XLOC_003283 (gene) - C. hemisphaerica

Overview
NameXLOC_003283
Unique NameXLOC_003283
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000059:699007..708053-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003283 ID=XLOC_003283|Name=XLOC_003283|organism=Clytia hemisphaerica|type=gene|length=9047bp|location=Sequence derived from alignment at sc0000059:699007..708053- (Clytia hemisphaerica)
TTGCGTCATTCGGTCACACAAACAAACTCTTCTTCAAATGGATTGAACTC GTTCCTCCTTCAAAATGTCCAGATGATTACAATGGCTTTGAATATAATGC ACATCATATGTATAAGTGTGAAGGCGATACCAAATTGCACATCTTTGAAC AAAAGGTAAGTGGTTAGAGTTACAACACTTTCGATAGGAATATGTCTAAA GACGCAGGCTAAACTTTGACAACGCGGTCGGGTCTTTAGAGACTGGTAAT GAATTTAAAATGCAAATTTGTTCTCGGCGCACGGCATTTTTAGACCACCT CTAAAACAAACTTAGCCTATCTCTATCCCAACACGCGATTTTTTTATCAC GTTGTTGAACGGTGTCGAGGAAAAAGCCGTGGTGGTCTGGTACAGGCAAA AACAAACCAAGCAAATTCCCGCTAAAACTGTTTGTCTCTACTTTTCCCAT TATCAAAATTATGAAAGGCAAAAAGTAGTTGAGCTCCAGCTTCTGGACTA TGTGAGAGGTGTTTCCGTGAGTCTCTGCGATGGAGTGGAACACCATTCTC ACTGTGTAATAAAGACTCTTTAGGATCTCCACTGAGTAATTTGAAATGTA AAATAGAATTAAAAGCCCTTTTCACCTATTGAAAACGTTCGTTATTGATT TTCAGTCTTCGTTGATATTTTGCTCCATCATTCTTTCATTGTTGGCTAAA AAAATTCTCACCGAGCCACTACGCACAGGCATATAATTTTAAAAGTTCAA CTACCATGATTATTAAGATGTGTATTTATTTTTTAGAGCATAACTAGATC AAAGTACCTCACAAGCATACCAGAGTATCAGGTGAGTGAACCTCAGTAAA CTTAAAGTTTTCAAACTCCATGATTAATAAATGTATGCAAACCTACAGTG TGTCCCGAAAAAAGCGTACAAAGTTTTATAATCCTCTCGTATACTTAATA TTTGGTTCTTTGAAGTACTGATTTGATTCTTAAATTCCTTAAAATGCGAC CATTTCCAGGCTTAACATTGTTCTTGAATTGTTCTTATTTTTCTGGAGTT TTGAGTATCTACGTTCTTATAGAACCTCCTCATAGAAAAGAGTATAGTGT ACTTGAGTTGTGCAGCCTCTTTTTGGTAATTTTTTACTCTTCACAATTTC TTTAACTTTTTACAGCGATGGGTTGTTTCAACTGCAGAAGTCACCAGAAC AAATCATCCAATTAAATCATGCAATACAAGTTTTTGGGATGATGAACTGA AAATTGAAGTTAAAGACCGTAAGAACATCTTTGTGGGTCAGGAGATGCTG GTGTGTGTACAAATAGGATCTCCAAACCCTGCCCCTTAGAGAAGCAAAAT TTTTAGTTTTCGTATCCTTAAATATAGACACTAAAAGCAGAGACTCTTAG AGAGACTATTTTGACTTTTTATAGAGACACTTGGATGACTTACTTCCCCG CTTAGATGTCTACTTTTATATTGTCACCGCAAAAATTGTGATCAAATTTT TAAGTTTGTGACTTTGCATAGGACGCTTCAAAAAAAAACAAGACGACTTA AAGTCGAAAATTTCGCATAATATTTGAACATAAACGATCAGCATTATGCA