transcript:BL96478_cuf2 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL96478_cuf2
Unique Nametranscript:BL96478_cuf2
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL96478_cuf2

>transcript:BL96478_cuf2-protein ID=transcript:BL96478_cuf2-protein|Name=transcript:BL96478_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=426bp
KAGLYVERTSNGFYIDETPPVMLKEPQFDLTQGTIVPDTQVWRTALSLKW
EFVDPESSIERQHLSVFTHHQAGIDIEPFEIAGSVRDYCFTNLSLHDGDT
YYVRVVACNGAKLCTSGETSGVLVDSTPPTVGMLAIQTDHAAQLWRHRDG
WMTYYQQNVTSPPHVRLAWLGFTDMHTGIHNYHVTIGSTFGGTDLTRDCI
VLPHQVGPSHEDEGAVQVSVVNITRNLADREHIYVTLWAVNKVGLQSVVA
HAALEAVPSNPHSGLLSLVRRCDVHSCEGHCTCAPQNQKCDPPLAGCLSV
ANRTEYQHVLVYDGWTTAPDTNITLSQCTLAGRWEALSGGIPVQRYEWSA
GQEGKAAGTGVFDLTNDRIWYDVGLRTSAVLSLRRDRPQLKPHVRYVFHV
RAWYSSDVYLDFHSDGVITDFTPPTV
Run BLAST on NCBI

mRNA from alignment at xpSc0039678:160519..167242+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL96478_cuf2 ID=transcript:BL96478_cuf2|Name=transcript:BL96478_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=6724bp|location=Sequence derived from alignment at xpSc0039678:160519..167242+ (Branchiostoma lanceolatum)
ACAAAGCAGGTCTGTCAGTTTTTTTTTCTTGTGTAAACTTAAGGTTACTA CAAGCGAGTTCATTCCGCTTTGATTAGATATTTATTATTATTTGTATACT CATGATCGTTATCATAGTCATCATCATACTCGTTGTCGTCATCATCAGCA TTATCATAATCATCATCATAATAATCATCATTATCCGTCGGCCATCAAGG TCAGAGTCAAAGGTGTAACGAGGTGCATTCTTGTTGCAGGCTTGTATGTT GAGAGAACGTCCAACGGCTTCTATATTGATGAGACCCCTCCAGTGATGCT GAAAGAACCACAGTTTGATCTGACACAGGGAACAATTGTTCCTGACACTC AGGTTATTCATTTGTCTATAATATTTTTCTTAATAATCTCATTTATTGGT AGGTTATTCAATTATTTTTCGGAATATGATTAGAGTTTTTCTAACAATAT GCATTGGTTATTGAAGATGAAATTTATCGTCTGTATTTAAACTATCACAA TGTACTGCTTTGCGTGTATGATTTATATAGGGTGTACCGACTCCTTCAAT CGGTAGCATTCATAAGAATGTTATCATTGGATATCCATTGTACAGCAAGT GTGACTGATCAATATAGCGAATCTAAAATGTTTGTTCCCGACGTATTTAT CCTCCAGGTATGGAGAACAGCCTTGTCTCTGAAGTGGGAGTTCGTTGACC CCGAGAGTTCAATCGAGCGGCAGCACCTGTCAGTCTTCACTCACCACCAG GCAGGGATTGATATAGAACCTTTTGAGGTAAGGAGCTAATAAGAGTTTGG CAAAGATAAAGAGCGTTCGGAATACAAAATTAAAGAAACTTAGAGAGCTA AGGATGCTCACAAGACGCAAAACGCAGTGGACGAATTCGAAGGTGAAGAA ATAGACAAATGAATTGAAGAAAAACTGAATGCAACTCAATGCAGCTGCAG GACGTTTAAATGACTGCAGATGCAGAAATAACTGGATTTTGATGAAGATG ATGATGACAAAAGAACGTTTTAAAACGTAGGTTTTGCTTCTTGTCTGATG ATTTCTTTTATATTGCAACTCCAACATGAAAATGTTTTCTTTTTTTTCAA TAATTTAGATAGCCGGTTCCGTCCGAGACTATTGCTTCACTAACTTGTCG TTGCATGACGGAGACACCTACTACGTACGGGTGGTGGCCTGTAACGGCGC TAAGCTGTGTACATCAGGGGAGACGAGTGGGGTTCTGGTAGGTTTTCTAA TGCTATTAGTTAAGACAAATTTTCAGAAAATCTTTCACATTACATTATCT TTAACGTTGTGAAGGTCAAACTGATGGAGGCACTCAAACTATGAACTATT CATGTTGGTGTTCTTCGGGTTTGTCTCTGCAACAAATATTCGGCAGTCTT CTATTTCCTATAGGTTTTGCTCTTAAATTAAGCATTACGGATTTTAGCCG CAAAAATATAAAAAAATCTGTGGAAATTAGAAATAAAAGATATTTGCGGT AGGTCAATGAAGGTAATAAGATACACAATACAAACGTTACTTAGTCAACT GGACACGTTAAACGGTCGGACGTTTCAAACAGCATCCACTATATTTCGTC ACACTCCATTCAAAGCCACTGATTCAGTACAGCTAGTCGATACTTCCCGA