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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96705_cuf2 >transcript:BL96705_cuf2-protein ID=transcript:BL96705_cuf2-protein|Name=transcript:BL96705_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=255bp
CSEDYDAPQYGGKVCTTSDVATGSMMCTLFCEGDREFAGRPADAYTCNAL
GVWSALSAASSGPQPLPPGPRPWPDCTGRYRPGRAHIKGEVFYYYDGDCQ
SSIQEIITNFEQIFSDLQSAQPGAGISTQLGTVDIECGSTARVTSDNKRS
VVNLQVLKSTSGFTIKFEVAAITSAQTVTENHQLDLVFALDDVYYEIEDK
VAANQFNLAIGGQVLSASSFEMGFAEIQVNCTDGQLAYQDDFQAYCTDCP
AGTFR Run BLAST on NCBI mRNA from alignment at Sc0000016:2093431..2094720- Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96705_cuf2 ID=transcript:BL96705_cuf2|Name=transcript:BL96705_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=1290bp|location=Sequence derived from alignment at Sc0000016:2093431..2094720- (Branchiostoma lanceolatum)
CTTGCAGCGAAGACTACGATGCTCCCCAGTACGGTGGGAAGGTGTGTACG
ACCTCTGACGTCGCCACGGGTTCCATGATGTGCACGCTGTTCTGTGAAGG
AGACAGGGAGTTTGCAGGACGTCCGGCAGATGCCTACACGTGTAACGCAC
TCGGTGTCTGGAGTGCCTTGTCGGCAGCGTCCAGTGGTCCGCAGCCACTG
CCGCCCGGGCCTAGACCCTGGCCAGACTGCACAGGTATGTACCTGTTTTA
CGTTTTCCCTCTGTATGCAAATAGACGTCGGCAAACCCGCGCATCATATA
CTGTAGATACTGTTACAGTAGCTATATACCATTACTTGCCATACTTTGTA
CCTTGTACAATTTCTGTGAAAAAAATATTATTGAGACCATGCAAAATAAA
TTATGCCGAGTCATGCTTATTGCTTGACATGTAAACATGCAAAGCTTCCA
TTACTGTATTAACAGCTCAGCATGAGAGAAAAAGCGTGCTCCGAAAATGT
ATGTAGGTGGTAGCCCATAACCACATGCTGTTGTGTACTGGAGACGACTT
AGTGAACCATCTTACAAACTACCTTATATCAATAGGCAGATACCGTCCAG
GAAGAGCACACATCAAGGGAGAGGTCTTTTACTATTACGACGGAGACTGC
CAGAGCAGCATTCAGGAGATCATCACTAACTTTGAGCAGATCTTCAGCGA
CCTGCAGTCGGCTCAGCCAGGTGCTGGCATCTCTACGCAGCTGGGGACAG
TCGACATCGAATGTGGATCTACTGCCAGAGTTACCAGCGACAACAAGAGG
TCCGTTGTCAACCTACAGGTTTTGAAAAGCACAAGTGGCTTCACCATCAA
GTTTGAAGTAGCCGCCATTACTTCCGCGCAAACCGTCACCGAAAATCATC
AGCTTGACCTGGTTTTCGCTTTGGACGATGTCTACTACGAGATCGAAGAC
AAGGTTGCTGCAAACCAGTTCAACCTGGCAATCGGAGGACAGGTGTTGAG
CGCTTCGTCATTCGAGATGGGCTTCGCAGAGATACAGGTCAACTGCACGG
ACGGACAGCTAGCGTACCAGGACGACTTTCAGGCCTACTGCAGTAAGTAA
ATTCTGATGATATAATAATCGTGTGGTGGCCGTTATTTACCAACAGTCGT
GATATCATCTTGTCAATTCCCTTAGCTTTAGATAGCTTGGGAATGAATGG
ATTTGTAAACCCGTGCGTTATACATTTCACAAATGATCGTGTACAAATTC
GTCTCATCCCACAGCTGACTGCCCTGCTGGTACCTTCCGC Coding sequence (CDS) from alignment at Sc0000016:2093431..2094720- >transcript:BL96705_cuf2 ID=transcript:BL96705_cuf2|Name=transcript:BL96705_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=2295bp|location=Sequence derived from alignment at Sc0000016:2093431..2094720- (Branchiostoma lanceolatum)
TGCAGCGAAGACTACGATGCTCCCCAGTACGGTGGGAAGGTGTGTACGAC
