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Sequence
The following sequences are available for this feature:
transcript from alignment at Sc0000047:1215677..1220428- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00061159 ID=BlTCONS00061159|Name=BlTCONS00061159|organism=Branchiostoma lanceolatum|type=transcript|length=4752bp|location=Sequence derived from alignment at Sc0000047:1215677..1220428- (Branchiostoma lanceolatum)
GACGACAAAATGTGTCGCTAATCCAGATTTTTGTACTACTGTATTTAGCT
CTACGTAAGTAGCCGAGGTTGCATTACACCTGGGATTGACGTAAAAGTAG
GTACCAAGTATAGTTTAATCAGTCAAATTGATTTCACAATACCCTTGTCG
TTGCCAGTCAAGAAAATGTGTCTAACTCCAACGCCCCCCCCCCCACGTTG
TGTAACTTTTCTCCTGCGTTGTTCTAGCCGAGTTGTAAAACTGTATCTGT
ATCTGTATCTGTATCTATATAGCCGGTATAACCGCCATCAGGCGTAACAC
ACCAGCTTCGCAGGCACGCGGCGCGGCAGCAGCTGGTCATATTACACCGA
ACGGTCTGTTACACCTAGTCTTTGCATATCTGACTGCAACCGTTCTTTAA
AGCTACTTAGTGATGAAGCTCCTACAGTACTTGATGACAACGAGTTCCAT
TCTACTATGGTTCTCGGGAAATACGAATTTTTGAACACGTCAATCCTTGG
CTGATAACTCTGGTACTTAAAAGCATGACTATTTCTGGTCCTCTTCTGAG
CTGGCATTAGATACTTATCAGTCGGTACGTCCACAAGTTTATTAGTCATC
TTGTACATCATGCAAAGTCTGGACATTGTTCTCCTGTCCTCAAGTGACAT
CCATTGCAGGTCTGCTTTCATTTTTGTTACACTGGCGCCCCTTTCATAGT
TGTTCGTGCAGAATCTGGCAGCTTGGTTCTGCACCCTCTCGAGTTTATCT
ATATCCTTCTTTGTGTATGGATCCCAAACTGTTGCAGCATATTCAAGGTT
TGGTCTTACTAGAGACGTGTATGCAAGTGATTTTACCTTTGCTGGGCATG
CCCACAAATTACGTTTGATCACTCCCAATGTCTGTTTAGCCTTAGTTGTT
ACTTTGTTGATATGGGTGTTCCACTTTAGCCCCGTTGTTAATGTAACGCC
TAGGTACGGGTGGCTCTTTGCTGTTGCTAGAGCCTGTCCACAGAACTGGT
AGGTGGTTACAATTGGGTTTCGTTTGTTTGTTATATGCATGATGTAACAT
TTTTCCGGATTAAACTGCATTAGCCATCTGCTTTGCCATTCTTCGAGTGT
GTTCAAATCTTCTTGCAAAAGCTGTGAATCACTCTGTGTGGACAACTCTA
TATATAACAGGCAGTCATCGGCAAATAACCTAACATTTGAATCAAGCTGG
TCTGGTAAGTCATTTATGTACAGGAGGAAGAGTAACGGTCCCAGAACAGT
TCCCTGTGGTACGCCTGACGCAACTCTAACTGGAGCTGAGGCCTTGCCTT
CTACCACTACCGTCTGTTCCCTATTGGTCAAGAAAGCCTTCAACCAATTT
AGTGTGGTGCCTTGAATTCCGTAGTGCTCTAGTTTAGTGATGAGTCTGCT
ATGTGGGACTTTATCGAAAGCTTTAGTAAAATCAAGAATTGCTAGATCTA
CCTGTTTTTTACTGTTCAGTGCGCCAGCTATGTCATGAGCTGTCAATATA
