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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96301_cuf4 >transcript:BL96301_cuf4-protein ID=transcript:BL96301_cuf4-protein|Name=transcript:BL96301_cuf4|organism=Branchiostoma lanceolatum|type=polypeptide|length=201bp
KTCQRWDSQTPHEHGYTTANYPSSGLEENYCRNTGDWTGVWCYTTDNDTR
WELCDVPACGTVCPELPVPSNGNRTEGHLYGDIVTFSCDEGYDLTGSVNR
TCQTNQSWSGIQPNCSRTSCSQLTPVQHGGTSGGSYYGDVVTYHCDPGYE
ISGVEERTCQSDQTWSGTQPTCXVAMKNEHASRTRRGAAHSRHATEKPVQ
S Run BLAST on NCBI mRNA from alignment at Sc0000037:390196..395132+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96301_cuf4 ID=transcript:BL96301_cuf4|Name=transcript:BL96301_cuf4|organism=Branchiostoma lanceolatum|type=mRNA|length=4937bp|location=Sequence derived from alignment at Sc0000037:390196..395132+ (Branchiostoma lanceolatum)
AAGACATGTCAACGCTGGGACAGTCAGACACCCCATGAACACGGTTATAC
GACTGCTAATTATCCTTCATCCGGACTAGAGGAGAACTACTGCCGGAATA
CTGGCGACTGGACCGGAGTTTGGTGCTACACCACGGATAATGACACGAGA
TGGGAACTGTGTGACGTACCAGCATGTGGTAAGGTCTGATTTGTTAACCT
TAGATAACAGCAGATACTTTCCTTTCATCCATATCCACTACTATATCTGC
TCATCAACATTGCAATGTTATCATACACTCACTCACTCACTCACTCACTC
GCTCACGCACTTACTTATCATACACTCATTCACTCATTCACTCATTCACT
CACTCACTCACATACACACCCGTCGATAATGTTTGATGAATAATTAACGA
TAAATAAGAGCAAATAAAACTTGACGAGTAGCGTACAGTTTAGTGCGATA
TGCCATGTCTGTTCATTGTATAACGCTACATGTTACGATTACAATACCGC
GGACGTATTCACGTTGATCACCGTATAGTGGATTGACGTTATCTTAACAT
GACAAAATGATGTAACTTCTCTGCCATAAGAACAACAGTTTAACGTGACA
GAACGATCTACTTATTGATTGGCTCTAAACTATTTAGTCTTAGGAACCGT
CTGTCCAGAGCTACCAGTCCCAAGCAATGGTAATAGAACTGAGGGTCATC
TTTACGGAGACATAGTTACCTTTTCCTGTGATGAGGGTTACGACCTGACT
GGCTCTGTAAACAGAACTTGCCAGACCAACCAGAGCTGGTCGGGTATACA
GCCCAATTGCTCCAGTAAGTAACTATGTTCCGCTTTATAGTTTTGTTGTC
ATGGTCGTAAGTGCTTTTTAAGAATTTGCCAATTATGGCTATGTTTCATC
AAGTCGTCAGCTTTCTTGATGATAAAGTATTGCAATGGTTCACTGAAAAC
TGTCATTATACTGCACTATTTTGTGTGGCGTCTTTGAGTCAGTGTAGCAT
AGCTATGACAGGTAGCTTCTCTAACTGACTTTTTTTTGCTACTATGTATA
AATAGGAACAGTCTGCCCAGAGTTACCATTTCCATCCAACGGCAGCAGAA
CCGAGAGTTATCTTTACGGAGACATAGTTACCTTTACCTGTAATGAGGGC
TTCTATCTGATCGGTTCTGTAAACAGATCTTGCCAGGCCGACCAGAGCTG
GTCGGGCATACAGCCCAATTGCTCCAGTACGTAATTTCTTACATTTGACC
TCTTAGCATGGTTTTCGTAGAAGTAGATCTTTAAATCCTTTTTTATAGGT
TTATAGGTTCTTTTTTGTTTTTTTAGTTTCGAATATCGTTTTGCTGTTGT