AACGTTCGACCGTTTACAACATCTATCCAGATTCTTGGGTATGTTGGATG TATTTGTAGTAATGACACCTATGGCAGAAGTTATAATATACTGTGCTACC ATCACTGCATCATCGTCCCGTCCACGTTGATGTCCTTCTCCCCAGGTGGA CTCCACCCCTCCCACAGTGGGGATGTTGGCCATACAGACCGACCATGCTG CCCAGCTATGGCGCCATCGTGACGGTTGGATGACGTATTATCAACAGAAC GTCACTTCCCCTCCTCACGTCCGACTGGCCTGGCTCGGCTTCACAGACAT GCACACTGGGATCCACAACTATCACGTGACTATCGGATCCACGTTTGGTG GCACAGACCTCACGGTGAGTTTCCTGAACATGATATAATATAGGATAGAT TTGTTATGAACTTTGTACATGAATTAATAACTAAAAGAAGATACCGAGCA GACGGAGAAGGAAGCATAATCAATTTAGATGCTACATGAAATTGCTAGTC ATTGATAAGGTGGAGTTGATTTTAGCACAGGCTCAACACAGTTTCTTGAT TTACAGGTATTGTCACAATATTATGAGAGGGCCATATCATTGAAGCGAAT ATCAGTAGAATCTTANCCGAGCAAGCTGTTCCACGAAAGGCTTTTCATTT AACGTTATTTGCGTCATATCGTAGCCTGGAGTCCAGACTTCTTAGCTTTA GTCCTCTACCCGAGCTCCGGAGACGGAAAGCGGACTAAAGCTACGAAGCC TGGACGGCGGGGGCGGAGCTTGGGTAGCGGACTAAAACTAAGAAGGCTCG ACTCATGTCGGATAACACGTTTACGCAAAGATGCTTCTGCTGGAATCTTA TCACCCACCAACATGGTTACCGAGAATTCGAATTGTGATTATTACGATAC CATTCAGAAGCCATGATGCATGTATTGACGCAATATAAAGGCCATAACAT TGAAGCAAAAATCAGCGTAATCAATTATCATCGATCCTTTTCAAACTTTA TTCCAGCGAGACTGCATCGTCCTCCCACACCAGGTCGGTCCGTCCCACGA AGACGAAGGCGCAGTACAAGTCTCTGTAGTGAACATCACACGGAACCTGG CTGACAGGGAGCACATTTATGTCACACTTTGGGCAGTTAACAAGGTTGTT TTTACAAACTATTCAATGGTGCAGTTCGGGTATGTTTTTTTTGTATGCAA TTGTCATGTTTTCTTTTTAAATCATGAATGAGAAGTTTGTAGGTCTTATT TTGTTATTCAAATAACCTTGATAGGCATGTTTTGTTCTTTTCATCTCCAT TTTCAAGATATTGTTATGGGCATGTCTGTGTGTTTGTGTTTCTGGATTTT CTTAGTCAGCATAACTCGAGAACCGCTGGAAGGATTACGATGATATTTGG GTATATGCCGTGGGTAAGTATTGGGAAGATGAAGATGTACATAACAAGGC ATAGATTATGTAAATATGGAAGTCATTTGCATAATCAGAATAGTTCATGG AGATCTGAGGTCTTCGAAAATTTGTTTTTATAATTTTTTAAATCAAAATT TCCATTTTTTTACCGTCTTAGTACAATGTAGTAAATAAATCCCTTTGAAA TAACGGGTTGACGGATCGTCATAATGTTTGGTGTAGATAGCTTAAGTGAT GATTTACATAGAGGAAAGATTATAAATCCGCTGCATTCAATTATACCGTG TATGACTCTCAAACGTGTGACATTATGTAACAGAGAAATAGAGAAATATC GATAGATATCAATTATGTAACTAGATACCTAATTTGCATCATTCATGGCA AAATTCCATAGGGGTAAATGGTAGGGTTTTCATTCTTGCAGCATTCTAAA GTTGAGTAAGTCCACACCATCTTAATTTTATAAATGACATCGTCTGGTGA CCGGAAAACTAATGCGCGCGGGCGAAAAAAAAAAGAATAAAAATTCAGCC GGACAAAAATGCTGCTAAACCACATGTACAGACTACAAAGCTGGTATTGT AAATTGAACCATAGAACACAGTGTATCAAACAACCAGTTTTTATTTGTAA GCTCAGACTCAGCTCAAGTGCTCAAACTATTAGAAGGTATTTGGCTCCAA GGACTGTGGATGATATATGAGTGTTATGAGAATGCTAATGAGGACAGTTT CAACATACATGGCATTGAACTCCATATCAAGCAGTCCATAGCTCACACTT ACAAATGTCGCTGTGAGACTTCTATACCAATGCTTCAACTCCTCTCCCAT GTCTCTCATCGTTCTACAAGAAACGTGTGAGATCCACTCAGCCTGAATAG GTCGTGTTTGAAATTGTCTGGGGACGTTTATACTTTGAAAAACTTGTGCT ATTTGATTAGATGATTAACTGATGTAATAGTTCATGCACTTATAAGGACC TTATTTGCATAATGAATGAGAAACATGTATGATATGTCACTCGAAAAGGG TTAACATAAAATGGCGAGGCCGTAGAACTCTAGTGGTATATTTAAAACGC TATGACATAACACTTTGGTGTGAATATATTGTTTTTCTGTACAACAGGTC GGATTACAGAGCGTCGTGGCCCATGCTGCTCTGGAAGCGGTCCCCTCAAA CCCGCACAGTGGCCTCCTGTCATTGGTCAGACGGTGTGACGTACATTCAT GTGAGGGGCACTGCACATGCGCACCACAGAACCAGAAATGTGATCCACCT CTCGCCGGATGTCTCAGCGTCGCAAGTTAGTTTACGAACACTCGTCGAAA