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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96363_cuf13 >transcript:BL96363_cuf13-protein ID=transcript:BL96363_cuf13-protein|Name=transcript:BL96363_cuf13|organism=Branchiostoma lanceolatum|type=polypeptide|length=196bp
MFVIYKFVLATTLTAAQASSVRTPTVLTTQVTTGTARVSEQSRGTGVTGT
TSVTGRSTAGAMSSTQSPSTAASSTTTGAVTPSMAAAPTTTTTAPITTTA
VPSTTTRAVTPSMTTTTNPTGSPGTGTVRTTPTLVTRLVTTVNATESLPK
PPGTDIVTIVAGVLGGVACVLVIAGAIGAVVKCMAAKTAVVAVKPA Run BLAST on NCBI mRNA from alignment at Sc0000351:46899..51730+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96363_cuf13 ID=transcript:BL96363_cuf13|Name=transcript:BL96363_cuf13|organism=Branchiostoma lanceolatum|type=mRNA|length=4832bp|location=Sequence derived from alignment at Sc0000351:46899..51730+ (Branchiostoma lanceolatum)
CCTACTGTAAACAGCCCGACGCTGGGGCAGACGCCTGCTGTTAGCACATC
AACACTGGGGCAGACGCTTACAGCAAGCACCCCGATGGTTCTGACTTCAA
GAGCGACAACAAGGAAGGCCAGCACTGCAACACAGTCAACAGGTTATAGT
ATTGGTTTTACAGCTTGTATCTGCACTGGACTCTGGTACACAGCACTGTA
AACTTGCACTTAAACTTGTTGGTAACATCCATTTAACTCAAATGTGCACA
TTTAAAAAGCTTCACTGGTCAACAAATCAAGCATCCAATAAAACAGCAAT
AAAGTATTTGGCCAAGTTACATGTATCAACCAAATGAGTCACCAACCAAC
CAACCAACCCATCCACCCACACATCAACAACCAAGTAATCAACCAAACAA
CTCACCAATCAAGCAAGCATTCAACTCTTCACACATACAACATGTCAGAA
GATCTGTCCCATCAAGGAGGATTAAACCTCCTTGGTCCCATGGTACAATG
TAGATTCAACACCACAGCCTGGAAAAGTTGCCTCATAGCCTGTATTTAAC
ATGTTTGTTATATATAAATTTGTGTTAGCTACAACACTGACTGCTGCACA
GGCCTCCTCTGTAAGGACACCTACAGTTCTGACTACACAGGTGACGACTG
GTACAGCAAGGGTCTCGGAGCAATCAAGAGGTTTCATTCCAAACAAACTT
TTGCTTTTATTGATTGCAACGGATCCAGAACCTGCATGGGTGGCACTGCT
TGTAGTCTGGCAGGCTATATCCGGCGCCAGGATTAGGTCCACAGCTTATG
TAGTACAGCATTCACACTGACAATTGACCTGATGTTTTTGCCAACGTCAG
CCAACATGCGCATGATTGGACGACTAATCTAATGGTAGCAGCAGATCATT
TACGAATGAAAGTTTCTCATGGTGTTATGCTGCACAGCCACGGCAGGACA
GGCATTTTGCATCCTCAGTCATACTCATTAGAGAGTGTTTATTCAAATTT
TGGACAGGTACAGGTGTAACTGGAACTACATCAGTGACTGGACGCTCAAC
TGCAGGTGCCATGTCCAGCACACAATCACCATCAACTGCTGCGTCATCAA
CTACAACCGGAGCTGTTACTCCTTCAATGGCTGCAGCTCCAACAACTACA
ACTACCGCGCCAATAACTACAACTGCTGTGCCTTCAACTACAACCCGAGC
TGTTACACCTTCAATGACGACTACCACAAATCCGACAGGTTGGAACTAGG
CTGCTGTGCTGTTATCATGGCAATATTTTTTGCCAAATGGAGCCATAAAG
AGCATCGTGCCTGTCAAATACTTGCTACGGTGTCCTGTGTCCCACATCTG
