XLOC_003337 (gene) - C. hemisphaerica

Overview
NameXLOC_003337
Unique NameXLOC_003337
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000061:446657..450112+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003337 ID=XLOC_003337|Name=XLOC_003337|organism=Clytia hemisphaerica|type=gene|length=3456bp|location=Sequence derived from alignment at sc0000061:446657..450112+ (Clytia hemisphaerica)
tttttagaCTTAAATATCTAAATTATAAAAGATTATATTTTGATTGATCA
ACAATGGATGACGAAGCTGAAGTCTACAAACTATGGAGAATTCGTAAAAC
TATAATGCAGGTATCGtaaacttgttttcattttaaacatatcaatctat
tttcaaaatcatGATTATGGCATATTTAGCTTTGATTCTTTGACTTAAAA
TTGAATTGGTAATTTTATTGAAATCTCAATTCAtatattttcctttttga
tGTCATTTTTAAACAATCTCTAAAATTGTTTTCAATTGTACGAGGAGCTT
GTCACAAGAGTGGCCAATTTGATTACGTATGTGTTTGCCCAAAAAGGTTT
CACTGgataaaattgtgaaaaaaggTTTGGGTGAGTTGTCAAATATAGAA
GATTGGGTACGTATGTGTTTCTAAGAATTACAACACTTCTAgtgattttg
tttgttttcagatgTGTCATGATCGTGGTTACTTGGTCACACAAGATGAA
TTGGACCAAACTGTTGATCAGTTTATTGAACAGTTTGGTAACCGCCCAAG
GTACATAGTCAAAATTGTTTATGGCGTTGGTTCACTGGAAATATTCAGTA
ATCACCTGGGTGGGAAAAGCATTTCACACCTTGGAACTTGAATGATTTTC
CACCCGGGGGAATTTTTTGCACGTTTCAAGGTGTGAAATGTACTTTTTAC
ACCCAGCGACCTGCTCATAGTTTCTTGTTGTTTGTCTCAGTACATTCAGT
TTACTTCTTTACTTCAGCTTTCATGagaaaaaactggaaaaaaaagaaag
ttataGAATAAAACTATACGTGCTAGTGTACCACTTAATTGTTTAATTAC
CCCCCTAAAcacgatccaatccttttttgacaccttttacTATTGTATAT
ATGTGCgtaaaaaagactgggacggttttagggtggtaaacggacaaaaa
atgccagcgcagcaattggcagctacggtcgaaaGGTGTATTATCCTATC
ACttcattttataaaaattataatttaaatcacagaaaatcaactttAGC
TTTTGAGTCTTATActcgctttttcttttataagaagatactttataaga
atatttatgataaaattagcaaaaaagaaattaagaatatgctaagaata
ccacCATAATGGAAATTAGCTATTGAACCGTTGAAAGCCAATTCTAGATT
TTTTTCCCAGCAGTGCTAAAatgtttcacaaaaatgccaaattttagcTT
GAGGTAAGTATTGCATGCTAGATGTAGGCTTGGTTTGGATTCTAGCccaa
gaatactgtaagaatatttcaggatgattttccccaaacaGTTCAGAATA
CCCACGATGAAGGAAAAACAACATTCttcagtgttaaaagttcttccgtc
tcagacggatttccgtctcagagaagttttaaaaagcaaatttcGACTCA
AAActctgcataattcaccaaaatctCAAGATAatgtgctaatttgctgt
gtaaaatccattttccgtctcagacgaaagactttgctttgaccactgat
tcttataaaaatgcgtATAACCAAGGAAattgttttccaatttttttagt
GAAGGGAGACCATCAAGAGGAGATATGTCTGTACTTGTAGCGCATAATGA
TGATCCGACAGGTATTTTTGCTTCATTTAGCACCTATGAAATGNtctcga
gattttctcattagttttttgcgattttttgcacatagatgcacattagt
actgccgaaaaggtgtcgaaaaccgtttgtcgaaaaaattttttttcggt
ctgtagaaccggaaatgtgccggaaatcgtcgttttttNTAGATGGCAGT
ACATCCTTATAGCAAGGCGGTTTTggtgttttgataaaatgaatATTCAA
CACACTTTCTGTCCAGTCTACTAGATTCACCCAgcttattggacctaccc
cggtggaggtcctataaattaacccgtgttcgttagttcgttcgttagta
cgttagttaccaacttttctcgNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNtagcattgtttgatttccaaaaa
aatcatcctttgaatccggaactccttagaaatcgccggaacaggcgaaa
accggcgtaaaacggttttccttcattttttcgacttatactcgacagat
tttcatgatttttcgcacaatgatgtaaaatggcaatgcccaaaatgtga
cggagccgaGTCTGATTCCTTTAAAACGGAATTTTTATAAGTGTGGTTGA
TCCTAAAGCAATGAAGCGAGAAGTATAAATGAGTTTTAAAACCAGGACAA
AATTCCGGGCggaaataccggaaatatgccggaaatcacagTTTTTGGGT
ATTTCGGTCAGCATTTTAGAAACAGTATTAGAAACAGTAATGGTAAAGCT
TTTAGAcgtatttttatgattttcacaATAAACAAGGGTCAAATCCATGG
TAAAAGCCATTTTTCGATACGTAACTGTTCAAAAATTACCGGAAATAGCC
GAAAATGCtagtttattattattttttctaagagaagaaaatgtcacgtt
agagtgcgacggtttgagttttctggaaaccttatttattaagctgtgca
tttttctgtcTGATAGTggatagtggtttttataaagaaaagcgcttaat
agcttttttatttatttttcaaaaatctttttcaatagtgttgatagttt
ctctcaatagatatgctttcatNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNtttattttttgtattttgaccagttatgtct
tatgtgtttcattgtttcaatgttcactgattagtttgataaccaggtag
gtccataaaagtatcgcttgttaaCACTGAAACGAGTTAAAGAAATTGAA
TATAGTACCCTCATCAGAGCTAcgaaaggttgaaattttattagtttaaa
gatattctttgttatgatatagaaaggagacgcgcctctatgctgacaaa
gcataaAAAACAATGGGATTCCTNttaaagatattctttgttatgatata
gaaaggagacgcgcctctatgctgacaaagcataaAAAACAATGTGCTAG
CGCGGCGtggaagaaagaaaaagttgttctttcttttgcttaaaaaacgc
TGTATAAGCAGTTATAAACATATAATGAAATAGAAAGTTTGAGCATTAAT
GGTCTCTCCGCAACTCTTACAATATCCGTCTTTCTTTCCAGATTTGATGT
TTGTATTTTTCCcagaagaagaaaaagttgGAATCAAAACCATTAAACAG
TATGTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00005846TCONS_00005846Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000061supercontigsc0000061:446657..450112 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
36.69	30.75	142.47	143.08	89.14	64.3	104.08	105.11	78.95	83.55	74.65	64.62	53.04	45.86	54.75	56.91	105.84	93.79	24.17	27.66	55.7	58.34	51.11	38.56	56.32	72.34	31.18	21.3	33.65	31.55