transcript:BL96710_cuf1 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL96710_cuf1
Unique Nametranscript:BL96710_cuf1
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL96710_cuf1

>transcript:BL96710_cuf1-protein ID=transcript:BL96710_cuf1-protein|Name=transcript:BL96710_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=283bp
LFSAHELEEFEKSYSRDPYPDVSDKEQLATKLNISLRRVKVWFQNRRRKG
RPGRPRLKRKAESSESEDEEDKRGGKDKRERFSLDQVEEMEKVFQQFPYP
EVEVRAELATRFNVNPKRVQVWFQHRRNKWKKGEKPRMKTTRRRKPSPKP
STVPCPKTSPPDFKGKWTLFSEDQLKELEAAFQKDRFLPKPEREKLAERF
SVDQRKVEIWINNRRAKWRRSGKRKLKGTGRRGRGPNPPNAPSNTATGSS
AADKAPLNRKRKNVGEKDGASSRGKKLTRELRN
Run BLAST on NCBI

mRNA from alignment at Sc0000016:2747618..2758846+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL96710_cuf1 ID=transcript:BL96710_cuf1|Name=transcript:BL96710_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=11229bp|location=Sequence derived from alignment at Sc0000016:2747618..2758846+ (Branchiostoma lanceolatum)
GTTGTTTTCTGCTCATGAACTTGAGGAGTTCGAGAAGTCATACAGCCGTG ACCCGTATCCAGACGTCTCTGATAAGGAGCAGCTGGCCACCAAGCTCAAT ATCAGCCTAAGGAGGGTCAAGGTTAGAAAGTTTTGATAATGTTTCAAATG TTAGTAATACATAATTTATAGAATACAACACGGGGTATTCCGTATCACCC GAGGTACCAGCCCGACCGCGGGTAGGATCAGGCGGAATGTTGTATTTTAT TTATGTCAAACCTTGGCCATACCCACCCAGGAAAACACATTTCAATGTAT AATGCGCCAGAAGTTGAGGGAGTTTTGTGTCCTCGAACAACACAACTGTA ACAACATAGATTCTAATCTCCGAATCCGGTATTCGAATTTCCGATGGCGG CGCAACCGGCACGCTCGAAATGCATTTGTAATATTCTATGCCCGGCCTGA TCGCGTGTGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNGGTACCGGGTTGCAACCTCAGAATCCGGTATTCAAATTTTCGACAG CAGTGCCATTGGTGCATTCTAAATGCATTCTAAATATTCTATGGAAGCCT GTGTGATAAAAGTAGAACCCTGTGTGATAACCAAAGTTATCGCCCGGCCA AGAACACCCGTATCAGACGTTTTTGCGGCCCAGGTATGACAAAATTCCTT ATATTTTCTTCTATCAATAGTAGAATCTTCATATAGACTGAACTTGCCAG TATTATGACTTTTACAACGCTTTGTACATGTATCTGTTACATTTGTTGTG CAGTTAACTTCTACTGGACCTGACTTGTATTTTCACAGGTGTGGTTCCAG AATAGGAGAAGGAAGGGAAGACCAGGAAGGCCCAGGCTGAAAAGTGAGTT ATGACTGTGTATGATTTTTTGTAGTCTTACATTTCCAACAAAGGTTTTAC TACGCAAACCTGTAAATACTGTTGCATTTAAGTTTGCAGGGATTTAACTT AGTGGAAGGGAGAAAATGGATTGTTTACAGTGATTTTAGGTTTGCAGTTG AAACAAACGGGTAGGTAGGCAGGCAGGCAGAAGACACAACAAGCATTTTT AAGTTTGGGGTGAAAAGGTCACTACGAAAACCATGAACACTGCCGAAATT TCTGCATTTAGAGTTGTTAAAGAAATTTATCTTTTTTTTTTTTTTTTTGC ACTCAAAGGGAAGGCGGAGAGCTCTGAGTCTGAGGATGAAGAAGATAAGA GAGGAGGAAAGGATAAAAGGGAGAGGTACACATGATTTTCTTTTGTTTGT TTGTTTGTATTTGCCCTCAAATGCAATGGCCTAGTCAGTAGAGTGTTTGC GTTTTACATGGTACATGTAGGTTGTGAATCATACTGCTTTCTCTGCTTAG CACTCAGCATTTGGGACAGAGTATGACAGTTAACCTTCTCCCTGCTGCCT AACTCTGTAACCATTTGGGAATTGGGTGCCAAATGGCTACTTCTGTGTGC TAAAGGTTAAAGACACTCCACTGCCAGTGGAGCAGCCCCCTGCACAATTT GTGTGGCCCAAGGACTACTGAAATGGAGATGGGTGCCGCCCTATTAGTGT GCTATGGCCAGACATAAATATTGGCTGCCAGGTGGTTTGGCACCCTTGCT ATATTCCATTATATAGATGATTCGATAAAACATTAAGTAGTATACATTAT GAAAAGGCACTTAACATTCCATTTCAACTGCACATTTCAATTTCTTTACT AAATTGTACTTTTCATTTCTATGTTTTTCTATGAAGGTTTTCCCTTGACC