TTATATATTTTGAATGAAGCGTTACACAAANNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNTACACATTGTATTACAGGTCGTAAATACCCTGTTTT CTTATGAAAAATCTCAATCCATTAAGAACAAAAAGATTCCTAAAAAAATG CGACTAAAAAATTCTTTTTTATATATAAGCGTAAAAATTCAGAAGAATAA TTCAGAGAACTGTAATAAACTTGAGAAAATGAATTTTAAAATTCTTTGAA AATGAAGAAGAAAAAAAGAACTTTTCATTCTTTGATGCNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNAAAGCTGGAAAAACTTACTTACCAAACCCATCGAACACCGAT CAAACTTCATCGGATAAAAAAACTGTCATCAAACTTATATAATCAAACTA ATCAAAAAAAATTTCTTACCAAATAAGGTTCGGTAATCGAACAGCTATCG TTTGATTTCGATGGATACTGTGAAGTCCCAGTGAAGCCGGGTATAACTTG CATCAGTGGAGGGAAACTTACATATAGCCATCAAAATTTCAAAACAAAAG AACTGCACAGCTCTGCTCGAAGCTCTACGCTACCATTTAACTTCATTTGA GGGGCTATGCATTAGCCTCCACTGATGCAAGTTACCCGATCTCACAGTAG TTTGACAGTTCGATTACGAAAATGATCGCTGAATTTCAATTAACTTCTAA AGAATACTTGCTAAAACTGACTGTTTGTCACAACTGGTTTCACTATTAAC ACATTACTATCTGGTAAAAAAAGGAAAAAAATATCATACCTGCGCTGTTC GTAGTTTTAGAGTGAAGAAGAGGCAGGGTTTTATGTTGTTGTTGTGAAAA AGTAACTCTTTTTATTCTACTTACTGAGCATTATCAATTTATTGGTGCAT TCAGTAACTACACAAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNTATCGAGTACTTTCGTTTTCTAATTTTTTTTCCGAGGACACCGCCGC CGCCACCGCGAAAGGCTATCGTAATACTTCGCTAAGCGAAATTAAAAAGA AGTTCCAAAATGGGTGTTAATTAAAAGAATGATCATAATGTCTATAATCG CACGATGAGTTATTTTTTCTCATTTGGCGTTCCTTCATAGAGAGCAATTA ATCGTTAATTGCATCCTGTAGAGAGCAATTAATCGTTATTCACACTCTTT AATGCCGCACCAATGTTTACAAAATTGATTAAAATTAATAAAAATTAATA GCAAAAAAATCACTCGTGCAATTATATTCGAATTGCACTCGTTATCATGT GATTAAATGTACTAATTTTTTTATAACCACGAACAATTTAGAAGCGCTCT AAATTAGGTTTTGGAAGGGTAGAGTTTTAACTGTGAGTTTTAATGCTAGA CTTTAAGACTTGGCACCTTAGTATCTGAGGATCCAAAAGTTCAAAAATGG TCCGGTAGGGCTTGAAATATATCCTAGCTAGAAACCAATAAATCCCTCCC AGATCGAAATATTCGATGAAACCAAGCTAAAGGCCCGAAATTGACATTCT CGCTCGAACTTCAATTTTCGAAAAATGGTAAAATATTATTATGGCACTGA TTGTAGACATAATACATCTTTCTTTTTTAGTATCGACATATCTACCCAAT ATCAAATGCTCAATTAACAGGACGTTTGTTACTGTCCTTTGGCATATANT TTAGTATCAACATATCTACCCAATATCAAATGCTCAATTAACAAGACGTT TGTTACTGTCCTTTGGCACATGGTAAGTTTTGAAAATGTTTCATTGGTTC GTTACTGATAACGTCGCAACGTTAAAAATCTGAACATTTCAAGGAAGCTT AAGATTATGGCAAGAAGTAGTTCTAAGGGCTAAATTCACCTGACGCAATA