TACATAACGACACGTTACTGATACACCTCTCGATTTTTATGCTGCATAAA TGTAGTGATTTCTTTGATGGAAAAATTGTTTACCGACGACTATCACGCAA AAAGTCAACTACGTGACTATAAGGTTTGATAAACCTCAAAACTGCAACCG ATTATAAATCCGTGCTATTTTTTTCCATAGTGGGTTTGTAATACTGACTA ATGTATATAGAATTTATTTGCGCGTACTTTGTAACTCAGGCATTCCTCAA ACCGACATCTGACACGTTTCCATCTTACCTCAGACCGTACAGAGTACCAG CATGTTCTTGTGTACGACGGTTGGACGACAGCACCTGACACTAACATCAC ACTGTCGCAGTGCACACTGGCCGGAAGATGGGAGGCATTGTCGGGGGGCA TACCGGTTCAAAGGTAACGTCGTGGTATCGTCGTTGGCCGTCGTACGATT TTGATCTAGTTAGTATTTTTAAGCAGGCTGTAGCAGAGCCAACTGTCGGC AAGGATCCAAGGCAGTCGAATTTTGTACGGACAAGCACGACTATCCCAAG AAAGATGTCCTCTGCGATCGCGCGACGATCGTACGAAAAATATGATCGGG CCTTAACAAGCCAGTTTTCACAATTAGAACGAGCTAAAATATCATCCGGA CAGGCAATCACTTTTGCATTGGGTTGATGATAATGAAGTGACGAATGTCT TACTATGCCAATGAGTTGCGGGTATATTCAACGTAAATACTAAAATCAAT ATGATCACAGGTATGAGTGGAGTGCAGGACAGGAGGGTAAGGCGGCAGGT ACCGGGGTGTTTGATCTAACTAACGACAGGATTTGGTACGACGTCGGACT GAGAACTTCAGCCGTTTTGAGCCTCAGGCGGGATAGACGTAGGTAGAAAT AAATGAAACCCATTTGCCAAATCATTACTTTTATCTTACTTTGTAATGTC GTCTAAACTATGATACATCTTCTGTGTTTTGCTTTAAAGGAGTCCTACAC TCCAGAGGGGGGTTTTATTTTCCAATAAATGATAATTCTAGGAAGTAAAA ATTGATATTTTTTTACAGTATACGATAAAGTACCCACTAGTCCCGTGCGC ATCAAAAAGCATTCAGTATTCTACCGAATTCCACAGGTGACCCTCTATTT TCTGATTAGTTAAATTAAACAACCTCAGCCTATGGCCTAATACAGTGTGC CTGACAAGTCCTGAAAATAGTTAGATTATAAAAAGAATGTCAGGGTGGTT AAGAAAAACTAGTCTTGCTATGTGTTCTTTTATATCTTATTAACAAATGG CCTTCTTATTGTGCTTAACCACCCTCATTTATGCCGAAAATATCCAGGAT TAATAATGTATGTCTGCGCATAGGGAATACATGGGTAGGGTCTTCACGGG TTTAATTAGTATCATATTGTTTTAAAAAACAGACCTTGTGCAATTAACCA CAAGCAGAATTCTGTAAAAAGTCGGCTGATTATGTAGTAATTGATACATA ATCTAGTGGAAAATAACACCGCCTTCTGGAGCTTAGGACTCCTTTAAGCA CAACTTTGGTGGGCACAAATTTGATACAATCATGTTTTGACGTAACGATA CTATTTAAGCAGAAACGACTTTTGCTCCCTTGCCTACCTTGCCTATGTGC TCAGGCCAGAAACTGGCCCCTTGCTTTTCAGGAGGATCCTCCAAGCAGTC CTGCCCCTTGCCCTAGCCTCTGCTTCCCGACTGTTTAAGCCCGTGTCCTT CACAATTTGGTCTTTCCATCTCTTCGGTGGTCTTCCCCGGGGTCTGGGGG TAGCGAACTCCTGGCTGTAGGCTTTGTAGACTAGTGTTTGTGGGGTTCGT CTTATGACGTGATCAAACCACCTCAGCCTTCTCATCTGTACCATTTCCAC GATGGTCTTTTTTGCCCCGAGTTGGGCTCTGATTTCAACATTTGGTATGC GATCACGGAGCGTGATGCAGAGAATTGCCCGTAGGCATCTCATTTCGAAG GCTAATAGGAAAAGTTCATCTGTCTTTTTTAAGGTCCAAGTTTCACAAAC ATATGTGGCTATTGGGAGTATAAGTGCCCTAAAGAGGCGCACTTTCAGGC ATCTACCGATGTCCTTGCGGTTCCAAACTGTTTTTCTTAGTCGACCAAAT GCTGAGGCAGCAAGTGATAACCTTCTCTTAATGTCATTTGTGACTTTTGC TCCCAGCACAATTAAAACCACACGTCAGATACGTGTTCCACGTGCGAGCC TGGTACAGCAGTGACGTCTATCTGGACTTCCACTCAGACGGCGTCATCAC AGACTTCACACCTCCAACTGTGTC

Coding sequence (CDS) from alignment at xpSc0039678:160519..167242+

>transcript:BL96478_cuf2 ID=transcript:BL96478_cuf2|Name=transcript:BL96478_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=12780bp|location=Sequence derived from alignment at xpSc0039678:160519..167242+ (Branchiostoma lanceolatum)
AAAGCAGGCTTGTATGTTGAGAGAACGTCCAACGGCTTCTATATTGATGA
GACCCCTCCAGTGATGCTGAAAGAACCACAGTTTGATCTGACACAGGGAA
CAATTGTTCCTGACACTCAGGTATGGAGAACAGCCTTGTCTCTGAAGTGG