CTCTGACGTCGCCACGGGTTCCATGATGTGCACGCTGTTCTGTGAAGGAG
ACAGGGAGTTTGCAGGACGTCCGGCAGATGCCTACACGTGTAACGCACTC
GGTGTCTGGAGTGCCTTGTCGGCAGCGTCCAGTGGTCCGCAGCCACTGCC
GCCCGGGCCTAGACCCTGGCCAGACTGCACAGGCAGATACCGTCCAGGAA
GAGCACACATCAAGGGAGAGGTCTTTTACTATTACGACGGAGACTGCCAG
AGCAGCATTCAGGAGATCATCACTAACTTTGAGCAGATCTTCAGCGACCT
GCAGTCGGCTCAGCCAGGTGCTGGCATCTCTACGCAGCTGGGGACAGTCG
ACATCGAATGTGGATCTACTGCCAGAGTTACCAGCGACAACAAGAGGTCC
GTTGTCAACCTACAGGTTTTGAAAAGCACAAGTGGCTTCACCATCAAGTT
TGAAGTAGCCGCCATTACTTCCGCGCAAACCGTCACCGAAAATCATCAGC
TTGACCTGGTTTTCGCTTTGGACGATGTCTACTACGAGATCGAAGACAAG
GTTGCTGCAAACCAGTTCAACCTGGCAATCGGAGGACAGGTGTTGAGCGC
TTCGTCATTCGAGATGGGCTTCGCAGAGATACAGGTCAACTGCACGGACG
GACAGCTAGCGTACCAGGACGACTTTCAGGCCTACTGCACTGACTGCCCT
GCTGGTACCTTCCGCTGCAGCGAAGACTACGATGCTCCCCAGTACGGTGG
GAAGGTGTGTACGACCTCTGACGTCGCCACGGGTTCCATGATGTGCACGC
TGTTCTGTGAAGGAGACAGGGAGTTTGCAGGACGTCCGGCAGATGCCTAC
ACGTGTAACGCACTCGGTGTCTGGAGTGCCTTGTCGGCAGCGTCCAGTGG
TCCGCAGCCACTGCCGCCCGGGCCTAGACCCTGGCCAGACTGCACAGGCA
GATACCGTCCAGGAAGAGCACACATCAAGGGAGAGGTCTTTTACTATTAC
GACGGAGACTGCCAGAGCAGCATTCAGGAGATCATCACTAACTTTGAGCA
GATCTTCAGCGACCTGCAGTCGGCTCAGCCAGGTGCTGGCATCTCTACGC
AGCTGGGGACAGTCGACATCGAATGTGGATCTACTGCCAGAGTTACCAGC
GACAACAAGAGGTCCGTTGTCAACCTACAGGTTTTGAAAAGCACAAGTGG
CTTCACCATCAAGTTTGAAGTAGCCGCCATTACTTCCGCGCAAACCGTCA
CCGAAAATCATCAGCTTGACCTGGTTTTCGCTTTGGACGATGTCTACTAC
GAGATCGAAGACAAGGTTGCTGCAAACCAGTTCAACCTGGCAATCGGAGG
ACAGGTGTTGAGCGCTTCGTCATTCGAGATGGGCTTCGCAGAGATACAGG
TCAACTGCACGGACGGACAGCTAGCGTACCAGGACGACTTTCAGGCCTAC
TGCACTGACTGCCCTGCTGGTACCTTCCGCTGCAGCGAAGACTACGATGC
TCCCCAGTACGGTGGGAAGGTGTGTACGACCTCTGACGTCGCCACGGGTT
CCATGATGTGCACGCTGTTCTGTGAAGGAGACAGGGAGTTTGCAGGACGT
CCGGCAGATGCCTACACGTGTAACGCACTCGGTGTCTGGAGTGCCTTGTC
GGCAGCGTCCAGTGGTCCGCAGCCACTGCCGCCCGGGCCTAGACCCTGGC
CAGACTGCACAGGCAGATACCGTCCAGGAAGAGCACACATCAAGGGAGAG
GTCTTTTACTATTACGACGGAGACTGCCAGAGCAGCATTCAGGAGATCAT
CACTAACTTTGAGCAGATCTTCAGCGACCTGCAGTCGGCTCAGCCAGGTG
CTGGCATCTCTACGCAGCTGGGGACAGTCGACATCGAATGTGGATCTACT
GCCAGAGTTACCAGCGACAACAAGAGGTCCGTTGTCAACCTACAGGTTTT
GAAAAGCACAAGTGGCTTCACCATCAAGTTTGAAGTAGCCGCCATTACTT
CCGCGCAAACCGTCACCGAAAATCATCAGCTTGACCTGGTTTTCGCTTTG
GACGATGTCTACTACGAGATCGAAGACAAGGTTGCTGCAAACCAGTTCAA
CCTGGCAATCGGAGGACAGGTGTTGAGCGCTTCGTCATTCGAGATGGGCT
TCGCAGAGATACAGGTCAACTGCACGGACGGACAGCTAGCGTACCAGGAC
GACTTTCAGGCCTACTGCACTGACTGCCCTGCTGGTACCTTCCGC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000016 | genome | Sc0000016:2093431..2094720 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96705_cuf2 |
| Biotype | protein_coding |
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