XLOC_004364 (gene) - C. hemisphaerica

Overview
NameXLOC_004364
Unique NameXLOC_004364
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000079:104724..108101+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004364 ID=XLOC_004364|Name=XLOC_004364|organism=Clytia hemisphaerica|type=gene|length=3378bp|location=Sequence derived from alignment at sc0000079:104724..108101+ (Clytia hemisphaerica)
CACAGATACTCCAATTCGAAAAGATGTGGTCATTGGTCGAAGTTTTGTGT
TACAATGTCCAAAGCTTTCATATAATTTccctcaaaatattttatggGGT
ACAGTTCCGCAAAACGGGAAACCTATTTTGTTGGCGGATACCAAAGAAAG
ATACCGGATGTCGAACGGAGATCTTTTGTTTACTCACGTGACTGAACAAG
ATTTAAAAGATGTTAATGATTTGATTGGTGGAATTTCTTGCATAAATTAT
CATAATGGATTATACGTCCAATCAGTAAAATTCAATTTGAAACGAGTGAC
AGGTATTtctaataattatttttaggtCCAATTACGTCCAATTTTACTTT
GTTCTGGGTTTTATTTAGAGGTATAAAAGCAGGTTAAAAAAGTTCACTCA
GGCTAAAAACAGTACTGGGGAATGCTCTTCACCATGGCCCAAATCTCATC
TTTTAAGAGTTAAAGGATCCAAATCGATAAATACAAGACTTGTTATAGCT
CAAGCAGCATACCCCTTCTGTAAAGGTCAATGCATTAGTCGCAATTGCTA
GAGATAATATACCgttaaaatttaccaaaatgtttttgatttcaGCATTC
GATGATAACTTCGCACCCAGTTTTTTGGAAAGCATTTCTAGCACCAATGA
TGCTTACGAGGGAGAAAAGTTCAAGTTTAAATGTTCTGCTGGTGGAAGGT
AAAGGTTTATTCAGTCTTTCTGCAGCATCTCACTAAAGGTTCTTCATCAT
TCTAAAGTGTAACTTCATACTTGTATGATTGGGAATCATCAGACATGCCT
GTCCCCGCCATTATGTGTTGTTGAACCGCCCAACTTTACGCCCATCTGAA
AGCTGAAGTGTCTGAAAACAAAGCCTTATATAGTGCAATGCAGATCAGGA
ATTACAAACTGGACATTTTCAAGCTTTCAGAGGAcgccaaaattattttt
ctcttatttacCTCCCAAAGTCATGTAAAAACCACAATGCTACtgtaaaa
tatgataaaatagttttctaaataattttttcaattggatgcaggaaaaa
tcaaattttcatccccTCAAGTACAATCAATTTCTTTCCCTCTAGACCGA
CTCCTAAAGTCACATGGTTTGGTCCACGTGGTGAGATTGACAACTTGAAC
CCAGACTACCAAATTTCACTTCCCGAGAATATTCTAACTATTCCAGCTGC
TTATCCAAGATTAGCTGGCAATTACCGTTGTGTTGTAAAAAATTCTCAAG
GCACAAGACAATCAGAAGGGAAACTTGTGATCAAATGTAAGACTTTTTAt
acgattttttgcaaaaacaaaacagttgACGCTCCCTAACTCTAACCCGA
CGTTCTATTATTTGATATATTAAAAATCAACCATTAACAAGGCTCATTAT
TGGTCTGAGAGATCTGCTATGAAATTCANGACAATCAACCGTTAACAAGG
CTTATTATTGGTCTGAGAGATCTGAtttgaaattaaatgtttttcatttt
agttAATAGCCCGCTTTTGGATAGACTTTACCCTAGATAAATCATACCTG
GAAAATATCTTAGCACCATCGCAACCTTGTTTCGACGTTCATTTAGAATC
GTTAATCGTCGTTGcatcacgttttttttataagaacatccaaaattttt
gaagccttcggatgttcttaactttttaagtttcaagcctaaaagtgttc