AAGTGGAAGAGATGGAAAAAGTGTTCCAGCAGTTTCCCTACCCAGAGGTC GAAGTTCGAGCAGAGCTGGCCACGAGATTCAACGTCAACCCAAAGAGGGT TCAGGTAAGTTGATAAGTTACGACTAACTAGTTCATGAGTTACTATTAAC TAACCTTATCGATATCCTTGCCTACGAGACTTACTGCTTATATTACAACC CTATTGAATCACAAGACCGGAGACCGGTTCCATGGGCTAGTGGGTAGAGT GTTCGCCTTGCACACGGTAGGTCGTGAGTTCGATCCCTGGCTGGGTCATA CCAAAGACTCTTAAAATGGTACATACTGCATTTGAGAGAAACATATGTAT GGAAGTTAAACACACATCACTACCAGCGGACTACCGGGGTAGCCCCCTGC TGTAGTGACTTGCACAAATGTGTGGCCCAAGGGCTACAAAAATAGAGATG GGCGCCACCCCTATGCATCTTATCCAGACGTCTGGGATACTTGAATCATA AGACCACATTGCTTAGGTTGTCTTGTGGTTAGGGTTGTTGACTCAGAAGC TGAAGGTTCTGGGTTTGAATCCCTGGCATGCCCCAGTGTTGTGCCCTCGG GAAAAGCATTTTACACCCATTTCATCACTTGGCGTAGGTGAAAACAAGTA CTCAGCTCAGGCTATTTAATTTGTATATACGTTTATTACGATGCCCTTTA TTTGTATCACGTCAGGGTTCATCATACATATAAACATACAGACATACAGA TTGCAAGTCTGATTAAAAGGAACGTATTATATACATGTAACTGCATAATC ATACCTTAAGATGTACAGACTGTTAACAAGCAACTGAATATGATTTGGCA TGAAAACCCAAAAGGAAAGCTTTGCTAACCCATTTTTTTCTGGAACTTTT TCCAGGTGTGGTTTCAGCACAGGAGAAACAAGTGGAAGAAGGGGGAGAAG CCCAGGATGAAAAGTGAGTTACACTCTGTCAGCTCGTATCTAGAACATAA AATACATAAAGTTCATTGCAAGTTCCTGCCCATAGGCTAATTGCAAGTAC ATGTACATGTAACACGGAGTGGACGGACAGACAATGATGGACAGTATAAC GTGACTACTCTATTAACAACTGACGCTAAGTTCTTTTTGCGAGACCAATG ATGTTTAGAGGAGAGTAGTTTTCTTTTTGTCTGCAAATGTGGAGAAATTA GGATGGAAAATGCACATACATGCAGGCTTTTAGCTAGGATTTATAAACAA GGGGTCCAAAAATGGGGGGGGGGGGAATGATGTGATGCGGGGTTAGGTGT GTTCTAGTCTTATCAAACTTTAGCAGACCATTCCAAGCACTAAAAACTGC TTGTTCCCTCTCTGTCTCCCAATGGGCTCTATGGATTAACAATTTCATGG TAGCTTTGCATGTCAATCAGTTTTCATGCAGTCCCAGTGTCTGGTAGGAC TAAAAACCAAACTGTAATTACCAGGGAAACAGGGGTCCTCTGTGTGTCCA GCTGAAAAAGAGGGCGTCCAATTTCCTAGCTATTTTAGTATCATGCGTCC AATTGACGCATGGACGCATGCCTAGCTAAAAGCCTGCATACATGTAACCA GTTATCGAAACCTATTATTATAGCTCCTGAGTCTCTTTCGTCCTCTATAG TCAGTTGCATCAGAGCCATTGCACACAATCTCTCTTCAATACAACTACAC GAACCAGGGCTCGAAATTGATTTTTGGGAATAGGTGCACTGGTGCACCCA ACCAAAAGATTTAGGTGCATGGAAAGAATTTTGGGTGCACAACTTAAAAT AAAGTAGAATGTCGAAATTACAAAGTTTAACCCTACAGCCATTCTATCTG TAATTCTATACTCTCATCTCCCAAATAAACATACCCCCCGGAATAAACAT ACCCCCTGGACAAATTGTCAAAATCTAATAAACATACCCCCTGGAATAAA CGTACCCCCCGGAAAATTACCAAATTGACACGTTAACTGTGTCCATGCTA CTTCTGTCTTAGGGAAAGAAGATGATAAGCAGGTAGGTTCTTTTTATTTA CATATTCTATATAAGTATGTAAATAACGAACCGAATAACTGTAGATATCT TGTTCAAATTATAATCATTTTCTCCACTTTTGGAAAAATTGGGCATAGAT TCCCCGCGGGGGCCAACGGTGCTTCAAATTCAACAAGTGAAAATGTACAT GATACATGTATTTTCTACTTGGAACTTGAACCAAGTGAAAATTGTTGTAT AAACTGGCATATCATTAAAACGGAAGTAGTTGCCAAACTTCTCAGTTCAC TTGCATGGGCAACACCTTGTACAAATGTATCAACATTTAGAACTTGAACA AAAAATTACCATATCCTGAATATCCAATGAAAATACAAGTATTACGTATT TGTAAAAGCCATGTAGAAAAGGTTGAACTATGCCATGTATGATGTTACTA GTACTTTTTTCTTGCTCAACTTTCCATTTATCATGTATGCAAATTGCATA TAGAAACATGGATTAATTTTGTAAACATTACTAGAAGTATATGCTTTCCA CAAAATCACATTATTATAAAGAACATTATCATATATTCTCCTTTATTGTG TTGTTGCAATCCAAATAATTTCAAATCCAAAAATTACCCTTGATGCATGC AGAAAAAATCTTTCATTTTGAGAAACTTAGTTGTCAACAAACTCATTGTT TAGATGTGAGAAATCTCAGGCTTGTTCTATTTTGTGCTCTCTCTTTCTGA