CGTGGTTACGAGGTCTTATTTCTAACATAAGTGTTTCTGTTTCATATCAG ACACATATCTTATATCAGGCCGGTGTCTCCCTATTGATATATTGTGCTAG ATAAACAAAAAATGTTTTTCTTTTCCTCTTTCTGGCCAATCTCGTTCCAC ATCCATGTCAATTCAATGTGAAAAAGCTTGCGAATTAGAATCGATGAATA AGATCTCTCTTAATATTAAAAACAAAACCTTTCAACTCTGGAGCGACGGA TGGCGTTCTGAATGTAGATTTAGAGCTCTATGGTGTGAAGTCAATTGAGA TGTTTTTTTTTGCATTAGATTAAGGTTATTTTAGCACATTATAGCGAGCA AGTAGGATATAAATTAAGGCTTAAGGACCCTATTATAATTAAAAGTAAAG CCGATTATCGTTTTTTCATATAGGAAGATGCTCTTCAAACAAACACAATC GAAGAAAAGGTTCAACGCTATTCACTCTTCAACGTAAAAATATTCGCACA AGACAAATTAAACCACTCGAGGAATGTTTTCGATGGTTATCTATCAACAA GACAGCGTCGTTATGAACATCATATGAAGAGGAATGGAACCAAATCTTAC ACTTTATACTTCCACATGTGCGTGAGGAGAGCCACGTGTACGCATGCGTC AAAATCTTGTGTTATGAAGGTGCCGAAAGATATAAAACCTAAATCAAAGG GAAATGAGAGCGCCGTCTATGAATGTAAGGATTATTATTTAACAAAACAG TCGGTGGTTGCAACTCGAAGGTTCCTTTTTTGATAGCTGTCTATCCAAAG GTGGAGGATGGGCGAATCTCTTTCACAATGGATTGCTTCATTTACCCTTG ACTGAATCCTCGAAGTTGCGCACTGTCACCAAATGTTGCACCTTTGCATA CGGTCGCTTTATAATTATAAGTTTTGAAGGTTGGACTTTTTTCAAAGAGT TGCCTCATACAAATGCTTATGGAAAGAAGGTCTCAATATGGCGAACTTTA AAACTGGAAGACTTTCACGGGAGCTCTGTAGGTATTTAGAATATCTAGTC TGTAAAGTAATATGATATCTGTGGAGCTGTAAGATCTAGTTTAGACGGCC GATTTTCTGCCCTGTCTATTCTAATTGTTAGAGTAGACAGAAGTTGGGCA AAAAGTTGGCAACTGAAATCTTTGCTTGGAAAAGGTTGAAAGAAGACATT GCATTGACGTCAATAGAGGGCAATGCATTGACTTTAGTCAGCCCACTTTA TGCCAACTTTAATTCATAATTAGAATAGGCAGGGCGAAAAGTGGGCCGTC TAAACTAGAGCTAAGTCGTCTTAATTTCTCATTCAGTGGATGTGAAAGAA ACATTATTGATCGTTGGAGGTTCGGTATCTCTCATAGCTGTTGTTATGTG CATAGTGTTTTGGAGGAGAAGACAAATGTTAAATGAATCATGCTGCTCTT ATCGCAAGAGGTAAAGTTTTCAAGACTTGCTTCATTGTTTTTAACGTTAT GTAGACAAACGTTATATAAACATTGTTTGACGTTTTGTGAGAGCCGCGGG GTAGTGATAAAAGCTAACATCTTTCAAAATTCGATTTTACTTTACTTTTA ACAGAAAAAAACATGTCGCGTTGCTATTGAACAATTACTGAAAATATGAC AACGCAAAGTTTCAAATTATAAGATGGCGGTTCAGGATCTTTGGGCTTGT TACATTTTGGGATACAATGAGACGTTGTTCAATGAACTGGTTTCATATAC GAAAAAATTCCAACAGTGTACTAGAAAGGAGTCGTTTATAATCAGTATGA TACAGTAGCATAACTGTTATATGATAGTATGATAATTGTAACGGGGTATG ATCAATTTGTATAAGACCATGTTCGTAACGTTTACGATTCCGTTTCGCTA CGAAACGAAATGAAGCAATTCTATTGGTTAAAAACATAAACCTTGAATGT AACCAATAGAATGGCTTCATTTTGTTTCGGTGCGAAACGGAGTCGTTACG