GAGTTCGTTGACCCCGAGAGTTCAATCGAGCGGCAGCACCTGTCAGTCTT
CACTCACCACCAGGCAGGGATTGATATAGAACCTTTTGAGATAGCCGGTT
CCGTCCGAGACTATTGCTTCACTAACTTGTCGTTGCATGACGGAGACACC
TACTACGTACGGGTGGTGGCCTGTAACGGCGCTAAGCTGTGTACATCAGG
GGAGACGAGTGGGGTTCTGGTGGACTCCACCCCTCCCACAGTGGGGATGT
TGGCCATACAGACCGACCATGCTGCCCAGCTATGGCGCCATCGTGACGGT
TGGATGACGTATTATCAACAGAACGTCACTTCCCCTCCTCACGTCCGACT
GGCCTGGCTCGGCTTCACAGACATGCACACTGGGATCCACAACTATCACG
TGACTATCGGATCCACGTTTGGTGGCACAGACCTCACGCGAGACTGCATC
GTCCTCCCACACCAGGTCGGTCCGTCCCACGAAGACGAAGGCGCAGTACA
AGTCTCTGTAGTGAACATCACACGGAACCTGGCTGACAGGGAGCACATTT
ATGTCACACTTTGGGCAGTTAACAAGGTCGGATTACAGAGCGTCGTGGCC
CATGCTGCTCTGGAAGCGGTCCCCTCAAACCCGCACAGTGGCCTCCTGTC
ATTGGTCAGACGGTGTGACGTACATTCATGTGAGGGGCACTGCACATGCG
CACCACAGAACCAGAAATGTGATCCACCTCTCGCCGGATGTCTCAGCGTC
GCAAACCGTACAGAGTACCAGCATGTTCTTGTGTACGACGGTTGGACGAC
AGCACCTGACACTAACATCACACTGTCGCAGTGCACACTGGCCGGAAGAT
GGGAGGCATTGTCGGGGGGCATACCGGTTCAAAGGTATGAGTGGAGTGCA
GGACAGGAGGGTAAGGCGGCAGGTACCGGGGTGTTTGATCTAACTAACGA
CAGGATTTGGTACGACGTCGGACTGAGAACTTCAGCCGTTTTGAGCCTCA
GGCGGGATAGACCACAATTAAAACCACACGTCAGATACGTGTTCCACGTG
CGAGCCTGGTACAGCAGTGACGTCTATCTGGACTTCCACTCAGACGGCGT
CATCACAGACTTCACACCTCCAACTGTGAAAGCAGGCTTGTATGTTGAGA
GAACGTCCAACGGCTTCTATATTGATGAGACCCCTCCAGTGATGCTGAAA
GAACCACAGTTTGATCTGACACAGGGAACAATTGTTCCTGACACTCAGGT
ATGGAGAACAGCCTTGTCTCTGAAGTGGGAGTTCGTTGACCCCGAGAGTT
CAATCGAGCGGCAGCACCTGTCAGTCTTCACTCACCACCAGGCAGGGATT
GATATAGAACCTTTTGAGATAGCCGGTTCCGTCCGAGACTATTGCTTCAC
TAACTTGTCGTTGCATGACGGAGACACCTACTACGTACGGGTGGTGGCCT
GTAACGGCGCTAAGCTGTGTACATCAGGGGAGACGAGTGGGGTTCTGGTG
GACTCCACCCCTCCCACAGTGGGGATGTTGGCCATACAGACCGACCATGC
TGCCCAGCTATGGCGCCATCGTGACGGTTGGATGACGTATTATCAACAGA
ACGTCACTTCCCCTCCTCACGTCCGACTGGCCTGGCTCGGCTTCACAGAC
ATGCACACTGGGATCCACAACTATCACGTGACTATCGGATCCACGTTTGG
TGGCACAGACCTCACGCGAGACTGCATCGTCCTCCCACACCAGGTCGGTC
CGTCCCACGAAGACGAAGGCGCAGTACAAGTCTCTGTAGTGAACATCACA
CGGAACCTGGCTGACAGGGAGCACATTTATGTCACACTTTGGGCAGTTAA
CAAGGTCGGATTACAGAGCGTCGTGGCCCATGCTGCTCTGGAAGCGGTCC
CCTCAAACCCGCACAGTGGCCTCCTGTCATTGGTCAGACGGTGTGACGTA
CATTCATGTGAGGGGCACTGCACATGCGCACCACAGAACCAGAAATGTGA
TCCACCTCTCGCCGGATGTCTCAGCGTCGCAAACCGTACAGAGTACCAGC
ATGTTCTTGTGTACGACGGTTGGACGACAGCACCTGACACTAACATCACA
CTGTCGCAGTGCACACTGGCCGGAAGATGGGAGGCATTGTCGGGGGGCAT
ACCGGTTCAAAGGTATGAGTGGAGTGCAGGACAGGAGGGTAAGGCGGCAG
GTACCGGGGTGTTTGATCTAACTAACGACAGGATTTGGTACGACGTCGGA
CTGAGAACTTCAGCCGTTTTGAGCCTCAGGCGGGATAGACCACAATTAAA
ACCACACGTCAGATACGTGTTCCACGTGCGAGCCTGGTACAGCAGTGACG
TCTATCTGGACTTCCACTCAGACGGCGTCATCACAGACTTCACACCTCCA
ACTGTGAAAGCAGGCTTGTATGTTGAGAGAACGTCCAACGGCTTCTATAT
TGATGAGACCCCTCCAGTGATGCTGAAAGAACCACAGTTTGATCTGACAC
AGGGAACAATTGTTCCTGACACTCAGGTATGGAGAACAGCCTTGTCTCTG
AAGTGGGAGTTCGTTGACCCCGAGAGTTCAATCGAGCGGCAGCACCTGTC
AGTCTTCACTCACCACCAGGCAGGGATTGATATAGAACCTTTTGAGATAG
CCGGTTCCGTCCGAGACTATTGCTTCACTAACTTGTCGTTGCATGACGGA
GACACCTACTACGTACGGGTGGTGGCCTGTAACGGCGCTAAGCTGTGTAC