CAAAGTTTTGACGCCAAATATCGTATGTTCCAGGAACGTCCTGCTCACAG
CTGACGCCTGTCCAACATGGCGGCACCAGCGGTGGCAGTTATTATGGGGA
CGTCGTCACTTATCACTGTGACCCTGGATACGAGATCAGTGGTGTTGAAG
AACGGACCTGCCAGTCGGACCAGACGTGGAGCGGCACACAGCCGACATGC
ANAGTGGCGATGAAAAACGAACATGCCAGTCGGACCAGACGTGGAGCGGC
ACACAGCCGACATGCAACCGTAGGTGGCTTCCCTGTTTCCCTTGGTTGTG
TTTCGTCACGTTTGATTTTTTCTGACGTAATGTATTTCAAAATCTCCGTG
ACCGACTGCTATAATTGTAAAGTACGTACTTTGATTATGCTTTGAGCCTA
TAGAGCATAGTAATTACCCGTAGCCTTTCCCAGTAACTAACGGCAATGTC
GATGTTACGCTTTTCACACAGGGAAAGCGTGTCCAGAGCTACCAGTCCCA
AACAATGGCAGCAGAACCGCGGGTCATCTTTACGGAGACATAGTCACCTT
TACCTGTGCTGATGGTTACGAGCTGATAGGATCTGAAAACAGAACTTGTC
AGGCCGACCAGAGCTGGTCGGGCATACAGCCCAATTGCTCCAGTATGTAT
TAACATTCGGTCTTGTACTATTTCTGTGGTAGTAGTCGATTCTTTGTAAT
ATTTTGTTCTTTTCTTTTTAATAAGGTAAACAGTACAGGCTGGTTTGTGT
TCCTTTAGTTTCGAATATCGTTTTGCTGTTGTCAAAGTTGTGACACCAAA
AATTTTATGTTGCAGGAACGCCCTGCCCGCAGCTGACGCCTGTCCAACAT
GGCGGCACCAGCGGTGGCAGTTATTATGGGGACGTCGTCACTTATCACTG
TGACCCTGGATACGAGATCAGTGGTGATGAAGAACGAACATGCCTGTCGG
ACCAGACGTGGAGCGGCACACAGCCGGCATGCAGCCGTAGGTGTCTTTCT
TGTTGCCATGATTTCTGTTTCGCCGAGTTTTCAGATTGTTCCAAAGTTAA
GTATTTCAAAAGTTTCGTAACAGACTACTGTACATGCAATTACTTTCCTG
CATTTTGTCGTTGTGCCTTTAGTGCATAGTAGTTGCGCAGAGTCGTCCCT
AGTAACTAATGCCGATGTTACCCTTTCTCACAGGAAAGGCCTGTCTAGAG
CTACCAGTCCCAAACAATGGCAGCAGAACCGAGGGTCATCTTTACGGAGA
CATAGTCACCCTTACCTGTAATGAGGGCTACGAACTGATTGGTTCTGTAA
ACAGAACTTGCCAGGCCAACCAGATCTGGTCGGGCATACAGCCCAATTGC
TCCAGTACGTAATTATCAACATTCGACCTTTTAGCACGGTTGTCGTAGTA
GTCGATCTTTTAATTTTTATTTTCAAAGGTTAACAATATGTATCTTTTAG
GCTGCATTTTGTTCGTTTAGTTTTTAATTCTTTTTTGTTCCTGTTGTCAA
AGTTTTGACACCAAATATCTTATGTTCCAGGAACGCCCTGCCCACAGCTG
ACGCCTGTCCAACATGGCGGCACCAGCGGTGGGAGTTATTATGGGGACGT
CGTCACTTATCACTGTGACCCTGGATACGAGATCAGTGGTGTTGAAGAAC
GAACATGCCAGTCGGACCAGACGTGGAGCGGCACACAGCCGACATGCAGC
CGTAGGTGTCTTTCTTGCAAGTGTTTCAAATGATTATGTTTGGACACTAC
TATTTTTATTTCCTCGAGTAGTACAGTAGTTCCGAACCTTCATAAATGGA
TAATGTTTTTGTGCCTCAGTACAATAGAAGCAGCGGTAGAACACAATGGA
CTACTTCTACAATAGAAAGGCATAACGATCTACTATAACTTTGCTTTCAT
ATTTTTCATTAGGAAAAGCCTGTCCAGAGCTACCAGTCCCAAACAACGGC
AGCAGGAATCAGGGTCATCTTTACGGAGACATAGTCACCTTTACCTGTAA
CGAGGGCTACGAATCGATCGGCTCTGTGAACAGAACTTGCCAGGCCAACC
AGAGCTGGTCGGGCACACAGCCCAATTGCTCCAGTACGTAATTATCAACA
TTCGACCTTTTAGCACGGTTGTCGTAGTAGTCGATCTTTTAATTTTTATT
TTCAAAGGTAAACAATATGTATCTTTTAGGCTGCATTTTGTTCGTTTAGT
