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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL07777_evm0 >transcript:BL07777_evm0-protein ID=transcript:BL07777_evm0-protein|Name=transcript:BL07777_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=250bp
MAESVSSEDYDILDCLEISESDQDMSVSGSISDDEESGGAGSYGLRPRSQ
QARRKIRQIADERCDAVGEPDGKDHGKPRVVRPKAKRVAANVRERRRISE
YNKAFNQLRVSLNHPLSGKRLSKIATLRRAINRIKALRDSLDSAPPAVEE
DSDGPVSESDASSPAASSLSGDDTHVYNNHAISGTEFTVQPSFVPHTMSV
YSTNVNQHYGRTEPQFFREEPFDSFDLCGVPPCRFDTSWPYSGFQSAMAW Run BLAST on NCBI mRNA from alignment at Sc0000359:196715..199612- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL07777_evm0 ID=transcript:BL07777_evm0|Name=transcript:BL07777_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=2898bp|location=Sequence derived from alignment at Sc0000359:196715..199612- (Branchiostoma lanceolatum)
GATACCCTGACCAACAGGTAGCACGTTACATCCGAAGACGACAGGTACAA
ATAGTAAATGTTTCGTACGGGATTCTCGCAGTCCAAAAACCAACTGCGTG
GGACTGTAGAGATTATTTTTGAGTCACGTTTTCCTCTGAAGCGCCTGATT
CACTGCTACAGGACTGATTATTGACATTGCGTGTCTACTGTCAGGAAGGA
AACTGACAAATTTTGCGGTTTAAATCGTACCAAAAAGCGACAAATAGACT
TTTAAAAAGACCTCTGTTGGACAGTGCGGAACTTGGGAGTTGCATTTCAA
CGTAGTAAGGACAAGAGAGGCTCTAAGTGAAGAGTGAAGTTTCAATTTTT
CTAAGAACCATGGCAGAAAGCGTAAGCAGCGAAGACTACGACATCTTGGA
CTGTCTAGAAATTTCCGAGAGCGATCAGGACATGTCGGTGTCTGGGAGCA
TCAGCGACGACGAGGAATCCGGGGGCGCCGGCAGCTACGGTCTTCGGCCC
AGGTCGCAGCAGGCTCGGAGGAAGATCCGACAGATTGCCGATGAGAGGTG
CGACGCCGTCGGCGAGCCTGACGGGAAAGACCACGGGAAGCCAAGAGTCG
TCCGGCCCAAGGCAAAACGTGTGGCGGCGAACGTACGAGAGCGACGCCGT
ATTAGCGAGTACAACAAAGCCTTTAACCAGGTAACATATACTATATAACC
ATTGTCTTATCATTTGAAAGCATTCCCTATAATGATATGATAAATATTAC
AAAGCCTATCTGCCACAAACATAAATCATATTTGTGAGCAGACTCATATC
AGGGACAAATACATAGAGTAGTACTTAGGCGTTAAGTTTTAATTCTTTAT
TGATATGAAGGGAGTGTTCTCTATTTAACCCACAACATAATACACAGAGA
GTTTGAGCAGTTAGTAATATATATTTGATTGTTTGGATTTTAAGTTTACC
TCCATCGTAAAGCATGTACAGCATTCACTTCCATCGTCCATATATACCAA
AGTTTTATCCCATTTAAAAAAAAGACCTAAAAATTACGGTCTAAACAAGA
CTATTGGATGAGTACACCACACAATAAACTTGCATCGATATAAAACTTTG
GATCTGTGGTCAATAGGACCACATTCGCTACTTGAGAATATTCTTGAAGT
TCTGGCAAAACAGATCAGCTATATTTTGTAATGACGCATATTAATTTCAT
ATTCTTTTCCTACCACAACAGCTGCGAGTGAGTTTGAACCACCCTTTGAG
CGGCAAACGTCTGTCCAAGATAGCGACTCTGAGGAGAGCGATCAACCGCA
TCAAGGCCCTTCGGGACTCCCTCGACTCTGCCCCGCCGGCGGTGGAGGAA
GACAGCGATGGGCCCGTGTCGGAATCCGACGCATCCAGCCCCGCGGCGTC
GTCCCTATCAGGCGATGATACCCACGTCTATAACAACCACGCGATTTCTG
GGACAGAGTTCACTGTGCAGCCGTCATTCGTTCCGCACACGATGTCCGTC
TACAGCACAAACGTGAACCAACACTACGGCAGGACTGAGCCGCAGTTTTT
CCGCGAGGAACCGTTCGACAGTTTCGACCTTTGCGGGGTGCCTCCATGTC
GGTTCGACACCTCGTGGCCGTACTCTGGATTCCAGTCGGCAATGGCCTGG
TGAGAACAGACTTTGTCAAGTTTTCTAAACTATGATATTAAAGGATTCTG
CTACCTTTTCGCAGCAAATAAGATGTATAGTTATTGTATGTGAAGATTTT
GTTATGAAAGGATATTACACAAAATGCGTATAGGTTCGACAATGGCGTGG
TGAGAACAGACTTTGTCAAGTTTTCTAAACTAAATCAAATGATTCTGCTA
CCTTTTCGCGGCAAATGTATATATATAAATATTGTGTTATAAAAGGATAA
TTATACACAAAATCTGTGTAGGTTCGACACGTCATGTCCTCACTCTAGCT
TCCATTTATTTTTACAATGGCCTGGTGAGAACAGACTTTGGCGAGTTTTC
TGAACTATAGCATCAAAGGATTTTGCTACCTTTCCCACTATAGTTATTGT