TGCGAATGCGGTCTAAATTAGAATTATATCCCTTCCATTATGTTTTGCTT ATTTTCTACTTTCGATTAGTATATACAAATAGTGTACTTTGTTTCAGGGA ACCAACGGATAGCGATCGACCTACAATACAGCCAGGACGACCCTGTGATG GACGCCCTCTTCCAGAAGTACCTACTGATACGCAAAATAACAACACTCTC AATCAAAAAGTCATTCTCAAAAAAGGTGAACTACCTCCAGGTTATAAAGA CCCGGACCAACCGGACCAACAGCATTATAATGAATTAGAGACAGTGGGAG ATGATTCAGCTTCCGGCAGCACACCAGATATCAACAATATTCACGATTCA AACGAAACCACATTTTCGCCAGGAGTCTGTCAAGACTATCAAAAATTAGC AGTACCATATAAGGAATCTGATTTTAAAAATTCCTCTGATCAATTAACCG AAAACGAACTTGAGACTTCAGTAGTAGGAGAGAAAAAGGGAACCTTAGGA ACTGGTTACATACAGAATACAAAATCCGATACGTCAAAATCTTCTGAGAA TCAACCAAGGCTGACAGAACCACCCTGCTGCACCAGGACAACAGATACTG GGGACTACCAGGAATTGACGAAACCATTTTCCCAATCAAACACTGGAGAA ATATACAACAAATTAGTAGTAGAGCAACAAGGTGAATCTAACAAAGAAAA TAGCCAACATGGCCCATTACCAAGTATGTTCAGCAATAAACCTGTTCCTC AATGTAGGTCAAATGACTCAGTACAGCCACTTGATGACAAACTTTCTCCA CAAGGAATATGGACTGGGGAGAACCAATCAAAACGTTCAAAGAAGAAAAC AAAGCAACAGACTCATCATTTTGATACTTCTTTAGTGGACTCGTGTGGTA AGTGGTTCGAATTTTCTCCAATGAATATGGAAATCTTCTATATGGGGCCG AATTTTTTTGCATAAGATATAGCGGTTTGAAGTACTTTAAGGGCAGAAAC TTTCGCGTTTTTCGCGATTTTGATCGTTTTTCGCGAAAATTTCTGCCAGG TAAGAAATTAAACCTGAAAAACGCGAAAAATAAACTTTCCTACTCAGTTT TGCACTGTCTGCCAAATTTTTGCGTGTTTTATGAGTTCATGTTACCAAAA AAGGTAAATTTTATTAAAATATTTTAAGCATCGTCATTGCTCTTCATTTT TAGTTTAATGTACTTTACGGAATGCTGTTTAAGTCCACGACTGTGGAGAA GTTCTATTGCAAGGGTAAATGGATCATGTTTCCATGGAGATGAGCGGACA AGTTTTTGATCGTAAATGACAAGAACAATATAGTTATTAAACGACACGAG CAGGTCTCATGTTAAAACACATAAATTGAAAATAAAAATATATACCTTAT CGTAATGTTTATAAAATTAGAGTATAAAACTGTGTATAGTAAGTAGGATA AATTTTGAGAATATCTTAAGAACATTATACTTTTTAGTGGAAAAAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00005785TCONS_00005785Clytia hemisphaericatranscript
TCONS_00005784TCONS_00005784Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00005785-proteinTCONS_00005785-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000059supercontigsc0000059:699007..708053 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.02 0.02 0.14 0.14 0.41 0.54 2.66 3.1 1.89 2.27 2.29 0.96 7.94 7.14 5.84 5.34 5.18 5.25 12.63 12.09 7.73 8.42 3.24 3.67 5.73 7.14 0.2 0.27 3.87 3.68