XLOC_004228 (gene) - C. hemisphaerica

Overview
NameXLOC_004228
Unique NameXLOC_004228
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000077:671364..679141-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004228 ID=XLOC_004228|Name=XLOC_004228|organism=Clytia hemisphaerica|type=gene|length=7778bp|location=Sequence derived from alignment at sc0000077:671364..679141- (Clytia hemisphaerica)
TTTAGACAAAATCAAAATAATATCGATCCAATCAGAAATAAAAAAACAAA AGAAATCATGAAAAGTCTTTTCAAAATCGTCTCCTCGCCGCTTTTGGATT CAAGTGCACTCCATTACAGAGCGTCTATGGTAGAGTGCTGCAGATACATC AGTAAGAAAGCACCTGCGAAGGAGGGCAAAACGCGAATGATGAGGAAAGA TCAGACAGATAAACACACCNAACGAAAGAAATCACAAAATGAAAAATCTT TTCAAAATCGTCACCTCGCCGCTTTTGGATTCAAGTGCCCTCCATTACAG AGCGTCTATGGTGGAGTGCTGCAGATACATCAGTAAGAAAGCACCTGCGA AGGAGGGCAAAACACGAATGATGAGGAAAGACCAAACAGATAAACACACC GAAATAATCGAAGTTGATAAATCGGACAAACACAGATACTTCAAATGGAA TTATCAACCGCTACCCACTCAGACTTCTGAAGGTATGACATTAACGAGTT CATGTATTTGCTCTTCTGAGGACGGTAGAGTGACTGAAGCGATTTGGAAA CAACCTACAGATTTGATCTGCAAAATCAAGCGTCCTTAGTTGATCAGGAT CTAGACGGATCTGTGCGACCTAGGGGTGAAGGTACTTGATTGTTCCATCT TATATTCTTTGAATTTCTTTCTTTCTCTAGATGTTGTCAATCCGCATTTC AATATTCGATCACCTGATTTCAAGCTTCCAAATCCACGCGGACGTCTCGC GCGCTCCGTGTGGCGACAACGCATCGCTGAAGTACAAGCCGCGCGAAATG ATCCAGAACTAGAAAAACTGTCAAGACACAGGAAATGTATGATAAAAATA TTTTTGTGCTTTATTGTATAACTTCTGAGAATTTGAAAAATGCGTAAAAA TGTCTTAGGAATGTGTATCGATCAAGAAATTTTGAACGATATACTAGACT TCTCCTGGGCAAGTTCAGCGTTGATTCAGCAGAATTTGGCAAATAGTGCA ACTGCCAATTTTTTAGCCGAGCTTTGATCCCTGATACTTTGTGGTATAAC ATTGGCACTTCCAAATAGCGTACCATTTGATAGGCTTTTTTCACACCTCA TCATTGTTCATCGCAATAGGACAATCTTAAGCTTTTGCTCATCTAGCGAA AATAGTTTCTTATAGGCCACCATTTTGAACCACCATAGCAGCGGGAAGGC AAGCAATACGCTATTAAGTAGACCTATATATAGGGAATAGGCGTAATGGT GGTCATCGCATCTTGACTCCCGTCTGCATCATGGTATCTGTGTCATGGTA TCACATAACCAGCGGCGTCCGCACAGCGTTATGCGTTCCGACTTGAAAAA GGAGGAATTCATACTTCGTAATGAGTAGGACTCATTCTCCAGTGGGGAGG GCTCATATCATCATATCATATATAGGAAATATATCTATAGAGGTCTGCGA TTCAGACTAGGACAAGCTCTACGGTTGTAAACAGACAAAAAAAGCAAAAT GATGGAGATATGGAAAGTGTAATCTATCAATTTTGAATCTCATAACAGAC CATCCATCATACCAACTTAATTTGGCGGCGATGGCCAAGTTGTTTGAGGC GTCAGCGTTACAAACCGTTCGAATCCTCGCTCCTTCCGATGCTCCGTTCA GTTCGTAGATAGATAGCCGAGCCGGCTTGCCGTGGACGCAAATAGACGTA GAATCGAACGACTCCACAAATCCTAAATTACGGGGCTTTTCATGTTAATA