CAGAGGCATGCTATGCTGTGCACCCCTTTTCAGTGCAATCAATGCTAGGT
CACGCTGCAAAGGCTGCATGATGTGCTTGTATGTTAGAGCATGTGTGAAT
GTACCGTAGCTGCAGAAGTGCATATATTTTGTCTATTTTAATACCGCCAT
ACCCTCTCAATGGTGTGTCTACAGATTGTTTAAGAATGTTGAGGCTGCTA
GAAAATATATGACCCATTAAACAGTGGTTTTTATGGCAGCTAGGTGATGC
ATGTCATGGGCCTGATCAACAGTTGCTACCTGCATATCCTATTTCCTCGT
ATATTGTAGCCTAGTCAAACATATTCATCGCTTTCACAATGCCTGTTGCA
ATACACTAGACATTTTTCAAGGTGGCCTTTGCGATGCATGCAGTTTCTTT
TGATCTCCATCAACCAGGGTTCAATGTGAGCTGGCAGAAAACAGAATGAT
ACTTCATACTACGCTTTGTTCAAGTGATAACGTGCATGTATTTAATAACT
AGTAGCATGTTGAGGCCCGAATTTTGGTCTATGATTAAGGTGATACACAC
TGGGATACGTCTAATAGCATCTGACAATAAAACAGAAAACTTAGTAAGCA
CTAACCTTACCTAGTTTTGAATTTTTCTCCAAAGGGTGACTGGACAACTA
CCACTCAAATCATTTAACCATTATGCTAAACACCTGAATGTGACATGGCG
GTACACTTCTCTCCTCAGGTTCACCTGGCACTGGAACTGTCCGGACCACA
CCTACCCTGGTCACCAGACTCGTCACCACTGTCAATGCTACAGAGAGTCT
TCCAAGTCAGTAAAACACTAAGTTTTCAAACAGTTAAACTTTGGTGTCTG
GTTCACGCATACAACATTCTTTCTTAAATTTAGCACTGTAAATGCAGAAA
TGTTCGTGGTAGTTTTATGTTCACGGTTTCTGCAGTAAGGTCTTCGCCAC
GAACATAAAACCACCGCAAAATTTTTTGCCCTCCTACCTACTTGTCTTGT
AGTAATATTGTCTCAAACGCGAACTTAAAACCACCGCGAACACTCCATTT
TCTCCGACGAAATTAAAACTAAGTGAACTTAAGTGCATTTACAGTAATAG
ACCTGATGATGTGACCAACAGTAAAACTGTCCAGCTCATCCCTTTGTGGA
TACTTCCATACCTGACCTTTTATCTCCTTGTACCTATCATCATCATCATA
ACAGTAACTGTTGATTATGAATTTACCTAGATCTCCAATATCTAAAAGAA
AAAGTACATTTGTCTCATTTCTAAATAATGATGTCCACAATAAACAGGAT
ATTTTGATTACAATGGCAGTGGAATGAAGCTGACGTGAAAAATGTTGGTC
TCCTTCCACAGAACCACCAGGAACTGACATAGTCACCATAGTGGCAGGCG
TGCTGGGTGGCGTGGCGTGTGTGCTGGTGATCGCCGGCGCAATAGGGGCT
GTCGTAAAGTGTATGGCAGCAAAGACCGCTGTGGTTGCCGTCAAACCTGC
CTGAAACTACTGTACTTCATTAAGAGTACATCACCTTGGAAGAAAGGGGG
ATCCAATTCTTACTTCTGTCTGAATAATATCTATTTCATTTCTTTTGCTT
GTTTTTGGCCCTTTGTTGCTTTCTTTATGCCTTCAATTTGGTTCTTTTCT
ATTCATTCGTAAGGCTAATTTCTCTTATATCTGGACTTTCCTTATTATTG
TTGTCTACTGCTATTCCCATATATTGTCTATCCTTTGGATTGCAATTTCC
GACTTCTTCCCGCTTGATCATTGTCATATGTTAAGAATGATGGTCCATTC
AAGACTTATTTGCCTGTCTCTCCTTTCTTGTGTGAAGTCCTTCATGTCAT
AACTGAATGCCTTGTGCATTTATCAGAAGCCAACTCTGAACTCTGTCTTT
GTTAAACCATCCAATATCAGAGCTGGGACTTGGCACTTGCAGGGTTAAAA
AGTCTTAGTCTTTCTCACACCTCTTTCTCAAACCTCTGCTAACAAGTCTG
CGGTGCAATCTTTGGTGCCATTTCAAATCACAAGTTGCCTTATTAGGAGC
TATTTTTCTACTGAGAGATCCCCACATCAGCTGCTAATTTCATGGATGTA
