XLOC_004307 (gene) - C. hemisphaerica

Overview
NameXLOC_004307
Unique NameXLOC_004307
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000078:614330..617615-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004307 ID=XLOC_004307|Name=XLOC_004307|organism=Clytia hemisphaerica|type=gene|length=3286bp|location=Sequence derived from alignment at sc0000078:614330..617615- (Clytia hemisphaerica)
ATCGCTTTACTAATCAATAAAGTCAAAGTGATAGTAAGCTGATGTTGTTG
ATTTGTGTACAGTTCTCGATATAAGCAGTTCGTGATAGTTTATTACAACT
TTACTTCAAAATGGATCAAGACGTACGAAACAACATGCGAGAACACAACG
CTCATGGCGAACGGAGGGTTGATGAACACAATGCACATGGTGTGCGAGAA
GATGATAATCATCAAGCTGTTGCTGAACTACAAGTGGAAGAAAATGGTAG
TGCGCATGTGCAGAATGAAGTTCGAAAAGTTTCGAAGAGAAGTGATTTCA
GTATAATGTCAACGGAAGATGTTATATCAATTGGTTCTCAAATGCTTCTC
GAAACAGAATTTTGTTCCAATTATGAAAGTTGGTATAATGTTCTTCGACA
AAGAATCGGTGTTAAGGAGACTGTTTGCTCGAAGAACTGTTTAGTCACTA
AACAACGTGACAGTATTTGGGTGTTTTGTATCGACATTGCTGATTTGGTC
AACAATCCAAGAGAATGGAGTCACGAAAAAGTGAGGTTTGCGAAATTGCT
CCATCCAAAGAATAACATGGAAATAAAAGACATACATTATAATGAGGGTA
CTGGTAAATGGTGGACTACTTCTCAGCGTCTACGTGATTACTATGTAGAT
GATTGCGAGTTCGTTTGTTTCGTAATGAAAAAACAATAACTGTGAATGTT
TGTAGATGGTTGAATTTTACGTTGGCGTCATTGAGAAACTTGTTAACGAA
ATCGATATCTTCTTGATTTCCATTTTCATGGTCCACATAGACAGATGTTA
GTGTCCACCGTTGGCAGATTAGTATTCTCTGTAAAACCTTTTGTTCAACA
TTTTGTCACGATTTTTCTTAAAAAAATTATGCTAAATTAAAGTCTCAATA
TAATTTGCAGTAGAGACAAAAAAGCTATAAATTTTGATAGAACTTGAATT
AAATAGCGCTTTTGTGTTTGTTGAAAGGATAATCCGAAGTGGAATATTAT
CAAGAAAGAGAAAAANTGTTCTTCGACAAAGAATCGGTGTTAAGGAGACT
GTTTGCTCGAAGAACTGTTTAGTCACTAAACAACGTGACAGTATTTGGGT
GTTTTGTATCGACATTGCTGATTTGGTCAACAATCCAAGAGAATGGAGTC
ACGAAAAAGTGAGGTTTGCGAAATTGCTCCATCCAAAGAATAACATGGAA
ATAAAAGACATACATTATAATGAGGGTACTGGTAAATGGTGGACTACTTC
TCAGCGTCTACGTGATTACTATGTAGATGATTGCGAGTTCGTTTGTTTCG
TAATGAAAAAACAATAACTGTGAATGTTTGTAGATGGTTGAATTTTACGT
TGGCGTCATTCAGAAACTTCTTAACGAAATCGATATCTTCTTGATTTCCA
TTTTCATGGTCCACATAGACAGATGTTAGTGTCCACCGTTGGCAGATTAG
TATTCTCTGTAAAACTTTTGCTCAAAAATCATATTCAACTGGCATGTCGG
TACACCAGTGCAGGTATAATATAACATTTTGTCACGATTTTTTATGAAAT
TATGCTAAATCAAAGTCTCAATATAATTTGTAGTAGAGACAAAAAAGCTA
TAACTTTTGATAGAATTTGAATTAAATATCGGTTTTGTGCTCGTTAAAAA
GATAATCCGAAGTGGAATATTATCAAGAAAAAGAAAAAGAAAAAAATAGG