ttaacatattttcGCCATTtgttgagtatttttgtccattttcttaacaa
atcgggtgttttagagtttacgaagccttaaaatgttcttaacatgctct
taacattttggccatcgaatccGTCTGTTCTTTTATAATTCTTTtgtaat
ttgtttttattttgtatggggcccccccagcggtttgcgtgattgcgtga
atgggcatttttggttgcgtgaatgcgtgaaaaatgaaaaaaaaatgcgt
gaatgcgtgaattgaaaaaacttgcgtgaacgtgaaaatgtacCTTTTTG
ATTGCGCGGATGCGtaaatctgggctattttgtgcgtgaatacgtgaatt
tccccttttttccaccgattatgtacagttttcccgattttccaatgttt
ccccgatttctcaAACAATTttccgatttctgaaaaattgggttattgcg
tgaaactcaaggaaaatttgcgtgaatgcgtgaatttcgaaaaaaaattg
cgtgattgcgtgaattgagggtccgctgggggggggggctcatNcgtgaa
tgcgtgaatttcgaaaaaaaattgcgtgattgcgtgaattgagggtccgc
tggggggggcctctTGTATAGCTATATACTGTCAAACTCATCCAGTTTAT
GTATTTTCAGCTTTCccaaaatggaagaaaaaattaaaggaCGAGACAGT
TGATGAAAATTCTCAAATCACTTTAAAAGTGGATGCTATTGGATCAGGAA
TACTGGCATATGATTGGTTCAAAAATGGGCAACCTATTGACCGTACCAAG
TAAGAACTGCTTGCATTATAATCACAGCAATCCCACAATCCCAAGGTCCC
AAAAAACGTCTCCCCGCCTATTAATTTTCGAAACCTTATTAAAACCCTGC
CTGTTaattattttagaaaatatttcaagCTTATCGCAAGCTGAATTGCT
CTAGATAGCCTGGTTTTAGCttataattaccttattttggaAGGGGGGGG
GTCTGGACTGGCTTCTCTAATACTATGCCGAATATCAGATACAAATGATT
ATAGTTCTAACCACTCGTATATTTTTTTCCAGTTCAACGTACAAGGTCAA
TGGAAACTCACTTACCGTCAAGAATATTCGAAAATCTGATTTTGGTTTCA
TTCAAGCTTTTGTAAACAATGGACAACAAGAAATTTCTTCCACTGCTTTC
TTAAATGTCAAGGGTAAGTAAAGCAGTTGTACCGTCGCGTAAGATTTACA
TTCCCACACTAAGACTTCACTTTTTTAGCGGAGAAATACCAGAACTCCTG
GTAGTTATaaaagtaaacacaagattttccgttgtttttatttttctctt
gacTGACTGAAGACGACGGTAAATTGCCATTTTTACAATCCTCGATTTTT
GGGTTCTTCCTAGTCGTTAAACATCCTCAAAAGTGCAGATACCCAAACTC
GCTAgtaaaactaataaaatgttTCCTTACTACAATCTCAGGAGCAGAAA
TCCCGTCAGCAAGGAAACTGAAGAAAGAGAAGAAGTTCTATGAATTCTAT
ATTTTGATCGGAATAGCGAGTATCATTCTACTTGCCTTGGTGGTCTTTGT
TTTATACATTCACCTTAAAGATCGAAATACGGAGACTGAAGAACAACAAA
CAAGTTGatggatgaaaatttttttttt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007697TCONS_00007697Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00007697-proteinTCONS_00007697-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000079supercontigsc0000079:104724..108101 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.04	0.16	0.1	0	0.06	0.13	0	0	0	0.09	0	0	11.29	3.43	0.19	0.05	0	0.06	0.09	0.19	0	0	0.05	0.04	0	0	0	0	0	0