATTTTACAAAAAATGAACAGACTCGATCTTTTTAGTTA TTTTTTTACCATACAACAATGGACTTGATACAGTCGTGAGTGTTGACATA TTGTCATAAAAAGCCGAACTAAGAGACAGGGTTCTATTTTAGAAAGGACG ACAATCAAAAAGATTTTTCAATTTTTCTTAGATGCATCTTGAAAGGTGAT ATTTTCATTTATTCGACGATCATTCCAATCACATGTATCATTTTTTTCAA CCTCATTGTTTTCATAATGGTCATGCGCAAAGTTCATGGTCATTTCAAAA CACGTGCTTCATTTCAACAAAAAGAAGACAAGCAGATCTGGAAAAGAGCG AAGGCTACAATGATCTGTATGGTTCTATTAGGATTGACCTGGATTTTCGG ATTCATGGCTGTTGGTGATTTACATGCTCCTTTACAATGGCTGTTTTGTA TCACGAACACTTTACAAGGTGTTTTTGTTTTTGTTTTCTACGTTCTCCTC AATGATGAAGTGCGAAAAGCTTGGAATTCAAGATAGTCTTCTGCGTTAAC GCTTACTTCACACAAAACCAAGAAAAAAACATCGGAAAATGAATTCAAAA TCGGAACATTGAGAAATCATGCAAGAACTAAACAAATGAAAGATAAATGT GAAACTTTTTAGGACTTTGATATACAGGGTGTCCCTAATTAAAGTATCGA GTTTGAACATGCGATTGAGTAGAAAAGTTTGTGTGTGTTATCGCTAAAAT ATAAGGACGCTCTCCGTCACACAGGCTATTACAAAAGGTAGTGACAACGT ATAAATTAATCGTAATGACAAAGAAAAAAGAGGGAGAGCTTAAAATACAA TTTTGTGAACACGCACATAAAACTTTCTACTCATAGTTGTGTTTCGACTC GATACTTTAATTAGGGACACCCTGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00008900TCONS_00008900Clytia hemisphaericatranscript
TCONS_00008899TCONS_00008899Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00008900-proteinTCONS_00008900-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000088supercontigsc0000088:369740..374614 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
ADGRE5CD97 antigen isoform 1 preproprotein Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.3 1.13 1.14 0.95 0.34 0.21 0.16 0.19 0.78 3.33 0.34 0.27 0.74 0.67 1.64 0.66 0.7 1.31 6.03 6.44 0.23 0.36 0.61 0.7 1.5 1.27 0.11 0.3 0.49 0.57