TCGTTTCTTTAACCCAAATGTCGATGGGGAGTAATATTTAAAAGCAGGTT AATCATATTCAATACACCTTTTTGACCGTAGCCGCCAATTGCCGCGCGGG CATTTTTTTGTCCGCTTTATCCCACTAAAACCATCCCAGTCCTTTTTTGA CACATTTTTCTATTGTCTATAGGGGCGAAAAAGGATTGGGACGGTTTCAG TGGGATAAAAATGGTCGAAAAAGTGAATTGTCGATTTACGAATTTTTCTT ATTTTTAGTATTTCTACCCCTGGAGGAGATCGAAGCCGAATGGAAGCACG AGTTTGGTATTCATGACGTCAACAAATTGATTCGTTTCAATCAAATATCA CGTGACTTGTTCCATTCAGATGACGTCATCATGAATACGTGGTTGGATAT CGCTTTCACGGATGTGAAAATACATCGAGGAAATTTGGTTCAACCCTCAC AAGTAAGTCTTAATCTCATTACAGGTCATCCATTCTGCATATCGCGCTCT GCTCTAAAAGGGAAACGGCGAATGTAACGATCTGACCTGGTTGTTCAGCC AAAAACCTGCTCTTTGCCTGGAAACAAGAGCGACTTGGTTCTAATTTTTA TGACTGTGATTGGCTTTTGAATTTGATGCGATTGTTTTGCTTTAGCCAAT CAAGGCGCTCAAATGCTCATTTTATATTCTTCTCAAATCTGGACGAGAAA GATCAAAGCGGTACGCCAACCTGGGCAGATTCTCTTACGGAGCCATGTCT TTTAGAGTTAATATGCGCCAGTGTGAGTGAACGGGGAGTGTGAGAATCTG CTCACAGATTAGTAAATTCTCTCTCGACTGTCTTCTCTCTGTTAGTCAGT GAAGGCGGTTAAGGGACCCATGGCTGCTTGTGTGATTTCGTGGTTCAAGT TACAGTTGACTCTCTCTAAATCGAACTCGAATTGGGAAATCAAGTTTGTT CGAATTATAGAGGGAATTTTAGGAGTGTTTCTTCTTGACGGGACGCGAGA ATCGTAGAAAAGTTTGAATAATAAAAAGTTGGAGAAGCGAGAGTGTTGTT ATCATAATTGTAATGAGAACAAAAGAAATGGGCGTGGCAGGTGGTGTGAT TAAGGGAACTGTGCATAAATACCCCCAAAAACTGCCCCATATCGGTTGAA TGTATAAGAATTAATAATTTGGTATTTGGGACTTTTATTATCAGCATACA CCAAGATGATGAGGTTGGTGAATGAGATAATTCCGTGACTATGAAAATGA TAAAAAAGTTTCCTTCCGTCATATATATCTGTGGCTTGAGAGGTCAAAAC TTATCCTCTAACCGCTTGCAATGACTTGTTTAAATTACGGATGAATATCT ACTGTTATGATGGCACATTTTTTTCGCAATCTATGGACTGAAAAGTTCTT ACCATATATTTTTTGACCATATTATTACTTTAGCCTAAAAAAGAAGATTA AAATCACTATCCCTTAATCGTTTCATTCTGATATTCAAGAAAACCTTTAA AGAAAACAAGGAAATTTATGGCAAGTTTGAACGAACTGCGAAATTCATGA TATGCACCACTGGAGAGTCTTCTGAAAACTTTTAAAATTGTCCACCCAAA ACGTCACTTAAACAATAGAATAGTGACGTATTGGGTGAAAAAAACAAGGC ATTGCAGTGGTGCATGCATATCATGAATTCTAAAATTTCACTAGTTTCTC TGTATTACAAGTTTCTTTATCTGTAACCTTCTTTTTTTTAGCTTCTCACA GCACCTACTTCGATATCTTTCACACCAAAGGAAGGTCAACTGTACACCCT CATTGTCAGCAATCTGGATGGTCATCCTGAAGGCACTGGGGACGAGGTTC TACAATGGATGGTGTATGATAAATTTTTCCATTTCCAGTTTTTAAGTTTC TTTAGTTTAAGACAACGAGTGATACATGTTTTTTCTAAGCATGTGTTTAC CCACCTCCTATATCAGGCTTGCATTATGCTTAGCATTCTATTGTTCTTAA ACAACAGAGCTATTGTTTAGGTACCAAAAACTGAGCCTGTATAGTATATG TTTATAAACGATATTCTTATTAAAAACTATTTCCAGATATCTAATTTGAT ATCTTTAATAGTGGATTGTCACATTGAATTTCCGTTGTTTTGCCGTCCAA CGTCAATCCCTCAGTACATCTTTGAATTAGTTTGAGGTTTTTTAAAATGG