TTAAAAGTTCCTCGGTTACATCTAAAACATTGCCACAAACCACAGGGTTC TCATGTTACACATCAAAGCGCGAGTCAGACGAAGCGGCACCGAACACAGG AACACAGACAGTAAGGGGCGGGGCTAACAGAGAGCTACATGAAGTTCTGA GAATACTCAGCCAATTTGTTTTGAAGGGGAGTGATTTTTGTCAAAACATC GTAGGTGATAATTACTGAAAATAGATTGCAACTTAGTGTTGTTTATCAAC TATTAGGAGGGAATTCACTTTGTTGAAATATCACACATTCTGACAAAGAC AAAAGAGTTTTATTGGAAGATCAAAAAGAGCTGTTTCCCCTTGGTAGAAG TGAGCTCTTCCGTCCGTGGGAAACCTCTAGTGGCGTGCGTTACTGTACTG TGGCGATTTTCCAAGGGCTGAATTTTCATGTTTGTGGTAGGAACCGTAGG ATTTAAATGTTTTTGTAGATATTAAAAGTATTATTCAGTTTTTAATGCTA AGACACTGTTATAATGTGGTGTTATTTTCATATTCTACAAGTTTTGAGGA AAGGCTGTATTTCACGTGAGTAGAATTTACATGCGACTCAATGGTAACTT GAGCATTCATGGTGTTGATTACGTTGTTCTTTTGGCAATGTTTTTGTCTT TTTCGAGTGCAAATTTTGCGATCCCTGTAAGAATTAAGATGGTCTAGAAC GAAAAAAGACTGTCAATGTTGTTTATATGAAAAATAGATTTCAAAACTTA AGTGTGGCGTCTTATTTTGTCTGAGATAACAACATTTACTTTGTAGCGAG ATCGACTGACATGTTAGTACCGCCAGGATTTCAAAAATGCCNGGATTTTA AAAATGCCGGGTCATAGCAGCAGGGAAATCAACGCCGCTGGGCCGAAAAA TAGCAAATTATGAGCAAAAATGTCGGGGAAATATGGGCAGGAAAACCCAA CCTTTCGATTTTGATGGGATCCCTGGTTAGCAAAACTCTGATTTTCAAAA AATTAATAAACGTACTGTCCAAAATAAGAACGTACTGGGTGGATTTTGAG GCTGAAAAAAATAAACGTACCGGTACGTTTATTTGGGAGATGAGAGTAGC TAACTTCAAAATTTCAAACAAACCTGTATATTATAGCATACAAAAATATC TAGGTGTACCAGTGAACCCACAGTCAAAAATTAGATACACAGCCCCAATT TTGGGTGCACAATAATGGTGCACATACAAACTTTACATACATGAACATGA CCTAAAACACATATTTTATGTTCCGGTGACATGCTCACTCTCTTGCCTTT TTTTTCTCAGGGTCTTATTTGAAGTTATTTCCACAAATGCTGGCGTATTT TAATGTCCATCTTGTCAATCCTTACCATTTTCACCAATCCTGCAGGTGTT ATTCTGTTCAATTTCAAACTCAAGTTAAGAAATGCTGACAAATATAAATT TTTCTAGATAATTGAGATGCATACAACAAGAGCTGGACTTTATAGACTGA TAGAACCTTTGTTTCTCTACTTAATCCACCTAATCAATACTGACAAATTT ATATTTCTAATAAGTTCAGACAAACCTGTGATTATGAACCATATCTGCTC TTACATTTTTACCATAATTACAAAGAAGCGAGAAGTCAAATTCATGTAGT TCATAATTCTTGTAGTAATTTGACAGTCTATAGTAGAGATTAGATGTATC TGTATTCTATTCTTTTGTTGTGACCTGTACTTTACCCAGTGGATACTAGT AGGGATGCGTACCTAAACCCACATTCAGGTTCAGGTCCAGATTTAAAAGT GTTTAGATACACATCCCTACCAGTGGGTATATGTGTACAATAAAGGTCTT CATTCATTCATTCATTCATCCATTCATTCATTCATTCATTAATTCACTCA CTCACTCACTCAATCAATCACTCACTCACTCACTCACTCAATCACTCACT CACTCACTCACTCACTCACTCACTCACTCACTCACTCACTCACTCACTCA CTCACTCACTCACTCATTCATTCTTACCGGATATTGTGAATGTTGCAGCC ACCAGAAGAAGGAAACCGTCTCCCAAACCTTCCACCGTCCCCTGTCCGAA GACGTCCCCGCCAGATTTCAAAGGGAAGTGGTGAGTTAAGGTTTCGAGCC TCAGACAGTGGACGAAGCACAACGCTTTTTTTGTTAGCTAGTAGTACAAT ATTAGTGCTGCGTACCTAAACACCTGACCTGAACTGGACTTGTAAAAATG TTAAGGTTCAAGTATAAAAAAACCTAAACATCGTTCAATTAAAAAGAAAA CTAAACATCGGCAACCAAGTCTGGACTATCTCTTTCTTATATTCTCCTTT TTGTTCGATCTAAAACCTCCCTCAGTGAAATTTTCAATAAAAAGACGTAA ATATTGCTAGTCTCACACCCTGTTTCTTCATGCACCTGCCTAGCGTGTCC ATGCTGGTGAGCCCGCAGTGCTGTCTTCTTCTTCTTCTTTTTCATCCTGT CAGACAATCTGTTAAAGGAAACCCAAGCCATATTAGATTTTGAAAGTCAA TTTATTTAGTCATTTCTATACATGATTAGTTCAAACAACACTATCACAAT GTATTGTGAGAAATCACTGAAAATCGTCGCCAAGGTTTTTGTAGGCTCAT GAAACTAAGGGAATCTTCGTACAGCATGTTTTTGCGGGGTTTTAAAAATA GTGTTAGCAAATTTCACTACAATAAAGATTTCAGCATTTTTTTATTTCCA TATTTCGGCCCCTAATATTGCTTTGGTTACATTTAATTGCAGTACTGTAA