CATGTATAAGATTGAAAGACCAAAAAAATACTTTTTTCATTATTAAATAT
CCTGTGGGGCATGTAAACCAATTACAACAAAATATTTTCTTATCATTCAA
TCAGCAAAATATAGAAATAAAAGAAAACTTGAAAAGGAAGTTAACAGTTG
TATTTTATGCCCCAAATCTTTTGCTTTGAACTTGAAACCCTTGTTACTTG
TACTACAATGACGCCACATCTTGCCCACTAGTCTTCATAATAGTACATGT
GTGACTGAGTTATATAACTCCTTACAATGGCATCAACATAGGTCAGTTCT
GTAAATAAGGCAATGCAGTATTTGATGATAATATTTATAATAATAACTTA
TGTAAGTGGGTAATTTCTTTTTCATTAACAGAGATTTTGTATTATCTTAA
CTAACCTAATCCATGGAAAGGTGATTTGAATGAGAGAACTGAACTGGGAA
AGAAAGGAATATGTAACATAAGCGTTCACCTAGAATGCTCACTGAAATTC
CTTTACATTTCAATTTTAGAAATTTGTAGGTAATATGAAATCATTGTATA
TTTCTTTTGTGGTATTTATGTCATATTTAGCCCGTGAGATTTAGGAAAAA
ATATCACCATATCACATGAGTGTTAAAAGATTTAGCTTATTTCTTTGACA
GACTATTTACATGTTTAGAATGCAAAGATCACGTAAATTATCCTGGCAAT
GCTGCATGTACATAATTATATATTATACTTCTGTGGTGATGGACCTACAC
TTGGTAAAAGTTGTTATGTCACAGAATTTGTCTTCTAATATATATAACAC
AAAAATGACTGCACATTTCCAATGTGGATTTCTTTGCACTACTGTATTGT
ATGTTGTTGAAAACAGAATCATGGTATTAAAGGACTTAAAAAAAATTTTA
TCATTAGATTTAAAGGTCACATTCTGAGTTGCTTTATTGCCACATTGCTG
ATTTAGTCTGAAGGCCTTACATAATCAATTATTTGGTTCCGTGGTTGTCA
GCAAAAAAAACAAGGAGGGGTACACAATGTATAAACTACATGTATGTATT
GAGCCTCCAAATACATGTAGTATATTGGTTTGAAGATTATAAAAATTGAT
ATTGTGGTTAGTACACATGTACTATTTTTTGACAATGAAAAGTTATGGGA
AAAACGTTTGGGAACCGAGTAGTTGCTTTGGTATGGCCTGTGTCAAATAC
CCTTGTGGAAATCATGTTATCAAAAGAAGTCTAACTCGGAGTAATACTTG
GGAGTTTGATCAATGGTGAATGTGCAATAAGATAATCATGTGGAGGGCTT
GCTGCTATTGAATGTTTATTGATTACTAACATTTAAATGTATTTGTTTGC
ATTTATCATATTACAACTATCTTCAAAAACAT Coding sequence (CDS) from alignment at Sc0000351:46899..51730+ >transcript:BL96363_cuf13 ID=transcript:BL96363_cuf13|Name=transcript:BL96363_cuf13|organism=Branchiostoma lanceolatum|type=CDS|length=2364bp|location=Sequence derived from alignment at Sc0000351:46899..51730+ (Branchiostoma lanceolatum)
ATGTTTGTTATATATAAATTTGTGTTAGCTACAACACTGACTGCTGCACA
GGCCTCCTCTGTAAGGACACCTACAGTTCTGACTACACAGGTGACGACTG
GTACAGCAAGGGTCTCGGAGCAATCAAGAGGTACAGGTGTAACTGGAACT
ACATCAGTGACTGGACGCTCAACTGCAGGTGCCATGTCCAGCACACAATC
ACCATCAACTGCTGCGTCATCAACTACAACCGGAGCTGTTACTCCTTCAA
TGGCTGCAGCTCCAACAACTACAACTACCGCGCCAATAACTACAACTGCT
GTGCCTTCAACTACAACCCGAGCTGTTACACCTTCAATGACGACTACCAC
AAATCCGACAGGTTCACCTGGCACTGGAACTGTCCGGACCACACCTACCC
TGGTCACCAGACTCGTCACCACTGTCAATGCTACAGAGAGTCTTCCAAAA
