XLOC_004288 (gene) - C. hemisphaerica

Overview
NameXLOC_004288
Unique NameXLOC_004288
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000078:526083..530259+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004288 ID=XLOC_004288|Name=XLOC_004288|organism=Clytia hemisphaerica|type=gene|length=4177bp|location=Sequence derived from alignment at sc0000078:526083..530259+ (Clytia hemisphaerica)
TTTAGGACCAAGTCACGCGTTATAGCTTTTGTCGTAGGAGttctgattta
ttttattttctgttttttagCAATAAGTCTTGATTTAAACCTTATGTTCT
AATTAATATGAATGATTTCCAGATTTATTTCATATACACATAGAGCAAAA
GGAAAATATTGTTATCATAATGTGGAGATTGTGTTGCAGTGTTTTGTTGG
TCATTTGTTTGGTGAGCCACGTTCAAGCAAAACCAAGGTATGAAATTTAT
CTTCaattatgttttaaatttccgaAGTTTGGTGCGCGGTAGAAATGAGG
TAGAAAATGCATATACAAAtacaaatccgaccatttttgaagactccagg
CTACCCCAAAGTTTTGAGGTGACAGACTGACAGACTGACTGACTGATATA
CAGACagaccagggatatgttatagcagagctggataacgcacatttaaa
aaagccttgttctatctctgtccctgacattaaaatttgatatgaaattt
aactttttttaattACAAACATGTGAAATTTGGATTTCCTCTTAGCCAAT
GATTCTGCTGCTGCAtttatcgttcacgattaaaaacttttaattatcaa
gagggtctgtaaaacattggtgaatgacaatttaaaaaaatgaaaaacat
tgttttcattagtaataTATAAGATGTTTCTTCTCGAAGAatataaatag
tactttttcatttgaaataccgcgctacacctcGGGGTgtctcactttct
aactgatattttcagatagcaagtcggtatgtctaattatggaaaaaatt
tcaagtcaattgaaacaatatttgtcaaaatatttacatccgaaattttt
aaagagaaatcatgaaagcttctcaaattcataacacacgctgataaaaa
tagatttcatttacaaggaagcttttggggtattttCTCCTACacatatt
attttgatgaaaatcggGAGCATcgtagcaaaatatgtgcaaacgtactg
catgaatactttgtctgcttcatttttcttataaaaacagaacactcaag
gggacagagatggatttctattatgaacagtttacaatagaaaagacaaa
gaagcaatccgctaaggaattctcgtcctacatccagctccgctataaca
tatccctggacAGACAGAgcttctcagattctagctcaactgaaattGAG
AAAAGGGGGACTAGCCAAAAATTAAAAGATGAGATTTTCCCATGTATAAA
AAAGGGGGACCATTTTGGCTAGCTGCTTCTTCCCAGGGCAGTTACGAGAG
AAATGACAAATAAATATTGATATCTTCTTAATtaagaatttgatttttta
tttcatcatgatggatattcttaactttgcggggaaaatcatcctaaaat
attcttaggaAAGGACCAAAACTAAGCCTaagcatttttgtgaaaatctt
tatggcaaattaccttaagggaacttattttggcaggaactaattagttc
ctgccaaaattaaattttttgtttccttccTAAATAACCtctaaaattca
tcaaaattgctcaaaataaggcaaaatagaacagatttacgctgttagga
tatttgctgcccgccaaaattagcgccaaaaaaagttcccttaaggtaca
agGAAACGGCTCTGAAAATGACATTCTTTAGCTTAGGTTCAGTTTCCAAA
AGTCCATGATTGTGGTATTCTTagtacatttttaatttttatggtCAGTA
GAAGAATCGCGAAAGCGTTATCCTAAAATGAGACCGTCTCTCGAATTTGT
TTTAGCAAGGGCCAATGGATCAAAACAATGCAATCATTGAATGAAAATCA
TAAACCTGCTTTCATGGAATATAAAATAGTATATCGACCGCTCGGATGCG
TTAAAACAAAAGCTTGCAAAGCTGTCAGGTAAGAATTAGTCTCCGTGTTA
AAACAGCTACCAAGTCAAGCTAGAAGAGAAAAGAGCTAGTCATATCATTA
GCTTCATTATCTAAGTTGAGTGAAACTGTGCCAAGACTGACATAttttcg
ggtacctaatagccgtcccccccgctaattaatttttcgaaaattttcca
cccaggacatttttattccaactcgctccctgcttattaagttttgagat
tttttccaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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TGATATTTGCAGATTGGAGATGTTTTACAAGTTGAACAAGAAATCTCAAG
GAATCAGTCTTGGCTACAAAACCATTTATGGACCAACTAGCCTTAAAAGA
TAATGAGCTTTTATTCTGCCaagtttatttgtttgttttcaaatttgtaa
atagctaacaaaattttcttgattttttgaaatgtatATAAGGTACAGTA
ATTGATTTAATAGCAAATACGATGTCGTAGTTCTCCAAAACTAAAAATGC
CCCTCTGCTATCTCTTACTATCCTGAATTTAACCCTACACccccaaaaaa
aagaaatcacacaCAAGACGTTTAAAAACCATTTAATAAATATTCTCTTG
CTTTCCGATATAAATATTTACACAAAATTCTAAATCTAaattttcttata
gaaaaattatGCTAAAATATGTTCAAGAATTCCTTGACGTACTAAATGTT
CACATTGCGTTGTTGGGaggaaatgct
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007598TCONS_00007598Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000078supercontigsc0000078:526083..530259 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.71	7.85	2.95	2.56	0	0.12	0.07	0.07	0	0.06	0	0	12.43	9.11	2.75	6.07	0	0.4	33.41	23.43	0.28	0.33	3.71	3.25	0	0	0.32	0.17	0.84	1.04