TTTTAATTCTTTTTTGTTCCTGTTGTCAAAGTTTTGACACCAAATATCTT
ATGTTCCAGGAACGCCCTGCCCACAGCTGACGCCTGTCCAACATGGCGGC
ACCAGCGGTGGGAGTTATTATGGGGACGTCGTCACTTATCACTGTGACCC
TGGATACGAGATCAGTGGTGTTGAAGAACGAACATGCCAGTCGGACCAGA
CGTGGAGCGGCACACAGCCGACATGCAGCCGTAGGTGTCTTTCTTGCAAG
TGTTTCAAATGATTATGTTTGGACACTACTATTTTTATTTCCTCGAGTAG
TACAGTAGTTCCGAACCTTCATAAATGGATAATGTTTTTGTGCCTCAGTA
CAATAGAAGCAGCGGTAGAACACAATGGACTACTTCTACAATAGAAAGGC
ATAACGATCTACTATAACTTTGCTTTCATATTTTTCATTAGGAAAAGCCT
GTCCAGAGCTACCAGTCCCAAACAACGGCAGCAGGAATCAGGGTCATCTT
TACGGAGACATAGTCACCTTTACCTGTAACGAGGGCTACGAATCGATCGG
CTCTGTGAACAGAACTTGCCAGGCCAACCAGAGCTGGTCGGGCACACAGC
CCAATTGCTCCAGTACGTAATTATCAACATTCGACCTTTTAGCACGGTTG
TCGTAGTAGTCGATCTTTTAATTTTTATTTTCAAAGGTTAACAATATGTA
TCTTTTAGGCTGCATTTTGTTCGTTTAGTTTTTAATTCTTTTTTGTTCCT
GTTGTCAAAGTTTTGACACCAAATATCTTATGTTCCAGGAACGCCCTGCC
CACAGCTGACGCCTGTCCAACATGGCGGCACCAGCGGTGGGAGTTATTAT
GGGGACGTCGTCACTTATCACTGTGACCCTGGATACGACATCAGTGGTGT
TGAAGAACGAACATGCCAGTCGGACCAGACGTGGAGCGACACACAGCCGA
CATGCAACCGTAGGTGTCTTCCTTGCGTCAAATAATTATGTTCGGACACT
TCTTTTGTCTATTCCCTCGACAAAGTAGTTCCAAGCCTTCATGACGGACG
CCCTTAAATACTGTTTTTCTGGCTCAGTGCAATACTAAAGCAGCATCAGA
ACACAACTATTACAATAGAAAAGGCATAAAGATCTGCTAGCATATATAAC
TTTGCTTTTATGTTTATCGTTAGGAAAAGCCTGTCCAGAGCTAGCTGTAC
CAAACAACGGCATCAGGACTGAGGGTCATCTTTATGGAGACATAGTCACC
TTTTCCTGTACCGAAGGCTACGAACTGATCGGTTCTGTTAACAGAACTTG
CCAGGCCGACCAGAGCTGGTCGGGTATACAGCCTATATGCGGTGGTCAGT
TGCGTCTTTGGTTTGGTTTTACTTTGTTACATTCTCC Coding sequence (CDS) from alignment at Sc0000037:390196..395132+ >transcript:BL96301_cuf4 ID=transcript:BL96301_cuf4|Name=transcript:BL96301_cuf4|organism=Branchiostoma lanceolatum|type=CDS|length=2424bp|location=Sequence derived from alignment at Sc0000037:390196..395132+ (Branchiostoma lanceolatum)
AAGACATGTCAACGCTGGGACAGTCAGACACCCCATGAACACGGTTATAC
GACTGCTAATTATCCTTCATCCGGACTAGAGGAGAACTACTGCCGGAATA
CTGGCGACTGGACCGGAGTTTGGTGCTACACCACGGATAATGACACGAGA
TGGGAACTGTGTGACGTACCAGCATGTGGAACCGTCTGTCCAGAGCTACC
AGTCCCAAGCAATGGTAATAGAACTGAGGGTCATCTTTACGGAGACATAG
TTACCTTTTCCTGTGATGAGGGTTACGACCTGACTGGCTCTGTAAACAGA
ACTTGCCAGACCAACCAGAGCTGGTCGGGTATACAGCCCAATTGCTCCAG
AACGTCCTGCTCACAGCTGACGCCTGTCCAACATGGCGGCACCAGCGGTG
GCAGTTATTATGGGGACGTCGTCACTTATCACTGTGACCCTGGATACGAG
ATCAGTGGTGTTGAAGAACGGACCTGCCAGTCGGACCAGACGTGGAGCGG