ATCAGGGGAGACGAGTGGGGTTCTGGTGGACTCCACCCCTCCCACAGTGG
GGATGTTGGCCATACAGACCGACCATGCTGCCCAGCTATGGCGCCATCGT
GACGGTTGGATGACGTATTATCAACAGAACGTCACTTCCCCTCCTCACGT
CCGACTGGCCTGGCTCGGCTTCACAGACATGCACACTGGGATCCACAACT
ATCACGTGACTATCGGATCCACGTTTGGTGGCACAGACCTCACGCGAGAC
TGCATCGTCCTCCCACACCAGGTCGGTCCGTCCCACGAAGACGAAGGCGC
AGTACAAGTCTCTGTAGTGAACATCACACGGAACCTGGCTGACAGGGAGC
ACATTTATGTCACACTTTGGGCAGTTAACAAGGTCGGATTACAGAGCGTC
GTGGCCCATGCTGCTCTGGAAGCGGTCCCCTCAAACCCGCACAGTGGCCT
CCTGTCATTGGTCAGACGGTGTGACGTACATTCATGTGAGGGGCACTGCA
CATGCGCACCACAGAACCAGAAATGTGATCCACCTCTCGCCGGATGTCTC
AGCGTCGCAAACCGTACAGAGTACCAGCATGTTCTTGTGTACGACGGTTG
GACGACAGCACCTGACACTAACATCACACTGTCGCAGTGCACACTGGCCG
GAAGATGGGAGGCATTGTCGGGGGGCATACCGGTTCAAAGGTATGAGTGG
AGTGCAGGACAGGAGGGTAAGGCGGCAGGTACCGGGGTGTTTGATCTAAC
TAACGACAGGATTTGGTACGACGTCGGACTGAGAACTTCAGCCGTTTTGA
GCCTCAGGCGGGATAGACCACAATTAAAACCACACGTCAGATACGTGTTC
CACGTGCGAGCCTGGTACAGCAGTGACGTCTATCTGGACTTCCACTCAGA
CGGCGTCATCACAGACTTCACACCTCCAACTGTGAAAGCAGGCTTGTATG
TTGAGAGAACGTCCAACGGCTTCTATATTGATGAGACCCCTCCAGTGATG
CTGAAAGAACCACAGTTTGATCTGACACAGGGAACAATTGTTCCTGACAC
TCAGGTATGGAGAACAGCCTTGTCTCTGAAGTGGGAGTTCGTTGACCCCG
AGAGTTCAATCGAGCGGCAGCACCTGTCAGTCTTCACTCACCACCAGGCA
GGGATTGATATAGAACCTTTTGAGATAGCCGGTTCCGTCCGAGACTATTG
CTTCACTAACTTGTCGTTGCATGACGGAGACACCTACTACGTACGGGTGG
TGGCCTGTAACGGCGCTAAGCTGTGTACATCAGGGGAGACGAGTGGGGTT
CTGGTGGACTCCACCCCTCCCACAGTGGGGATGTTGGCCATACAGACCGA
CCATGCTGCCCAGCTATGGCGCCATCGTGACGGTTGGATGACGTATTATC
AACAGAACGTCACTTCCCCTCCTCACGTCCGACTGGCCTGGCTCGGCTTC
ACAGACATGCACACTGGGATCCACAACTATCACGTGACTATCGGATCCAC
GTTTGGTGGCACAGACCTCACGCGAGACTGCATCGTCCTCCCACACCAGG
TCGGTCCGTCCCACGAAGACGAAGGCGCAGTACAAGTCTCTGTAGTGAAC
ATCACACGGAACCTGGCTGACAGGGAGCACATTTATGTCACACTTTGGGC
AGTTAACAAGGTCGGATTACAGAGCGTCGTGGCCCATGCTGCTCTGGAAG
CGGTCCCCTCAAACCCGCACAGTGGCCTCCTGTCATTGGTCAGACGGTGT
GACGTACATTCATGTGAGGGGCACTGCACATGCGCACCACAGAACCAGAA
ATGTGATCCACCTCTCGCCGGATGTCTCAGCGTCGCAAACCGTACAGAGT
ACCAGCATGTTCTTGTGTACGACGGTTGGACGACAGCACCTGACACTAAC
ATCACACTGTCGCAGTGCACACTGGCCGGAAGATGGGAGGCATTGTCGGG
GGGCATACCGGTTCAAAGGTATGAGTGGAGTGCAGGACAGGAGGGTAAGG
CGGCAGGTACCGGGGTGTTTGATCTAACTAACGACAGGATTTGGTACGAC
GTCGGACTGAGAACTTCAGCCGTTTTGAGCCTCAGGCGGGATAGACCACA
ATTAAAACCACACGTCAGATACGTGTTCCACGTGCGAGCCTGGTACAGCA
GTGACGTCTATCTGGACTTCCACTCAGACGGCGTCATCACAGACTTCACA
CCTCCAACTGTGAAAGCAGGCTTGTATGTTGAGAGAACGTCCAACGGCTT
CTATATTGATGAGACCCCTCCAGTGATGCTGAAAGAACCACAGTTTGATC
TGACACAGGGAACAATTGTTCCTGACACTCAGGTATGGAGAACAGCCTTG
TCTCTGAAGTGGGAGTTCGTTGACCCCGAGAGTTCAATCGAGCGGCAGCA
CCTGTCAGTCTTCACTCACCACCAGGCAGGGATTGATATAGAACCTTTTG
AGATAGCCGGTTCCGTCCGAGACTATTGCTTCACTAACTTGTCGTTGCAT
GACGGAGACACCTACTACGTACGGGTGGTGGCCTGTAACGGCGCTAAGCT
GTGTACATCAGGGGAGACGAGTGGGGTTCTGGTGGACTCCACCCCTCCCA
CAGTGGGGATGTTGGCCATACAGACCGACCATGCTGCCCAGCTATGGCGC
CATCGTGACGGTTGGATGACGTATTATCAACAGAACGTCACTTCCCCTCC
TCACGTCCGACTGGCCTGGCTCGGCTTCACAGACATGCACACTGGGATCC