AGCTGTGTTTCTGTGGATCGCTTTGCTCTGAATCCATGTTGGTAGTCAGT
CAATATGTTGAAACTTTCTAAGTGTTTCATGACATGACTATGGATAATGT
GTTCAAGTAGTTTGCAGGATATACAGGTCAGTGATACAGGTCGGTAGTTG
CCGGGGACAGCTCTATCTCCCTTTTTAAAAATGGCACATATATTTGCATC
CCTCCAGTCTTTGGGAATTTCTCCTGTGTCTAACGAGTGTTGGAAAATAT
TGGTTAACACAGGTGCTATTTCGGTGGCTGTCATTTTGAGGAACCAAGGA
GGTATTTGGTCTGGACCAGATGCTTTAGATGGATTGAGACCTTGGAGCAT
TTTTTCGACACCATTAGGGGAAATCACTATGTGTTCCATGGGAGGGGTAC
AGGGCTGTCCGAGAGTTGGCATGTTTGTTGTGTCTTCCTCTGTGAACACA
CTTTTAAACTGTGAACTGAGTGCCTCTGCTTTTTTCTCGCTATCACTGAC
AATGGAATTACCAATCTTTAGAGGGGCTACGCCGACAAGGTCTCTTCTTA
GGCCTTTTATGTATGACCAGAATGTTTTGGGTTTGTCAATTATGGCTTCC
CCCAGTATGTCTGCCACATATTTTGAATGTGCTGCTCTTATGCTTTTCTG
TACGCCCTTCTTAACTCTCTTGTATTTGTTCATGTCTTCCTCTCGCCCTG
TTCTCTTAGCTTTGTTGTAAAGACGTTGTTTCTTACGACAATGCCTTCTT
AGGTTTCTGTTGAACCAAGGCAGGTTGTATCTGCTTGATGTTGTTTTACT
AGGGATGTGCAAGTTCATCGTGTGCTTTATTTTGTCTTTAAAATCATCCC
ACTTCTGTGTCACGGACATATCCTCGGTTCGTTTGTTAAAGTTCGTTGCA
TAATCACTTAGGTCACTCTTGATGGCCGGTTCATCAGCTTTAGTTCGAAT
GTACACTTTTCTCTTGGGTTTCCTGTTTTGTTTGGGTGCAAGGTTGACAT
CCACCAATACCATGTCGTGGTCACTTATTCCAGGAACTACTGTGGTCTTT
TCGATTATGTTTGGGTTATTAACTAAGACCAGGTCCAAAAGATTACCATT
CCTAGTGGGCTCTTGAACTGTTTGGAATAACCCATGGTTATCCACTAAGT
GCAGTAGCTTCTGTGCCTGTCCTGAATTGCTCTGAGTGTTATCTGTAGTG
CTAGCATCCCAATTTATACCAGGTGTGTTAAAGTCTCCAAGGATGATCAC
GTTGTCAGAGTTAATTTTAGGTCCCATCTTACTTATGGACTTGTCCAGTT
CATCCAGGCTATTGCCCTGGTCCGATGGAGGTCTATAGTATGTACCAATC
ATTAGTGGTTTCTTTCCTGCTAGTTGAGTCTGTGTCCAAATGATCTCACA
GTCTGTGTCTAGATCTGGCCTGTGTGTGACAATCAAATCATNTAACTGGA
TGGTTCTCCGTAAACCCACGTACTTGACCAATTATAGTTTGATCTGTCAA
ATCGGCTTCATTTAATACTAACCTTGACAGTCAAGAAAAGGTGTCCAACT
CCACGGCCCCCCTCCCCCATGCACGTTGTGTAACTTTTCTCCTGTGTTCT
GTTCTAGGCGAGTTGTAAAACTGGATGGTTCTCCGTAAACCCAACCGGCG
GATCAGGGGGCTTCTGGAGCTGTGGCCGGGTAAGCGGCGGCTGGGAGTGT
ACCGCTTCCTGCCGATCTTCTTTGTTATGGGGGCGGGCATGGAGTGGTTC
ATGATCAACGTTCGACTTGGCAGGGAGACCTTCTGTAAGTACCACAAGGT
TATGTATGGTTGATTAGCATGTTATGTAACGTTACATGTAACAATTAGAT
ATTATTGGAGCCGGTGTCAACTTAACAGGGTTACACACGGGTAAATTATG
GGCCTTTGAAATATTTCATGCTTTGTTAGACATAGAAAGTGAGTGTCATG