ATATAAAAATTAGGTTATGAAATGATAAATTATACACGAAATACGTGCAG
GTTCGACACCTCATGGCCTTACTATAGCTTCCAGTTTGCATTGGCCTGGT
GATAACAGACTTTGTCAAGTTTTCTCAACTATGATATCAAAGGCTGGCTT
TTCGCCGAACAATATTGTACATAAAGATTATATTATTATGGATTAAACTA
TGCACTGAATACGAAGACTTTTGCGCTTAAGTTCTTTTCAGGTACATTAC
GTTTCCATGTCATTCTATGTCACTTTATTGTTGGTATATGTCTTTATTGT
TTAATTTCCCGTATTGCTGATACCTTTACAAGTATCTGTATTTGTATAGC
CCGAATAACAACCCTTATGCGTAACACACCAGCTACAAATAATACTCCAC
ATATATAAATGATACTCTCTGAATTTCACATTTCTTAGGTTTAGTTTGAT
AGTTCTTTATTCAATCATATACGTTTGCTGACATGTCGATAGATAGGATC
TATCTGACATGTCGATAGATAGGAAGTCCACGTTATGCTTAATGTACTCA
TAATAGATAACATCTAGAAAGGGCTGGGCCTCACTCCTATTTGATGACAT
TGTGGTAAGGGGCCGGTGGTTATTGATAGCAAGGCGTATCCGAAGTGTCG
TGCCCATTGGATTATCCATACCTTACCTCATAAACTATTTATACCAAGTG
GTTCGATTAACAATGACGTCACTTATTCGGCTTCATCGTATATAGTTCAA
TAGTCTACAAGGTCACACAGCAAGGGGACAAAAATTAACTAACTTAGCCT
TTGTCTTTCCAAGACCTACTCACATAGCAAATATCATCCAAATACCCC Coding sequence (CDS) from alignment at Sc0000359:196715..199612- >transcript:BL07777_evm0 ID=transcript:BL07777_evm0|Name=transcript:BL07777_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=1506bp|location=Sequence derived from alignment at Sc0000359:196715..199612- (Branchiostoma lanceolatum)
ATGGCAGAAAGCGTAAGCAGCGAAGACTACGACATCTTGGACTGTCTAGA
AATTTCCGAGAGCGATCAGGACATGTCGGTGTCTGGGAGCATCAGCGACG
ACGAGGAATCCGGGGGCGCCGGCAGCTACGGTCTTCGGCCCAGGTCGCAG
CAGGCTCGGAGGAAGATCCGACAGATTGCCGATGAGAGGTGCGACGCCGT
CGGCGAGCCTGACGGGAAAGACCACGGGAAGCCAAGAGTCGTCCGGCCCA
AGGCAAAACGTGTGGCGGCGAACGTACGAGAGCGACGCCGTATTAGCGAG
TACAACAAAGCCTTTAACCAGCTGCGAGTGAGTTTGAACCACCCTTTGAG
CGGCAAACGTCTGTCCAAGATAGCGACTCTGAGGAGAGCGATCAACCGCA
TCAAGGCCCTTCGGGACTCCCTCGACTCTGCCCCGCCGGCGGTGGAGGAA
GACAGCGATGGGCCCGTGTCGGAATCCGACGCATCCAGCCCCGCGGCGTC
GTCCCTATCAGGCGATGATACCCACGTCTATAACAACCACGCGATTTCTG
GGACAGAGTTCACTGTGCAGCCGTCATTCGTTCCGCACACGATGTCCGTC
TACAGCACAAACGTGAACCAACACTACGGCAGGACTGAGCCGCAGTTTTT
CCGCGAGGAACCGTTCGACAGTTTCGACCTTTGCGGGGTGCCTCCATGTC
GGTTCGACACCTCGTGGCCGTACTCTGGATTCCAGTCGGCAATGGCCTGG
TGAATGGCAGAAAGCGTAAGCAGCGAAGACTACGACATCTTGGACTGTCT
AGAAATTTCCGAGAGCGATCAGGACATGTCGGTGTCTGGGAGCATCAGCG
ACGACGAGGAATCCGGGGGCGCCGGCAGCTACGGTCTTCGGCCCAGGTCG
CAGCAGGCTCGGAGGAAGATCCGACAGATTGCCGATGAGAGGTGCGACGC
CGTCGGCGAGCCTGACGGGAAAGACCACGGGAAGCCAAGAGTCGTCCGGC
CCAAGGCAAAACGTGTGGCGGCGAACGTACGAGAGCGACGCCGTATTAGC
GAGTACAACAAAGCCTTTAACCAGCTGCGAGTGAGTTTGAACCACCCTTT
GAGCGGCAAACGTCTGTCCAAGATAGCGACTCTGAGGAGAGCGATCAACC
GCATCAAGGCCCTTCGGGACTCCCTCGACTCTGCCCCGCCGGCGGTGGAG
GAAGACAGCGATGGGCCCGTGTCGGAATCCGACGCATCCAGCCCCGCGGC
GTCGTCCCTATCAGGCGATGATACCCACGTCTATAACAACCACGCGATTT
CTGGGACAGAGTTCACTGTGCAGCCGTCATTCGTTCCGCACACGATGTCC
GTCTACAGCACAAACGTGAACCAACACTACGGCAGGACTGAGCCGCAGTT
TTTCCGCGAGGAACCGTTCGACAGTTTCGACCTTTGCGGGGTGCCTCCAT
GTCGGTTCGACACCTCGTGGCCGTACTCTGGATTCCAGTCGGCAATGGCC
TGGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000359 | genome | Sc0000359:196715..199612 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL07777_evm0 |
| Biotype | protein_coding |
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