CCACCAGGAACTGACATAGTCACCATAGTGGCAGGCGTGCTGGGTGGCGT
GGCGTGTGTGCTGGTGATCGCCGGCGCAATAGGGGCTGTCGTAAAGTGTA
TGGCAGCAAAGACCGCTGTGGTTGCCGTCAAACCTGCCTGAATGTTTGTT
ATATATAAATTTGTGTTAGCTACAACACTGACTGCTGCACAGGCCTCCTC
TGTAAGGACACCTACAGTTCTGACTACACAGGTGACGACTGGTACAGCAA
GGGTCTCGGAGCAATCAAGAGGTACAGGTGTAACTGGAACTACATCAGTG
ACTGGACGCTCAACTGCAGGTGCCATGTCCAGCACACAATCACCATCAAC
TGCTGCGTCATCAACTACAACCGGAGCTGTTACTCCTTCAATGGCTGCAG
CTCCAACAACTACAACTACCGCGCCAATAACTACAACTGCTGTGCCTTCA
ACTACAACCCGAGCTGTTACACCTTCAATGACGACTACCACAAATCCGAC
AGGTTCACCTGGCACTGGAACTGTCCGGACCACACCTACCCTGGTCACCA
GACTCGTCACCACTGTCAATGCTACAGAGAGTCTTCCAAAACCACCAGGA
ACTGACATAGTCACCATAGTGGCAGGCGTGCTGGGTGGCGTGGCGTGTGT
GCTGGTGATCGCCGGCGCAATAGGGGCTGTCGTAAAGTGTATGGCAGCAA
AGACCGCTGTGGTTGCCGTCAAACCTGCCTGAATGTTTGTTATATATAAA
TTTGTGTTAGCTACAACACTGACTGCTGCACAGGCCTCCTCTGTAAGGAC
ACCTACAGTTCTGACTACACAGGTGACGACTGGTACAGCAAGGGTCTCGG
AGCAATCAAGAGGTACAGGTGTAACTGGAACTACATCAGTGACTGGACGC
TCAACTGCAGGTGCCATGTCCAGCACACAATCACCATCAACTGCTGCGTC
ATCAACTACAACCGGAGCTGTTACTCCTTCAATGGCTGCAGCTCCAACAA
CTACAACTACCGCGCCAATAACTACAACTGCTGTGCCTTCAACTACAACC
CGAGCTGTTACACCTTCAATGACGACTACCACAAATCCGACAGGTTCACC
TGGCACTGGAACTGTCCGGACCACACCTACCCTGGTCACCAGACTCGTCA
CCACTGTCAATGCTACAGAGAGTCTTCCAAAACCACCAGGAACTGACATA
GTCACCATAGTGGCAGGCGTGCTGGGTGGCGTGGCGTGTGTGCTGGTGAT
CGCCGGCGCAATAGGGGCTGTCGTAAAGTGTATGGCAGCAAAGACCGCTG
TGGTTGCCGTCAAACCTGCCTGAATGTTTGTTATATATAAATTTGTGTTA
GCTACAACACTGACTGCTGCACAGGCCTCCTCTGTAAGGACACCTACAGT
TCTGACTACACAGGTGACGACTGGTACAGCAAGGGTCTCGGAGCAATCAA
GAGGTACAGGTGTAACTGGAACTACATCAGTGACTGGACGCTCAACTGCA
GGTGCCATGTCCAGCACACAATCACCATCAACTGCTGCGTCATCAACTAC
AACCGGAGCTGTTACTCCTTCAATGGCTGCAGCTCCAACAACTACAACTA
CCGCGCCAATAACTACAACTGCTGTGCCTTCAACTACAACCCGAGCTGTT
ACACCTTCAATGACGACTACCACAAATCCGACAGGTTCACCTGGCACTGG
AACTGTCCGGACCACACCTACCCTGGTCACCAGACTCGTCACCACTGTCA
ATGCTACAGAGAGTCTTCCAAAACCACCAGGAACTGACATAGTCACCATA
GTGGCAGGCGTGCTGGGTGGCGTGGCGTGTGTGCTGGTGATCGCCGGCGC
AATAGGGGCTGTCGTAAAGTGTATGGCAGCAAAGACCGCTGTGGTTGCCG
TCAAACCTGCCTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000351 | genome | Sc0000351:46899..51730 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96363_cuf13 |
| Biotype | protein_coding |
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