TCAGTGACCTGGAATTGTGTGAAAGGTTGGTGACAAAAACAAGACTGGCT
AAATCCTGTAAGCATGTCACTAATTGTTAGACATGGCTACTGTCGTAGTA
TGGTCACTTCCTCTTTTAAGAAGCTACAGTACCTGTTACGATTAACATCT
CAATGGACTTTTTTCTAAACATGACACCCCGATATACCTGCTAGATATAC
AAATGTTGAGATTTTTGTCTTGGATATGAATATGATATTTCTTTGTCTCA
TGGACGTAACAGCTCTCAATATCTTATCAAAGGTTTGGATGATGTGATAC
AACTAAGACTTCTTCATTGCAGATGATGTGTACAGAAGAAAGCAGGCAGA
GCGACAGTATGAGGCTGCAGGCACAGACACAAGCAACGATCAGTGAACTT
AAGTTATGATAACATTGCAATCCAAGAAGAAAGCACTTTGCCAAAGTTTA
TTTCATTCAATGCTGACTGGTTGACATTCAGTACAACCTTGTTCTCTGTA
TTAAGACACTCAGCAAAGTGCAGACAGTATCCTTTACAGAAGCAGTTTCA
TATTCGAGAGATTTGAGAACAGCCATGCCTGCAGGAGTGCGGTGGGGGCC
GTACTTGCGCTTCCTGACAGCCAGTATGCTGTCCATGTTTGCTGGTGCGC
AGGTCATGCACAAGCTGTACAACCCTGACCTCTCCATCCCTGAGGTGCCG
CCAAAGCCCGGGGAACTGAAGACAGAAGTCCACCAAGTGTGGAAGAGACC
AAGCACAGACTCAGAGAGCAGCAGTTCAGAGGGCAAGGCTTCATAGTAAA
GTGTTCTGGTGGCTCAGGTGACTTGGGACTGGAAGATGTTTGCAACATTG
AGATTTAGATGGACATTGCTATGATAAGGACTTTTTGGGATGAACTAAGA
ATAGTTAGTATATCAGTTACTGTTCGATTCATCTTGGAATACATGTAACG
TTACCTTAAATTCATTCATGGCTTTTTCTGAGTTAGCTAGTTACCTGTAT
GGATCAGTTGAATAAAGTGGAAAAGAGTTGTGACCTTGCCATGTTGTGAT
TCTGACACAAATTTAAATAGCGGTTTGATAAATTTTGTTGTAATAGTTAG
CACAAAGTATATGTGCACTACTATACCAAAGGAGTGTACAAAAGAAAAGT
ACTGTAAACAGCTACTCAGTTACAGGAAGTACACACAAGACAAGAATTGA
CATGAAAATAAGCTCTTTATTGCCATGCAGAATTATCAACTACATCTGGG
AGTCAGCCTTCACAGCTCAGATATAAGAAATATTAAATATACTCTATAAA
TC
Gene-mRNA-Prot
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00061159-exon-Sc0000047-1564993656:1220375..1220428 | BlTCONS00061159-exon-Sc0000047-1564993656:1220375..1220428 | Branchiostoma lanceolatum | exon |
| BlTCONS00061159-exon-Sc0000047-1564993656:1217145..1217321 | BlTCONS00061159-exon-Sc0000047-1564993656:1217145..1217321 | Branchiostoma lanceolatum | exon |
| BlTCONS00061159-exon-Sc0000047-1564993656:1215677..1216656 | BlTCONS00061159-exon-Sc0000047-1564993656:1215677..1216656 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000047 | genome | Sc0000047:1215677..1220428 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF030239 |
|