GAAATGAAAATGAAAATGAAGAAGAAGAAAATCAAGTTCTTGTAGAATAG
TGACTCATTTTTTTATCAGAAACTCTTTAATCTTAAAACGTATTAATGAA
CTCCCTGAATTGACTTGATAAAGGGCTCTTTTTGTCGTTTTTTGATGGTT
TTTTAAGTCAATCGGTGATAAATTTTGGGCCATATCTTTCGATTGAATAA
ATTTTTTTGATTTTTTTTTAACATTAATGAAATTGTTTCAAGATTAATTG
AAAAAACTACCCCAAAGTTTTAACATAAGAAGGGCGTGTGCCAAATTTCA
GCTCCTTAAACCAATTATTCCGCTCTCTACGCTGTCCCAAAGTTTGTGGA
CAAACAAACTAACTCACAAACATTCTGAGATTCTAGCTCAACTGAAGTTG
AGAATAATTATTATTGTAAATTATTTTGCACAAGTGTCATGCAAGTGCAA
TGCATCACTAACTTTGTCTTTCGCATTATGTTGATGTGGAAGGTTTTAAG
CCATGTGTGGCTCTAGTTGATCTTAATTCAATGACCTACTGTACTGGGAT
AAGCAAAAAGGTCCTTCCCAGCTTGCACACAACGTTGTTTCAACGTTTAT
CTAACGTCATAAGGACGTCGTGGATGTTAGAAAAACGTCGAAACAACGTT
GCGTGCCAGCTGGATTATGCATGTGTTTAAACTGTAAATTTGAAAATTCC
CTCTTGTACTGGTATGTCTGTACTTGTAGCTCCTTTTTGTTTTGATAATA
AACAGTATGATTCATTTAACAGTGTCGTGTTTCTACTTCAGTAGAAGTTT
TTTACAATATAGTTGCGTCATTCGTTATCTTAAAAAAAATACAATGAAAG
AGAGAATGGAAGCTATTGTCTCCGCTAAATGTAACGCCATATACTTGTGG
TTATTTTTATTTGTTTCCATCGAAAGCTTAGCTCTGACACTTTAGTATTT
TTTGTTTACTTTTGAACGTTTTATAAGAGGTTTTTATTTTGTGCGTAGAG
GTAGAAAGCTCATTAAGCAAAGTTTGAGTTTACAAAGTTTATTGGACGGC
TTTCAAAATGGATAATGCGCTACGAAATTTTATCACCACGAACGCACAAG
ACGACATGCGAGAACACAACGCTCATGGTGAACGGAGGGTTGATGAACAC
AATGCACACGGCGTGCGAGAAGATGATAATCATCAAGCTGTTGCTGAACC
ACAAATGGAAGAAAATGGTAGTGCGCATGTGAAGAATGAAATGAAAAAGT
TGAAGAATGAAGTCGAAAAATTGAAAAGAGAGAAAGGCCTTGAGAAATTG
AAATTCGAAAAGGACCAACTCAAAAGTGAGAAAGAAAATGGAGTGTTGAA
GGCTACTGTGGACAAAATGAAACTTGAAAACGAACAAGTAAAAAAGGATT
TTGAGATGGAGAAGCTGAAAGCTGAAGTTGCTTTGTTGAAAACTGAAAAA
CAGTTCGGATTGGATGCGAAAGTGGTCTTAGAACAAAAGTTGAAGGTTGA
GGAAGAACTGAGAGTTGTTAAAACTGAAAATGAAAAGTTTGATAAAGATA
CCAAAGCTTTGAGGGATGAGTTGATGAAATTAAAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007632TCONS_00007632Clytia hemisphaericatranscript
TCONS_00007631TCONS_00007631Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00007631-proteinTCONS_00007631-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000078supercontigsc0000078:614330..617615 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.34	0.17	0.2	0.43	0.13	0.18	0.81	0.9	0.81	0.91	0.61	0.46	9	5.93	2.17	3.55	2.31	4.45	10.15	8	3.62	3.43	1.26	2.29	2.69	2.94	0.61	0	0.72	0.25