GCGCTTGTCTCACGAGAACTGGAGTTTTAATCAAAATAAATAACTAGAGA ATTTGCTCAGAATTATAAACTGTATCTAAAAATCGTGAAATCAAACCGTC TGACTTATAACAAACTTGATATTTTTCTCTTGACTGGAATATATCCAGGT TATGGGGAAATAGGATGCGGGGAAGTGCTTATTCAAGCTCTGGAGAGAGT AAATTCAGTAAATTTTGAAAATTGTATCTGACAGGGTTGACTTTTGATTG TACCTATCACCTTTTAGGACAAATTTTGCGTCTGATCAAAGTGTATTATG TTATTTTTTATAGTTCCAATATTTCAAACGGTGATGTCCAAAACAGTGAC ACCATCTTGAATTATTTACCACCGTTGCCATGGCAAGGTACTGGACATCA CAGACTAACCTTCACTTTATACCATCAAACTGAGGGACGGGTACAGGCTG ACCCCATCAATGAACAAAAGTAAGTCGCGAAAGTCCATCTAGAATTCAAT GTTACTACTCGAAGACGAGGCTCGTTTTTTTATGAAATAAATAAGTTTGC GCATTCAATCAATCAATCAATCAATCAATCAATCAACCACTCACTCACTC ACTCACTCACTCACTCACTCACTCACTCACTTCAAAATTTTGAATCACTC GGGTCACTTTTTCATTTTTGAGGCCTTGAAACGAGTTTTTTCAAGGTAGG TTAAGATCTAACCTTTCTTAATGATTTCACAATTGAGCATAGAAGTGATG CAAAAACATAGTACCAGTGTGGGCCTTGAAGTGATTTTTATGATAGAGTC ACCTTTCAAATCACACAATTACGCAAAAAAAATCAATATCACGTTATCGT GAGTTAAATTTCCTTTCTATCACGATCATGTTGATCACTTTGGTTCCCCC GAGCAGGCAATCACGAACTTTAAATTTTTAAATCACGAAATCACAAACTT GAAAAACGCCAATCACGCCATCACGAAAACTACTGGGGGCCTCATGATAT ATGATTAAAGGTTTTTGTTTTTAAATAAGAGTGATATCGCTTGCTTACTC ATCAATTTTGATTTACAAGCTTTTTCACATTGAATGAACACGGATGTGGA GCAAAATTGGTCAAAAAGAGGAAAAGAAAAACAATTTTTTGCTTATATCA GCATAATATAACAATAGGCAGACACTGTCCTGGTATGAAATATGTCTGAT ATGAAACGGGAACACTTATATAAAAACAAAACCTTCAACAAGTTTGAAAT TTCGTTTTTCTGCTTTCAGTATGTTGAAGAACAGATGCATGACGTCACAT GAGTTTGCAACAGCCAATCACTTACTTCCAGTCGGTATCACGTGGTGTCA AGTCACGTGGGATGAAAGTGTGTCTGAAACATGCAAACTGCTCAAAGGTA CTTATTTATCATATCATTGTTTCATCCCTGATTTAGGTTCCTTTTAGTTT TATAGCTTTGAGTCTACTTCTGACCTAACTTTGCTTTCTGATGACTTTTG ATGGTGCTGAGTCTAGTTAAAACCTTTTAGCGGCAAACAAGACATCTGAC AGCCTGTCTAAACGCGTTAAGGCTTGGGGAAATGATTCTGATCAAGAAAG TTCCTTCTTCTGATCATCCTTTTCATTTCATTTTTTGAAAAAAAGATTGT AGAGCAACGAATTATTTTGTTCCAGACTAAAGGCTTGGGGACACGAGAAG TTTTTTTCGCGTTGGTGCAATGCAACATTCTCTATCCCACCAACACAAGA AAAAAAGTGCGTGTCCCATGGTGTCTTTTTTGTTTTATGGGACAAAGAGT GAAGGAAATACCCAAAAGACACACTGATTTTGTCCCTGGGACAATGGAGC AAAATTTATTTGAATCAATTATGCTCCATTGTCCCAGGGACAAAAGTGAG ATTTTACTTTTATTGGTAGGAAGAAAACGAGGTGGAGACACAAGAAAGCG TTTCAGGTTGGTGGGATGGAGAATGTTGTATTGCACCAACGCGAGAAAAT CTTCTCGCTTCCCCAAGCCTTTAGCCTGGAAGAAAATAATTTATTGCTCT ACCGTTATTTTTTCAAACAATGAAATGGAAAGGATGATCAGAAAAAGGAA CTTTCTTGATCAGAGTGGTTTCAATGACTTTATATAATTTCGTTTCATCC