AGGCACTGTAAACCATTCTCTTGTCTCTTGATGTTTTAGGACACTGTTTT CAGAGGACCAGTTGAAAGAATTAGAGGCAGCTTTCCAAAAGGACCGCTTC CTTCCCAAACCGGAGAGAGAGAAGCTCGCCGAACGTTTCAGCGTGGACCA GAGGAAGGTTGAGGTTAGTTGAGAAGTCATGCTACTTTTGACTCTTTAGT TTGACAAGTTAGGTCATGTTGATTGGATTACTGTAAATGTGGATTTGGTC TCGCTTTTGGAATGAAGTGCAAAGAAAACCTATTCACTAGTAGGCAGATA TAGGAGTTGTACAATAAGATAGTGCCGTTTGTTATAACCCAACATTTCTG TGTAATTCGACAGATCTGGATCAATAACAGGCGGGCGAAGTGGCGGAGAT CCGGAAAAAGGAAACTGAAAGGTGAGTCAGACATGGACGTCTTGACTTTG CTTCTCTAGGATTATGAATACTGTAAATTCATTTGATTTTGCATTGGTTT ATTTCGTGGTAGGAGGGAAAAGGAGAGTCCTCGCAAGGTTTTAAATTTGC GGTTTAGAATTCTGTAGTGCAGTAACAATACATAAGAAACGCACATTCGT AGTGACACAGGATTGGGGTGCATGTGTTGAGCCTGGAGTCTTCTTTTATT ACGAGTTTGCGTAGCAAAACCTTTGTTGGATCCGTTGGCATGTGTGGTGG CTGCCATCTTGAATTGTGACATCACATTTTTGGGGTCGCTTAAGCGTTCT CTAAATTTTTAACAAATCGGCACACAACTATCACACATTCAACTCAAATA AAAAGAAAAATTCAATACCAATTCATATTCATAAAAAGACCCAGTAATCG CTTAACTAACATAGCAAACCTGAAGGATATGTAGCACAAATGCTTAACTC TAGTTCAGTAGGGGAAAGCTGAAAAACTTGTATAAAGGTAGCACACCCTG TGACGTTACACAGTTAGTCCCGCTCCACTGAATGATAGGTTGGTGTCTCT CGATCATTGTTAGGCATGATGTTCTATGGTCTAGGTCTTGTGTAAAATTC TTCACAAATTCTTCACAAATTCTCGCCAGACTAGACTTTGTAGGGAATTC ATACAGATTCTAGTCCTCTGTCTTGCTTCAAGAAGTGTTGTTAACCTTTG CCATCTGACCTTTGCCCTGCTGTAGGTACCGGCAGGAGGGGTCGCGGCCC CAATCCTCCCAACGCACCGAGCAACACGGCGACTGGAAGTTCTGCTGCTG ACAAGGCCCCCCTGAACAGGAAACGCAAGGTGTTTGTATGTTCTCACCAG AATTTTTTCACAGCATAGGGGTCAGGTACAGAAGGCCAACTTTACGCGCG GTGCAAGTCACGCGTGGAGTGCTGAAGACATGACCAGAGTAGGGAGTCTG GCATGTTCCCCCGGAAAATTTGTAAATTCATAACCCAATGAGACATTATT TCATGCATTTTGAGGGATAAATTTTGTGAAGTAGAGTTTTTCCTCTGTCA CAGCCTCATTCTAAAGCCAAATATGAACTTTTCATAAGATTTATGAAGGG TCACAAGGTTTGTCCCAGAAAGAAACGCCCCTATGCAGGTTGAAACAGCA TAGGGGTCCAGACCACAGCATAGGGGGTCCAAATCACAGCATAGGGGGCC CCTAGGCTGAAAAGGCCTGGCGAGAACACTGTGTTTGTATAGGCTTTGAA GCATCACACACCAGCTTCTGTATCTTTATCTGTATAGCCATCATAACTGC CCTTCGGCATAACTGTATCTGAATAGCCAATATATATTCGCTTAAATTCA GTGCGACACACCAGTTTCTTTATCCATATCTATAGAGCTGGTATAACCGC CCTTCTGTGTAACACACCAGCTTCTGTGTCTGTATAGCCGGTATAACCTC CCTTCGGAATAACACACCAGCTTCGGTGTCTGTATAGCCGGCATAACCGC CCTTTGGCGTAACACACTATCTCCGGTATCTGTATAGCTTTATAACCACC CTTCGGCATAACACACCATCTTCCGTATCTGTATAGCCAGTATTACCACC CTTCTGTGTAACACACCAGTTTTGCAGGCACATGGCACGACAGTAGCTGG TTATATTACACCGACAACCTGTCACACCTAACCTTTGCACATCTAACTGG ACTGTTGACATCATAACAAGGAAAAATGAGGGGAAATGACGACCACTTTT AACCGGTCAATGTTTAAGTAACTCTTCAGCTACCTTCCTCGGGCCTTAAT GGACTCTGCTACACCCTGAAGTAGTAGTAGTAGTACAAGCCAAAAAAAGT TACTCAAGCAACTGGATAAAATTTTGAAACTTTTCCAAATTTTATCCAGT TGCTTGAGTAACGATTTTTGGCTTATCTTACTACCTGGATGTCCAACCTT CATCAACATATTAGTAGTACACCTTGCTGTATGAGTTAGTTGTAGCCCCT CTCATCATCATCATCATGGGTTGACCCCTGTGAGGTTATCAAAGTTGTCA TCTCTGTCAAGCGATTTACCTAGACCTTTAGTCTAAAAAATGTTTTAGTT TGTTAAGGTACATGAACAGGTGCAGTAGATGTTCAGGTCCGGACCTGTAC CTGAACAATTTTACAGGACTGGTACAGGTACAGGTTTTAGGTACACAGCT CTACCAGTATCCCTGGAGAAAATCCTTGCGAAGGTCAGCTTCCTGGACTC AGTGTGTTTTTCCACGGGGCCTCCATAGCCCCTCTATGTACATGTAACAT