XLOC_004887 (gene) - C. hemisphaerica

Overview
NameXLOC_004887
Unique NameXLOC_004887
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000087:57376..59671+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004887 ID=XLOC_004887|Name=XLOC_004887|organism=Clytia hemisphaerica|type=gene|length=2296bp|location=Sequence derived from alignment at sc0000087:57376..59671+ (Clytia hemisphaerica)
GTTCGTCGGGGGCTCGTCCTATTCAAATGATTCACTTTTGAAAGATTTAA
AATCTGCTGCGTTTCTTCATTTTTGCGTGTACTTTTGAAATATAGCTTTT
AGAGGTGTCCCTTTAAAAaggtaaacattcgaaagtgGCACGCAAATCAC
ATCTCCAAAAATGGCGAAACACGACTTgacctttttttttcaaattttac
agaTATTTATTCTGAGATTCAACGAAATTCACATTAAAGGTATTCATCTG
AGACTTGtctttatatctttgtttactCTAATTCTAGGTATTAAAAACAC
AGAAATTTGATAATATGcttcaaaatgagaatttttaaattttttgtttt
ggtattttttgtgGGTGGAGCATTTTCTAGTTCTAATGATGACTTTGTCA
CCTTACCAAATGCAGAATGTATGCCAAGGGAAACTGTAGTTTCTATTGAC
TCTCCAAGATATGCCCTAAAACCAAGTAAAGTTCTACTTCACCGTTGTGA
TGGAAGTTTCGACGATCTAACACCGGCATTGAAAAGTTGTGTTAAAAATG
AATCAGTAACTCTCAATGTTAAAGTACAAAATATCTTTATGTTAACTAAT
GAGATTGTTGAGCTGGAAAACCACACAACTTGCAAACAACAGTGTGTTTT
TGATGGTTCGCAGTGcaataaaaaccaaaaatgGGATGCTGAGAACTGTC
TTTGTGTATGTGACCACAACAAACGATTTCAATGTCCTGAACATCATATT
TGGGAACCAAATCTTTGCCAGTGTGTTTGTAATCGAGCTTGTCCTTTCAA
AAGACATTATCTAGATCAAGAAGACTGCACTTGTACTTGTAAACCAAAAT
TCTACAAGCGTTGTAATAAAAGGGACAAAGTTTTAGTGGCAGACAATTGC
ACATGTACAGATCCCAAGTTTCAACCTGTTGAAGGACTTGATGGAAATTG
TGATATTATACCAACAAAATGGGCAGTTTTGATAATTGTCTTGTCATTCT
TTGCTATATTCATAATAGCATTTGATTGTATTCTATACACTCGTAACACT
GGTTGTGTGTATCATACAACTCATATTTGTCACAAAAATGAATCCCGAGA
AGAATTGTATCCAATGAAACGTGGTTTAATGAAAACATCAAATGAAGTGA
GAGTATGAGATATAGGTTATATTCAAAAGGGGTTACTTTCAtaactaccg
taagttggtctaatatcgacatcctcctttagagacaggaataatatgaa
agtttgaaTTACTGACTAAAAAAGGATGATTCCTCCCTGACCACCAAGTA
AAGAAAAATAGCTTTGACCtttttatcaatttcagctgataaaaagggtg
ttggaaatagatgagggatgttggcattagaccaagttacggtatggGGT
ATGAAAGCACAAAATATGTTACATCTTGGTGATGGATTATGGTTTGTTCA
GATTAATTTTCATGGTTATAGCTGTTTTCTTTGAGAAATATTTGGAGAAC
GCACAAATTGTTCCATCGTATTGAAGCTGGGATGGTGAAACGATCTAGTT
TGCTTTGGATATTAATAGCaaatcataaaaattgacaGCTAATTTGCTGT
TCATTGTTCAAATTGCTTCTCTACATTCCCTTGctaattaaatttttgaa
agtttttcactcGGGACATTTTTACCCCCCTTAAAGATAAGAAATGCTCT
TAAAACTTCCTCATTTTGCCTCAATTCTTCTTATCAGCTCATTTCTAGTA
TAGAACTCCCAACTGGGACATTCTTATTTCAACCCACTAAGCAATTAGGT
TTTTAGAGTTTTTCAACCCcatgcttattccaaacccccatCTATTATAG
ACTTGAGTGTGTTATTATGTGAAATCATTATAAATCAgtgtttttgagaa
aaagtctTGAGAGAGAGGCAGGTCCTCTTTAAATACATGTTTTAATGGTT
GATTTGATTTCATATGTTACAGCAAACTCTTTCAAAGTTTAATCCATTCA
ACTGTTCTTTGTAGTCTAATCTCTTGTTGAAGTGTCACAGGAAAATTTTC
ATGAACAATttgcttttttgtttcaattttaggGCCAAGAAAACAAAAGT
TGTTTATGAAAATATGAATCAGTAAAACGTAGATAAatttttaataacaa
aaaaatatcctATATATCATAGAGCATATAGATTTAGAATATATTTATAA
CTTTAGAACCTTTTTGGGGTACTTTGTAACatgtaaataatttttattgt
atataaaatgttcgaaaatatgaaaaatatttgaaaagaaaaaaac
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00008698TCONS_00008698Clytia hemisphaericatranscript
TCONS_00008699TCONS_00008699Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00008699-proteinTCONS_00008699-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000087supercontigsc0000087:57376..59671 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.56	6.45	2.84	2.47	7.56	5.94	7.7	8.51	5.63	11.05	5.78	6.54	23.27	16.04	12.85	12.92	6.56	14.98	24.87	28.31	8.17	7.93	10.7	12.05	7.44	6.71	86.79	75.1	35.98	33.74