ACTGACAGTCCAAAAATCATGACCTAAAAGGAAGTTGTGCGCCAAATTTA AGCAACATTTATTTTCTTTCCATGCTAGGGTTATTTTTTAGCTAATTATA ACTAGCTTATGACTGAATTTTAATTTTACATCGTTTTTTATTCATAGAAC TATATTTCACAGGTCTATCGACCTCTACGAAATGATTTTAGATTTATAAA ATATTGTCCAATCTTCATCTGTCGTCCAGTCATCAGAAGATATGGACAGA GCAGGCGTAGTTTTGGTCTTTGTCCTAGCTTTTGCTTTGAAAAATAAAAA TTATATCATGTATGGACTCACAGTGGTATTCTAGATAACTAGAATTGGCT ACGGACAAACACTACAGTTTGCAGACACTTTAAAGGATTATAGATTGTTT ACATAACTGACAACTTTTTATTTACATGATAAGCTTTCGGAAAGAATTCT TTGTTTGTTTTTGTTGTCAAGTCAGCGTATCAACTAAATTACGTAATCCT TGCAACAAAAACAAACCATGCAAACACCCGGCGATCAGTGCGGAATTCCG CTGATTAAAACGAACCGTACGCGTTTTTTATATCAACGAACAATATTCGT TTGCCAAAATATTGAGAACAAGTTAGGAACATTTTAAGGCTTTGCAGACT CTTAAACTCCCAATTTCTTAAGAAATACACAAAAATACTCTCGAAATGGC AAAAATAAGAAAAGGTTAAGAATGTTTTCACTTAGACTTCACATTCAAAA TGTTAAGAACATCAAAAGGCTTTAAAAGCTTTGGATGTTTTTTTTGTTCT TTTAAGAAANCTTTTTTGATTTTTGGGGCCTGGGACGAGTTTTTCGCCAA AACGAGGCTAAAACTTTGGGGCAGCCTGGAGACTTCAAAAATTGTTCGAT TTGGCTGAAATTTTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNTTGTTCCTTGGGTGAATATCTGGGGGTCTACAATTGGGCCT ATGAATAATTTGAAGCCACTGAAGTTGAGCCCAGTGCGTTGCGCACGTTC GACTATTTTTATAAGAGCCTTCCAATCAAAACAAATGTTTTTTTTCTTTC CATGAAAAATAGGCTGATTATGTCAAAAACTTTACAAACATGTAAGAAAC ATGTAAGGCTCAAAAGGCCGATTTGTTAAGAAACATTGAGGCTGCTTGGC AAAATTAGTTTCTTAAAAAAACATGTATTCAAATCTTTTTCCATCTTCTT CTTTTTACAGATTTGTCTGGTGAGCCTGTGTTTGAAATGGAAGAATATCT CGAGCCCAAAGTTGAGCAGGAAATGTTGATGAGAAAATGGAGTGAATTAA AATATCGAAACATGTAACGAACTCCCTGTGAAAGTGTATACATAGTTATG TAGTATTTTTATATATCAAAATTTATCACTTAGAAAATATTAAATTTCAA AATTGAATAGAACCTTTTTATTTGAATTCAGTACTTTAATGGGATAAACT TTCGCAGGGGATTAAATTTCGCGGATTAGGGTGTCATCCACGAAAATCCG CGAAATTCTTAATGGAAATTTGGAAGGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007496TCONS_00007496Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00007496-proteinTCONS_00007496-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000077supercontigsc0000077:671364..679141 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
MRPL3839S ribosomal protein L38, mitochondrial Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
40.71 39.49 9.96 7.31 19.24 16.99 24.02 27.1 20.1 24.39 20.78 20.93 20.36 22.02 26.8 28.72 36.04 41.37 13.78 9.44 20.33 18.98 55.64 48.62 43.87 37.06 11.39 11.93 26.07 33.79