ACTAGCCTCAGGATCCTATAGCCTCCATAGCAGGCTCTGAACCGGCCTTT TTGGGGGCTAAATAATACACCTTTTGCAGCCAGCCCGTAACCATCAGCCA CCCCCGTAACCATTTTGCCGGTAGAGCCTGCATTATAACGGCGGGTCAAA GCGAAATTAAAATCACGTTAGGGGAATTAACGCAGAGGTGCGAATATCCT GCCTGCAGTACACGCACCTCCTCCAGACAGTGCGCTTTCACGCCCCCGTG TGCACTAACCCGACAATTTTCTAACGGTACAAATTCTCAAAATTCTCTTT TTTTGGAGATAAAGAAGTTTAAAATTACTTGTTCGACATTATTTCGGCAT GTCTGACACCCTTGCCAGGACGGAGGGTGGATCGCGCGACGCATGGCGGT TTCCCAATCGGAAAGACACTCTCGGGCCATCCGAGCCGTGACACAAGGCA ACGATAGCTTCTCAGCCTAGCTACAGGCCATGGCAAATCAATTTTGCATC CATTGCCGATGAGCGAATATGATGTGGTCGCCATTTCACCCACCCAGACC CTTGTTGTAGACCAGATAAGACGTGGCTAAGTTTGTTTCCATCTTATTTC GCTATGGTAGATGCCCCCCTCCCTCACTGTCATCATGCAATCCGAGGCAC ATAAAAACTTGCGTTTGTCTAGCGTTTGCCTTAGCCCATGTTCATGTTTG TCTTTAGGAACAGTTGAAGTTGAAATAGCAAACTTTTTTGCCACAAACTT TACGATGCATGCAAAAACGAGTTACCAGATGTACCAGTCGGCGCGTGTTG GTAAACAACATGCTGTATGTAAATGAGCAGTCGCGCGTGCGGGCCGAGTT GTTAACGTGTTAACTGCTCTTCGCGGACATGCGAATTGCTCCTAACGTGA TCTTAATTTCGCTTTGACCCGCCGTTATAATGCAGGCTCTACCGGCAAAA TGGTTACGGGGGTGGCTGATGGTTACGGGCTGGCTGCAAAAGGTGTATTA TTTAGCCCCCAAAAAGGCCGGTTCAGAGCCTGCTATGGAGGCTAAGGATC CTATATGTTTTTGCAGAACGTTGGAGAAAAAGATGGAGCGTCCTCCAGGG GAAAGAAACTCACCAGAGAACTGCGCAAC

Coding sequence (CDS) from alignment at Sc0000016:2747618..2758846+

>transcript:BL96710_cuf1 ID=transcript:BL96710_cuf1|Name=transcript:BL96710_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=8490bp|location=Sequence derived from alignment at Sc0000016:2747618..2758846+ (Branchiostoma lanceolatum)
TTGTTTTCTGCTCATGAACTTGAGGAGTTCGAGAAGTCATACAGCCGTGA
CCCGTATCCAGACGTCTCTGATAAGGAGCAGCTGGCCACCAAGCTCAATA
TCAGCCTAAGGAGGGTCAAGGTGTGGTTCCAGAATAGGAGAAGGAAGGGA
AGACCAGGAAGGCCCAGGCTGAAAAGGAAGGCGGAGAGCTCTGAGTCTGA
GGATGAAGAAGATAAGAGAGGAGGAAAGGATAAAAGGGAGAGGTTTTCCC
TTGACCAAGTGGAAGAGATGGAAAAAGTGTTCCAGCAGTTTCCCTACCCA
GAGGTCGAAGTTCGAGCAGAGCTGGCCACGAGATTCAACGTCAACCCAAA
GAGGGTTCAGGTGTGGTTTCAGCACAGGAGAAACAAGTGGAAGAAGGGGG
AGAAGCCCAGGATGAAAACCACCAGAAGAAGGAAACCGTCTCCCAAACCT
TCCACCGTCCCCTGTCCGAAGACGTCCCCGCCAGATTTCAAAGGGAAGTG
GACACTGTTTTCAGAGGACCAGTTGAAAGAATTAGAGGCAGCTTTCCAAA
AGGACCGCTTCCTTCCCAAACCGGAGAGAGAGAAGCTCGCCGAACGTTTC
AGCGTGGACCAGAGGAAGGTTGAGATCTGGATCAATAACAGGCGGGCGAA
GTGGCGGAGATCCGGAAAAAGGAAACTGAAAGGTACCGGCAGGAGGGGTC
GCGGCCCCAATCCTCCCAACGCACCGAGCAACACGGCGACTGGAAGTTCT
GCTGCTGACAAGGCCCCCCTGAACAGGAAACGCAAGAACGTTGGAGAAAA
AGATGGAGCGTCCTCCAGGGGAAAGAAACTCACCAGAGAACTGCGCAACT
TGTTTTCTGCTCATGAACTTGAGGAGTTCGAGAAGTCATACAGCCGTGAC
CCGTATCCAGACGTCTCTGATAAGGAGCAGCTGGCCACCAAGCTCAATAT
CAGCCTAAGGAGGGTCAAGGTGTGGTTCCAGAATAGGAGAAGGAAGGGAA
GACCAGGAAGGCCCAGGCTGAAAAGGAAGGCGGAGAGCTCTGAGTCTGAG
GATGAAGAAGATAAGAGAGGAGGAAAGGATAAAAGGGAGAGGTTTTCCCT
TGACCAAGTGGAAGAGATGGAAAAAGTGTTCCAGCAGTTTCCCTACCCAG
AGGTCGAAGTTCGAGCAGAGCTGGCCACGAGATTCAACGTCAACCCAAAG
AGGGTTCAGGTGTGGTTTCAGCACAGGAGAAACAAGTGGAAGAAGGGGGA
GAAGCCCAGGATGAAAACCACCAGAAGAAGGAAACCGTCTCCCAAACCTT
CCACCGTCCCCTGTCCGAAGACGTCCCCGCCAGATTTCAAAGGGAAGTGG