CACACAGCCGACATGCANAGTGGCGATGAAAAACGAACATGCCAGTCGGA
CCAGACGTGGAGCGGCACACAGCCGACATGCAACCGAAAAGCCTGTCCAG
AGCTAGAAGACATGTCAACGCTGGGACAGTCAGACACCCCATGAACACGG
TTATACGACTGCTAATTATCCTTCATCCGGACTAGAGGAGAACTACTGCC
GGAATACTGGCGACTGGACCGGAGTTTGGTGCTACACCACGGATAATGAC
ACGAGATGGGAACTGTGTGACGTACCAGCATGTGGAACCGTCTGTCCAGA
GCTACCAGTCCCAAGCAATGGTAATAGAACTGAGGGTCATCTTTACGGAG
ACATAGTTACCTTTTCCTGTGATGAGGGTTACGACCTGACTGGCTCTGTA
AACAGAACTTGCCAGACCAACCAGAGCTGGTCGGGTATACAGCCCAATTG
CTCCAGAACGTCCTGCTCACAGCTGACGCCTGTCCAACATGGCGGCACCA
GCGGTGGCAGTTATTATGGGGACGTCGTCACTTATCACTGTGACCCTGGA
TACGAGATCAGTGGTGTTGAAGAACGGACCTGCCAGTCGGACCAGACGTG
GAGCGGCACACAGCCGACATGCANAGTGGCGATGAAAAACGAACATGCCA
GTCGGACCAGACGTGGAGCGGCACACAGCCGACATGCAACCGAAAAGCCT
GTCCAGAGCTAGAAGACATGTCAACGCTGGGACAGTCAGACACCCCATGA
ACACGGTTATACGACTGCTAATTATCCTTCATCCGGACTAGAGGAGAACT
ACTGCCGGAATACTGGCGACTGGACCGGAGTTTGGTGCTACACCACGGAT
AATGACACGAGATGGGAACTGTGTGACGTACCAGCATGTGGAACCGTCTG
TCCAGAGCTACCAGTCCCAAGCAATGGTAATAGAACTGAGGGTCATCTTT
ACGGAGACATAGTTACCTTTTCCTGTGATGAGGGTTACGACCTGACTGGC
TCTGTAAACAGAACTTGCCAGACCAACCAGAGCTGGTCGGGTATACAGCC
CAATTGCTCCAGAACGTCCTGCTCACAGCTGACGCCTGTCCAACATGGCG
GCACCAGCGGTGGCAGTTATTATGGGGACGTCGTCACTTATCACTGTGAC
CCTGGATACGAGATCAGTGGTGTTGAAGAACGGACCTGCCAGTCGGACCA
GACGTGGAGCGGCACACAGCCGACATGCANAGTGGCGATGAAAAACGAAC
ATGCCAGTCGGACCAGACGTGGAGCGGCACACAGCCGACATGCAACCGAA
AAGCCTGTCCAGAGCTAGAAGACATGTCAACGCTGGGACAGTCAGACACC
CCATGAACACGGTTATACGACTGCTAATTATCCTTCATCCGGACTAGAGG
AGAACTACTGCCGGAATACTGGCGACTGGACCGGAGTTTGGTGCTACACC
ACGGATAATGACACGAGATGGGAACTGTGTGACGTACCAGCATGTGGAAC
CGTCTGTCCAGAGCTACCAGTCCCAAGCAATGGTAATAGAACTGAGGGTC
ATCTTTACGGAGACATAGTTACCTTTTCCTGTGATGAGGGTTACGACCTG
ACTGGCTCTGTAAACAGAACTTGCCAGACCAACCAGAGCTGGTCGGGTAT
ACAGCCCAATTGCTCCAGAACGTCCTGCTCACAGCTGACGCCTGTCCAAC
ATGGCGGCACCAGCGGTGGCAGTTATTATGGGGACGTCGTCACTTATCAC
TGTGACCCTGGATACGAGATCAGTGGTGTTGAAGAACGGACCTGCCAGTC
GGACCAGACGTGGAGCGGCACACAGCCGACATGCANAGTGGCGATGAAAA
ACGAACATGCCAGTCGGACCAGACGTGGAGCGGCACACAGCCGACATGCA
ACCGAAAAGCCTGTCCAGAGCTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000037 | genome | Sc0000037:390196..395132 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96301_cuf4 |
| Biotype | protein_coding |
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