ACAACTATCACGTGACTATCGGATCCACGTTTGGTGGCACAGACCTCACG
CGAGACTGCATCGTCCTCCCACACCAGGTCGGTCCGTCCCACGAAGACGA
AGGCGCAGTACAAGTCTCTGTAGTGAACATCACACGGAACCTGGCTGACA
GGGAGCACATTTATGTCACACTTTGGGCAGTTAACAAGGTCGGATTACAG
AGCGTCGTGGCCCATGCTGCTCTGGAAGCGGTCCCCTCAAACCCGCACAG
TGGCCTCCTGTCATTGGTCAGACGGTGTGACGTACATTCATGTGAGGGGC
ACTGCACATGCGCACCACAGAACCAGAAATGTGATCCACCTCTCGCCGGA
TGTCTCAGCGTCGCAAACCGTACAGAGTACCAGCATGTTCTTGTGTACGA
CGGTTGGACGACAGCACCTGACACTAACATCACACTGTCGCAGTGCACAC
TGGCCGGAAGATGGGAGGCATTGTCGGGGGGCATACCGGTTCAAAGGTAT
GAGTGGAGTGCAGGACAGGAGGGTAAGGCGGCAGGTACCGGGGTGTTTGA
TCTAACTAACGACAGGATTTGGTACGACGTCGGACTGAGAACTTCAGCCG
TTTTGAGCCTCAGGCGGGATAGACCACAATTAAAACCACACGTCAGATAC
GTGTTCCACGTGCGAGCCTGGTACAGCAGTGACGTCTATCTGGACTTCCA
CTCAGACGGCGTCATCACAGACTTCACACCTCCAACTGTGAAAGCAGGCT
TGTATGTTGAGAGAACGTCCAACGGCTTCTATATTGATGAGACCCCTCCA
GTGATGCTGAAAGAACCACAGTTTGATCTGACACAGGGAACAATTGTTCC
TGACACTCAGGTATGGAGAACAGCCTTGTCTCTGAAGTGGGAGTTCGTTG
ACCCCGAGAGTTCAATCGAGCGGCAGCACCTGTCAGTCTTCACTCACCAC
CAGGCAGGGATTGATATAGAACCTTTTGAGATAGCCGGTTCCGTCCGAGA
CTATTGCTTCACTAACTTGTCGTTGCATGACGGAGACACCTACTACGTAC
GGGTGGTGGCCTGTAACGGCGCTAAGCTGTGTACATCAGGGGAGACGAGT
GGGGTTCTGGTGGACTCCACCCCTCCCACAGTGGGGATGTTGGCCATACA
GACCGACCATGCTGCCCAGCTATGGCGCCATCGTGACGGTTGGATGACGT
ATTATCAACAGAACGTCACTTCCCCTCCTCACGTCCGACTGGCCTGGCTC
GGCTTCACAGACATGCACACTGGGATCCACAACTATCACGTGACTATCGG
ATCCACGTTTGGTGGCACAGACCTCACGCGAGACTGCATCGTCCTCCCAC
ACCAGGTCGGTCCGTCCCACGAAGACGAAGGCGCAGTACAAGTCTCTGTA
GTGAACATCACACGGAACCTGGCTGACAGGGAGCACATTTATGTCACACT
TTGGGCAGTTAACAAGGTCGGATTACAGAGCGTCGTGGCCCATGCTGCTC
TGGAAGCGGTCCCCTCAAACCCGCACAGTGGCCTCCTGTCATTGGTCAGA
CGGTGTGACGTACATTCATGTGAGGGGCACTGCACATGCGCACCACAGAA
CCAGAAATGTGATCCACCTCTCGCCGGATGTCTCAGCGTCGCAAACCGTA
CAGAGTACCAGCATGTTCTTGTGTACGACGGTTGGACGACAGCACCTGAC
ACTAACATCACACTGTCGCAGTGCACACTGGCCGGAAGATGGGAGGCATT
GTCGGGGGGCATACCGGTTCAAAGGTATGAGTGGAGTGCAGGACAGGAGG
GTAAGGCGGCAGGTACCGGGGTGTTTGATCTAACTAACGACAGGATTTGG
TACGACGTCGGACTGAGAACTTCAGCCGTTTTGAGCCTCAGGCGGGATAG
ACCACAATTAAAACCACACGTCAGATACGTGTTCCACGTGCGAGCCTGGT
ACAGCAGTGACGTCTATCTGGACTTCCACTCAGACGGCGTCATCACAGAC
TTCACACCTCCAACTGTGAAAGCAGGCTTGTATGTTGAGAGAACGTCCAA
CGGCTTCTATATTGATGAGACCCCTCCAGTGATGCTGAAAGAACCACAGT
TTGATCTGACACAGGGAACAATTGTTCCTGACACTCAGGTATGGAGAACA
GCCTTGTCTCTGAAGTGGGAGTTCGTTGACCCCGAGAGTTCAATCGAGCG
GCAGCACCTGTCAGTCTTCACTCACCACCAGGCAGGGATTGATATAGAAC
CTTTTGAGATAGCCGGTTCCGTCCGAGACTATTGCTTCACTAACTTGTCG
TTGCATGACGGAGACACCTACTACGTACGGGTGGTGGCCTGTAACGGCGC
TAAGCTGTGTACATCAGGGGAGACGAGTGGGGTTCTGGTGGACTCCACCC
CTCCCACAGTGGGGATGTTGGCCATACAGACCGACCATGCTGCCCAGCTA
TGGCGCCATCGTGACGGTTGGATGACGTATTATCAACAGAACGTCACTTC
CCCTCCTCACGTCCGACTGGCCTGGCTCGGCTTCACAGACATGCACACTG
GGATCCACAACTATCACGTGACTATCGGATCCACGTTTGGTGGCACAGAC
CTCACGCGAGACTGCATCGTCCTCCCACACCAGGTCGGTCCGTCCCACGA
AGACGAAGGCGCAGTACAAGTCTCTGTAGTGAACATCACACGGAACCTGG
CTGACAGGGAGCACATTTATGTCACACTTTGGGCAGTTAACAAGGTCGGA