ACACTGTTTTCAGAGGACCAGTTGAAAGAATTAGAGGCAGCTTTCCAAAA
GGACCGCTTCCTTCCCAAACCGGAGAGAGAGAAGCTCGCCGAACGTTTCA
GCGTGGACCAGAGGAAGGTTGAGATCTGGATCAATAACAGGCGGGCGAAG
TGGCGGAGATCCGGAAAAAGGAAACTGAAAGGTACCGGCAGGAGGGGTCG
CGGCCCCAATCCTCCCAACGCACCGAGCAACACGGCGACTGGAAGTTCTG
CTGCTGACAAGGCCCCCCTGAACAGGAAACGCAAGAACGTTGGAGAAAAA
GATGGAGCGTCCTCCAGGGGAAAGAAACTCACCAGAGAACTGCGCAACTT
GTTTTCTGCTCATGAACTTGAGGAGTTCGAGAAGTCATACAGCCGTGACC
CGTATCCAGACGTCTCTGATAAGGAGCAGCTGGCCACCAAGCTCAATATC
AGCCTAAGGAGGGTCAAGGTGTGGTTCCAGAATAGGAGAAGGAAGGGAAG
ACCAGGAAGGCCCAGGCTGAAAAGGAAGGCGGAGAGCTCTGAGTCTGAGG
ATGAAGAAGATAAGAGAGGAGGAAAGGATAAAAGGGAGAGGTTTTCCCTT
GACCAAGTGGAAGAGATGGAAAAAGTGTTCCAGCAGTTTCCCTACCCAGA
GGTCGAAGTTCGAGCAGAGCTGGCCACGAGATTCAACGTCAACCCAAAGA
GGGTTCAGGTGTGGTTTCAGCACAGGAGAAACAAGTGGAAGAAGGGGGAG
AAGCCCAGGATGAAAACCACCAGAAGAAGGAAACCGTCTCCCAAACCTTC
CACCGTCCCCTGTCCGAAGACGTCCCCGCCAGATTTCAAAGGGAAGTGGA
CACTGTTTTCAGAGGACCAGTTGAAAGAATTAGAGGCAGCTTTCCAAAAG
GACCGCTTCCTTCCCAAACCGGAGAGAGAGAAGCTCGCCGAACGTTTCAG
CGTGGACCAGAGGAAGGTTGAGATCTGGATCAATAACAGGCGGGCGAAGT
GGCGGAGATCCGGAAAAAGGAAACTGAAAGGTACCGGCAGGAGGGGTCGC
GGCCCCAATCCTCCCAACGCACCGAGCAACACGGCGACTGGAAGTTCTGC
TGCTGACAAGGCCCCCCTGAACAGGAAACGCAAGAACGTTGGAGAAAAAG
ATGGAGCGTCCTCCAGGGGAAAGAAACTCACCAGAGAACTGCGCAACTTG
TTTTCTGCTCATGAACTTGAGGAGTTCGAGAAGTCATACAGCCGTGACCC
GTATCCAGACGTCTCTGATAAGGAGCAGCTGGCCACCAAGCTCAATATCA
GCCTAAGGAGGGTCAAGGTGTGGTTCCAGAATAGGAGAAGGAAGGGAAGA
CCAGGAAGGCCCAGGCTGAAAAGGAAGGCGGAGAGCTCTGAGTCTGAGGA
TGAAGAAGATAAGAGAGGAGGAAAGGATAAAAGGGAGAGGTTTTCCCTTG
ACCAAGTGGAAGAGATGGAAAAAGTGTTCCAGCAGTTTCCCTACCCAGAG
GTCGAAGTTCGAGCAGAGCTGGCCACGAGATTCAACGTCAACCCAAAGAG
GGTTCAGGTGTGGTTTCAGCACAGGAGAAACAAGTGGAAGAAGGGGGAGA
AGCCCAGGATGAAAACCACCAGAAGAAGGAAACCGTCTCCCAAACCTTCC
ACCGTCCCCTGTCCGAAGACGTCCCCGCCAGATTTCAAAGGGAAGTGGAC
ACTGTTTTCAGAGGACCAGTTGAAAGAATTAGAGGCAGCTTTCCAAAAGG
ACCGCTTCCTTCCCAAACCGGAGAGAGAGAAGCTCGCCGAACGTTTCAGC
GTGGACCAGAGGAAGGTTGAGATCTGGATCAATAACAGGCGGGCGAAGTG
GCGGAGATCCGGAAAAAGGAAACTGAAAGGTACCGGCAGGAGGGGTCGCG
GCCCCAATCCTCCCAACGCACCGAGCAACACGGCGACTGGAAGTTCTGCT
GCTGACAAGGCCCCCCTGAACAGGAAACGCAAGAACGTTGGAGAAAAAGA
TGGAGCGTCCTCCAGGGGAAAGAAACTCACCAGAGAACTGCGCAACTTGT
TTTCTGCTCATGAACTTGAGGAGTTCGAGAAGTCATACAGCCGTGACCCG
TATCCAGACGTCTCTGATAAGGAGCAGCTGGCCACCAAGCTCAATATCAG
CCTAAGGAGGGTCAAGGTGTGGTTCCAGAATAGGAGAAGGAAGGGAAGAC
CAGGAAGGCCCAGGCTGAAAAGGAAGGCGGAGAGCTCTGAGTCTGAGGAT
GAAGAAGATAAGAGAGGAGGAAAGGATAAAAGGGAGAGGTTTTCCCTTGA
CCAAGTGGAAGAGATGGAAAAAGTGTTCCAGCAGTTTCCCTACCCAGAGG
TCGAAGTTCGAGCAGAGCTGGCCACGAGATTCAACGTCAACCCAAAGAGG
GTTCAGGTGTGGTTTCAGCACAGGAGAAACAAGTGGAAGAAGGGGGAGAA
GCCCAGGATGAAAACCACCAGAAGAAGGAAACCGTCTCCCAAACCTTCCA
CCGTCCCCTGTCCGAAGACGTCCCCGCCAGATTTCAAAGGGAAGTGGACA
CTGTTTTCAGAGGACCAGTTGAAAGAATTAGAGGCAGCTTTCCAAAAGGA
CCGCTTCCTTCCCAAACCGGAGAGAGAGAAGCTCGCCGAACGTTTCAGCG
TGGACCAGAGGAAGGTTGAGATCTGGATCAATAACAGGCGGGCGAAGTGG
CGGAGATCCGGAAAAAGGAAACTGAAAGGTACCGGCAGGAGGGGTCGCGG
CCCCAATCCTCCCAACGCACCGAGCAACACGGCGACTGGAAGTTCTGCTG
CTGACAAGGCCCCCCTGAACAGGAAACGCAAGAACGTTGGAGAAAAAGAT
GGAGCGTCCTCCAGGGGAAAGAAACTCACCAGAGAACTGCGCAACTTGTT
TTCTGCTCATGAACTTGAGGAGTTCGAGAAGTCATACAGCCGTGACCCGT
ATCCAGACGTCTCTGATAAGGAGCAGCTGGCCACCAAGCTCAATATCAGC
CTAAGGAGGGTCAAGGTGTGGTTCCAGAATAGGAGAAGGAAGGGAAGACC
AGGAAGGCCCAGGCTGAAAAGGAAGGCGGAGAGCTCTGAGTCTGAGGATG
AAGAAGATAAGAGAGGAGGAAAGGATAAAAGGGAGAGGTTTTCCCTTGAC
CAAGTGGAAGAGATGGAAAAAGTGTTCCAGCAGTTTCCCTACCCAGAGGT
CGAAGTTCGAGCAGAGCTGGCCACGAGATTCAACGTCAACCCAAAGAGGG
TTCAGGTGTGGTTTCAGCACAGGAGAAACAAGTGGAAGAAGGGGGAGAAG
CCCAGGATGAAAACCACCAGAAGAAGGAAACCGTCTCCCAAACCTTCCAC
CGTCCCCTGTCCGAAGACGTCCCCGCCAGATTTCAAAGGGAAGTGGACAC
TGTTTTCAGAGGACCAGTTGAAAGAATTAGAGGCAGCTTTCCAAAAGGAC
CGCTTCCTTCCCAAACCGGAGAGAGAGAAGCTCGCCGAACGTTTCAGCGT
GGACCAGAGGAAGGTTGAGATCTGGATCAATAACAGGCGGGCGAAGTGGC
GGAGATCCGGAAAAAGGAAACTGAAAGGTACCGGCAGGAGGGGTCGCGGC
CCCAATCCTCCCAACGCACCGAGCAACACGGCGACTGGAAGTTCTGCTGC
TGACAAGGCCCCCCTGAACAGGAAACGCAAGAACGTTGGAGAAAAAGATG
GAGCGTCCTCCAGGGGAAAGAAACTCACCAGAGAACTGCGCAACTTGTTT
TCTGCTCATGAACTTGAGGAGTTCGAGAAGTCATACAGCCGTGACCCGTA
TCCAGACGTCTCTGATAAGGAGCAGCTGGCCACCAAGCTCAATATCAGCC
TAAGGAGGGTCAAGGTGTGGTTCCAGAATAGGAGAAGGAAGGGAAGACCA
GGAAGGCCCAGGCTGAAAAGGAAGGCGGAGAGCTCTGAGTCTGAGGATGA
AGAAGATAAGAGAGGAGGAAAGGATAAAAGGGAGAGGTTTTCCCTTGACC
AAGTGGAAGAGATGGAAAAAGTGTTCCAGCAGTTTCCCTACCCAGAGGTC
GAAGTTCGAGCAGAGCTGGCCACGAGATTCAACGTCAACCCAAAGAGGGT
TCAGGTGTGGTTTCAGCACAGGAGAAACAAGTGGAAGAAGGGGGAGAAGC
CCAGGATGAAAACCACCAGAAGAAGGAAACCGTCTCCCAAACCTTCCACC
GTCCCCTGTCCGAAGACGTCCCCGCCAGATTTCAAAGGGAAGTGGACACT
GTTTTCAGAGGACCAGTTGAAAGAATTAGAGGCAGCTTTCCAAAAGGACC
GCTTCCTTCCCAAACCGGAGAGAGAGAAGCTCGCCGAACGTTTCAGCGTG
GACCAGAGGAAGGTTGAGATCTGGATCAATAACAGGCGGGCGAAGTGGCG
GAGATCCGGAAAAAGGAAACTGAAAGGTACCGGCAGGAGGGGTCGCGGCC
CCAATCCTCCCAACGCACCGAGCAACACGGCGACTGGAAGTTCTGCTGCT
GACAAGGCCCCCCTGAACAGGAAACGCAAGAACGTTGGAGAAAAAGATGG
AGCGTCCTCCAGGGGAAAGAAACTCACCAGAGAACTGCGCAACTTGTTTT
CTGCTCATGAACTTGAGGAGTTCGAGAAGTCATACAGCCGTGACCCGTAT
CCAGACGTCTCTGATAAGGAGCAGCTGGCCACCAAGCTCAATATCAGCCT
AAGGAGGGTCAAGGTGTGGTTCCAGAATAGGAGAAGGAAGGGAAGACCAG
GAAGGCCCAGGCTGAAAAGGAAGGCGGAGAGCTCTGAGTCTGAGGATGAA
GAAGATAAGAGAGGAGGAAAGGATAAAAGGGAGAGGTTTTCCCTTGACCA
AGTGGAAGAGATGGAAAAAGTGTTCCAGCAGTTTCCCTACCCAGAGGTCG
AAGTTCGAGCAGAGCTGGCCACGAGATTCAACGTCAACCCAAAGAGGGTT
CAGGTGTGGTTTCAGCACAGGAGAAACAAGTGGAAGAAGGGGGAGAAGCC
CAGGATGAAAACCACCAGAAGAAGGAAACCGTCTCCCAAACCTTCCACCG
TCCCCTGTCCGAAGACGTCCCCGCCAGATTTCAAAGGGAAGTGGACACTG
TTTTCAGAGGACCAGTTGAAAGAATTAGAGGCAGCTTTCCAAAAGGACCG
CTTCCTTCCCAAACCGGAGAGAGAGAAGCTCGCCGAACGTTTCAGCGTGG
ACCAGAGGAAGGTTGAGATCTGGATCAATAACAGGCGGGCGAAGTGGCGG
AGATCCGGAAAAAGGAAACTGAAAGGTACCGGCAGGAGGGGTCGCGGCCC
CAATCCTCCCAACGCACCGAGCAACACGGCGACTGGAAGTTCTGCTGCTG
ACAAGGCCCCCCTGAACAGGAAACGCAAGAACGTTGGAGAAAAAGATGGA
GCGTCCTCCAGGGGAAAGAAACTCACCAGAGAACTGCGCAACTTGTTTTC
TGCTCATGAACTTGAGGAGTTCGAGAAGTCATACAGCCGTGACCCGTATC