TTACAGAGCGTCGTGGCCCATGCTGCTCTGGAAGCGGTCCCCTCAAACCC
GCACAGTGGCCTCCTGTCATTGGTCAGACGGTGTGACGTACATTCATGTG
AGGGGCACTGCACATGCGCACCACAGAACCAGAAATGTGATCCACCTCTC
GCCGGATGTCTCAGCGTCGCAAACCGTACAGAGTACCAGCATGTTCTTGT
GTACGACGGTTGGACGACAGCACCTGACACTAACATCACACTGTCGCAGT
GCACACTGGCCGGAAGATGGGAGGCATTGTCGGGGGGCATACCGGTTCAA
AGGTATGAGTGGAGTGCAGGACAGGAGGGTAAGGCGGCAGGTACCGGGGT
GTTTGATCTAACTAACGACAGGATTTGGTACGACGTCGGACTGAGAACTT
CAGCCGTTTTGAGCCTCAGGCGGGATAGACCACAATTAAAACCACACGTC
AGATACGTGTTCCACGTGCGAGCCTGGTACAGCAGTGACGTCTATCTGGA
CTTCCACTCAGACGGCGTCATCACAGACTTCACACCTCCAACTGTGAAAG
CAGGCTTGTATGTTGAGAGAACGTCCAACGGCTTCTATATTGATGAGACC
CCTCCAGTGATGCTGAAAGAACCACAGTTTGATCTGACACAGGGAACAAT
TGTTCCTGACACTCAGGTATGGAGAACAGCCTTGTCTCTGAAGTGGGAGT
TCGTTGACCCCGAGAGTTCAATCGAGCGGCAGCACCTGTCAGTCTTCACT
CACCACCAGGCAGGGATTGATATAGAACCTTTTGAGATAGCCGGTTCCGT
CCGAGACTATTGCTTCACTAACTTGTCGTTGCATGACGGAGACACCTACT
ACGTACGGGTGGTGGCCTGTAACGGCGCTAAGCTGTGTACATCAGGGGAG
ACGAGTGGGGTTCTGGTGGACTCCACCCCTCCCACAGTGGGGATGTTGGC
CATACAGACCGACCATGCTGCCCAGCTATGGCGCCATCGTGACGGTTGGA
TGACGTATTATCAACAGAACGTCACTTCCCCTCCTCACGTCCGACTGGCC
TGGCTCGGCTTCACAGACATGCACACTGGGATCCACAACTATCACGTGAC
TATCGGATCCACGTTTGGTGGCACAGACCTCACGCGAGACTGCATCGTCC
TCCCACACCAGGTCGGTCCGTCCCACGAAGACGAAGGCGCAGTACAAGTC
TCTGTAGTGAACATCACACGGAACCTGGCTGACAGGGAGCACATTTATGT
CACACTTTGGGCAGTTAACAAGGTCGGATTACAGAGCGTCGTGGCCCATG
CTGCTCTGGAAGCGGTCCCCTCAAACCCGCACAGTGGCCTCCTGTCATTG
GTCAGACGGTGTGACGTACATTCATGTGAGGGGCACTGCACATGCGCACC
ACAGAACCAGAAATGTGATCCACCTCTCGCCGGATGTCTCAGCGTCGCAA
ACCGTACAGAGTACCAGCATGTTCTTGTGTACGACGGTTGGACGACAGCA
CCTGACACTAACATCACACTGTCGCAGTGCACACTGGCCGGAAGATGGGA
GGCATTGTCGGGGGGCATACCGGTTCAAAGGTATGAGTGGAGTGCAGGAC
AGGAGGGTAAGGCGGCAGGTACCGGGGTGTTTGATCTAACTAACGACAGG
ATTTGGTACGACGTCGGACTGAGAACTTCAGCCGTTTTGAGCCTCAGGCG
GGATAGACCACAATTAAAACCACACGTCAGATACGTGTTCCACGTGCGAG
CCTGGTACAGCAGTGACGTCTATCTGGACTTCCACTCAGACGGCGTCATC
ACAGACTTCACACCTCCAACTGTGAAAGCAGGCTTGTATGTTGAGAGAAC
GTCCAACGGCTTCTATATTGATGAGACCCCTCCAGTGATGCTGAAAGAAC
CACAGTTTGATCTGACACAGGGAACAATTGTTCCTGACACTCAGGTATGG
AGAACAGCCTTGTCTCTGAAGTGGGAGTTCGTTGACCCCGAGAGTTCAAT
CGAGCGGCAGCACCTGTCAGTCTTCACTCACCACCAGGCAGGGATTGATA
TAGAACCTTTTGAGATAGCCGGTTCCGTCCGAGACTATTGCTTCACTAAC
TTGTCGTTGCATGACGGAGACACCTACTACGTACGGGTGGTGGCCTGTAA
CGGCGCTAAGCTGTGTACATCAGGGGAGACGAGTGGGGTTCTGGTGGACT
CCACCCCTCCCACAGTGGGGATGTTGGCCATACAGACCGACCATGCTGCC
CAGCTATGGCGCCATCGTGACGGTTGGATGACGTATTATCAACAGAACGT
CACTTCCCCTCCTCACGTCCGACTGGCCTGGCTCGGCTTCACAGACATGC
ACACTGGGATCCACAACTATCACGTGACTATCGGATCCACGTTTGGTGGC
ACAGACCTCACGCGAGACTGCATCGTCCTCCCACACCAGGTCGGTCCGTC
CCACGAAGACGAAGGCGCAGTACAAGTCTCTGTAGTGAACATCACACGGA
ACCTGGCTGACAGGGAGCACATTTATGTCACACTTTGGGCAGTTAACAAG
GTCGGATTACAGAGCGTCGTGGCCCATGCTGCTCTGGAAGCGGTCCCCTC
AAACCCGCACAGTGGCCTCCTGTCATTGGTCAGACGGTGTGACGTACATT
CATGTGAGGGGCACTGCACATGCGCACCACAGAACCAGAAATGTGATCCA
CCTCTCGCCGGATGTCTCAGCGTCGCAAACCGTACAGAGTACCAGCATGT