CAGACGTCTCTGATAAGGAGCAGCTGGCCACCAAGCTCAATATCAGCCTA
AGGAGGGTCAAGGTGTGGTTCCAGAATAGGAGAAGGAAGGGAAGACCAGG
AAGGCCCAGGCTGAAAAGGAAGGCGGAGAGCTCTGAGTCTGAGGATGAAG
AAGATAAGAGAGGAGGAAAGGATAAAAGGGAGAGGTTTTCCCTTGACCAA
GTGGAAGAGATGGAAAAAGTGTTCCAGCAGTTTCCCTACCCAGAGGTCGA
AGTTCGAGCAGAGCTGGCCACGAGATTCAACGTCAACCCAAAGAGGGTTC
AGGTGTGGTTTCAGCACAGGAGAAACAAGTGGAAGAAGGGGGAGAAGCCC
AGGATGAAAACCACCAGAAGAAGGAAACCGTCTCCCAAACCTTCCACCGT
CCCCTGTCCGAAGACGTCCCCGCCAGATTTCAAAGGGAAGTGGACACTGT
TTTCAGAGGACCAGTTGAAAGAATTAGAGGCAGCTTTCCAAAAGGACCGC
TTCCTTCCCAAACCGGAGAGAGAGAAGCTCGCCGAACGTTTCAGCGTGGA
CCAGAGGAAGGTTGAGATCTGGATCAATAACAGGCGGGCGAAGTGGCGGA
GATCCGGAAAAAGGAAACTGAAAGGTACCGGCAGGAGGGGTCGCGGCCCC
AATCCTCCCAACGCACCGAGCAACACGGCGACTGGAAGTTCTGCTGCTGA
CAAGGCCCCCCTGAACAGGAAACGCAAGAACGTTGGAGAAAAAGATGGAG
CGTCCTCCAGGGGAAAGAAACTCACCAGAGAACTGCGCAACTTGTTTTCT
GCTCATGAACTTGAGGAGTTCGAGAAGTCATACAGCCGTGACCCGTATCC
AGACGTCTCTGATAAGGAGCAGCTGGCCACCAAGCTCAATATCAGCCTAA
GGAGGGTCAAGGTGTGGTTCCAGAATAGGAGAAGGAAGGGAAGACCAGGA
AGGCCCAGGCTGAAAAGGAAGGCGGAGAGCTCTGAGTCTGAGGATGAAGA
AGATAAGAGAGGAGGAAAGGATAAAAGGGAGAGGTTTTCCCTTGACCAAG
TGGAAGAGATGGAAAAAGTGTTCCAGCAGTTTCCCTACCCAGAGGTCGAA
GTTCGAGCAGAGCTGGCCACGAGATTCAACGTCAACCCAAAGAGGGTTCA
GGTGTGGTTTCAGCACAGGAGAAACAAGTGGAAGAAGGGGGAGAAGCCCA
GGATGAAAACCACCAGAAGAAGGAAACCGTCTCCCAAACCTTCCACCGTC
CCCTGTCCGAAGACGTCCCCGCCAGATTTCAAAGGGAAGTGGACACTGTT
TTCAGAGGACCAGTTGAAAGAATTAGAGGCAGCTTTCCAAAAGGACCGCT
TCCTTCCCAAACCGGAGAGAGAGAAGCTCGCCGAACGTTTCAGCGTGGAC
CAGAGGAAGGTTGAGATCTGGATCAATAACAGGCGGGCGAAGTGGCGGAG
ATCCGGAAAAAGGAAACTGAAAGGTACCGGCAGGAGGGGTCGCGGCCCCA
ATCCTCCCAACGCACCGAGCAACACGGCGACTGGAAGTTCTGCTGCTGAC
AAGGCCCCCCTGAACAGGAAACGCAAGAACGTTGGAGAAAAAGATGGAGC
GTCCTCCAGGGGAAAGAAACTCACCAGAGAACTGCGCAAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL96710gene:BL96710Branchiostoma lanceolatumgene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL96710_cuf1transcript:BL96710_cuf1-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL96710_cuf1-E1BL96710_cuf1-E1-1564476830-130595Branchiostoma lanceolatumexon
BL96710_cuf1-E2BL96710_cuf1-E2-1564476830-130597Branchiostoma lanceolatumexon
BL96710_cuf1-E3BL96710_cuf1-E3-1564476830-130599Branchiostoma lanceolatumexon
BL96710_cuf1-E4BL96710_cuf1-E4-1564476830-130601Branchiostoma lanceolatumexon
BL96710_cuf1-E5BL96710_cuf1-E5-1564476830-130603Branchiostoma lanceolatumexon
BL96710_cuf1-E6BL96710_cuf1-E6-1564476830-130605Branchiostoma lanceolatumexon
BL96710_cuf1-E7BL96710_cuf1-E7-1564476830-130607Branchiostoma lanceolatumexon
BL96710_cuf1-E8BL96710_cuf1-E8-1564476830-130609Branchiostoma lanceolatumexon
BL96710_cuf1-E9BL96710_cuf1-E9-1564476830-130611Branchiostoma lanceolatumexon
BL96710_cuf1-E10BL96710_cuf1-E10-1564476830-130613Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000016genomeSc0000016:2747618..2758846 +
Properties
Property NameValue
Transcript idBL96710_cuf1
Biotypeprotein_coding