TCTTGTGTACGACGGTTGGACGACAGCACCTGACACTAACATCACACTGT
CGCAGTGCACACTGGCCGGAAGATGGGAGGCATTGTCGGGGGGCATACCG
GTTCAAAGGTATGAGTGGAGTGCAGGACAGGAGGGTAAGGCGGCAGGTAC
CGGGGTGTTTGATCTAACTAACGACAGGATTTGGTACGACGTCGGACTGA
GAACTTCAGCCGTTTTGAGCCTCAGGCGGGATAGACCACAATTAAAACCA
CACGTCAGATACGTGTTCCACGTGCGAGCCTGGTACAGCAGTGACGTCTA
TCTGGACTTCCACTCAGACGGCGTCATCACAGACTTCACACCTCCAACTG
TGAAAGCAGGCTTGTATGTTGAGAGAACGTCCAACGGCTTCTATATTGAT
GAGACCCCTCCAGTGATGCTGAAAGAACCACAGTTTGATCTGACACAGGG
AACAATTGTTCCTGACACTCAGGTATGGAGAACAGCCTTGTCTCTGAAGT
GGGAGTTCGTTGACCCCGAGAGTTCAATCGAGCGGCAGCACCTGTCAGTC
TTCACTCACCACCAGGCAGGGATTGATATAGAACCTTTTGAGATAGCCGG
TTCCGTCCGAGACTATTGCTTCACTAACTTGTCGTTGCATGACGGAGACA
CCTACTACGTACGGGTGGTGGCCTGTAACGGCGCTAAGCTGTGTACATCA
GGGGAGACGAGTGGGGTTCTGGTGGACTCCACCCCTCCCACAGTGGGGAT
GTTGGCCATACAGACCGACCATGCTGCCCAGCTATGGCGCCATCGTGACG
GTTGGATGACGTATTATCAACAGAACGTCACTTCCCCTCCTCACGTCCGA
CTGGCCTGGCTCGGCTTCACAGACATGCACACTGGGATCCACAACTATCA
CGTGACTATCGGATCCACGTTTGGTGGCACAGACCTCACGCGAGACTGCA
TCGTCCTCCCACACCAGGTCGGTCCGTCCCACGAAGACGAAGGCGCAGTA
CAAGTCTCTGTAGTGAACATCACACGGAACCTGGCTGACAGGGAGCACAT
TTATGTCACACTTTGGGCAGTTAACAAGGTCGGATTACAGAGCGTCGTGG
CCCATGCTGCTCTGGAAGCGGTCCCCTCAAACCCGCACAGTGGCCTCCTG
TCATTGGTCAGACGGTGTGACGTACATTCATGTGAGGGGCACTGCACATG
CGCACCACAGAACCAGAAATGTGATCCACCTCTCGCCGGATGTCTCAGCG
TCGCAAACCGTACAGAGTACCAGCATGTTCTTGTGTACGACGGTTGGACG
ACAGCACCTGACACTAACATCACACTGTCGCAGTGCACACTGGCCGGAAG
ATGGGAGGCATTGTCGGGGGGCATACCGGTTCAAAGGTATGAGTGGAGTG
CAGGACAGGAGGGTAAGGCGGCAGGTACCGGGGTGTTTGATCTAACTAAC
GACAGGATTTGGTACGACGTCGGACTGAGAACTTCAGCCGTTTTGAGCCT
CAGGCGGGATAGACCACAATTAAAACCACACGTCAGATACGTGTTCCACG
TGCGAGCCTGGTACAGCAGTGACGTCTATCTGGACTTCCACTCAGACGGC
GTCATCACAGACTTCACACCTCCAACTGTG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL96478gene:BL96478Branchiostoma lanceolatumgene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL96478_cuf2transcript:BL96478_cuf2-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL96478_cuf2-E1BL96478_cuf2-E1-1564476830-551810Branchiostoma lanceolatumexon
BL96478_cuf2-E2BL96478_cuf2-E2-1564476830-551812Branchiostoma lanceolatumexon
BL96478_cuf2-E3BL96478_cuf2-E3-1564476830-551814Branchiostoma lanceolatumexon
BL96478_cuf2-E4BL96478_cuf2-E4-1564476830-551816Branchiostoma lanceolatumexon
BL96478_cuf2-E5BL96478_cuf2-E5-1564476830-551818Branchiostoma lanceolatumexon
BL96478_cuf2-E6BL96478_cuf2-E6-1564476830-551820Branchiostoma lanceolatumexon
BL96478_cuf2-E7BL96478_cuf2-E7-1564476830-551822Branchiostoma lanceolatumexon
BL96478_cuf2-E8BL96478_cuf2-E8-1564476830-551824Branchiostoma lanceolatumexon
BL96478_cuf2-E9BL96478_cuf2-E9-1564476830-551826Branchiostoma lanceolatumexon
BL96478_cuf2-E10BL96478_cuf2-E10-1564476830-551829Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
xpSc0039678genomexpSc0039678:160519..167242 +
Properties
Property NameValue
Transcript idBL96478_cuf2
Biotypeprotein_coding