|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96179_cuf7 >transcript:BL96179_cuf7-protein ID=transcript:BL96179_cuf7-protein|Name=transcript:BL96179_cuf7|organism=Branchiostoma lanceolatum|type=polypeptide|length=114bp
KTQAVKGAVCPTCGMKFAYKSSLRTHQFIHSGEKPYPCTVCKKSFRQAGD
LQRHLVVHTGERRYTCQVCKKGYKQSGDLAAHMMDHTDDVRFSCPVCSKR
LKRKCDLRKHMYTH Run BLAST on NCBI mRNA from alignment at Sc0000026:332362..333785- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96179_cuf7 ID=transcript:BL96179_cuf7|Name=transcript:BL96179_cuf7|organism=Branchiostoma lanceolatum|type=mRNA|length=1424bp|location=Sequence derived from alignment at Sc0000026:332362..333785- (Branchiostoma lanceolatum)
AGAAGACGCAGGCCGTTAAAGGAGCGGTGTGTCCAACCTGTGGGATGAAG
TTTGCCTACAAGTCAAGTCTGAGGACCCACCAGTTCATACACTCAGGTGG
GGTTTTCTCTATTTGTTTATCAGAATAGATTCATGTTAATGGCCATCTCC
CCATGTTTTACAGTAGTACTGCTTTTTGCCCCTCACCCTTTCAATCCCAT
GGGGTTGCCTCAAGTTCAAGTAGGGAAGAGATCCTGTACTGTAAATTCAT
TAAATTCCGTGGTGGTTTTATTTCCCATTATGGGGGATAATGAGGTGTTG
ATCAGGTGTTCAGTAGTCATACAAGGGAGAGACATTTACAGTGTTATGTA
TTCTGGGTTTCGAGGTCACCATGAAAAATGAGAAAATAAAACCACCGTGA
AATTTTCAATATATATATTTACAAATTTTACAGTATTTGCTGCCTCATGT
GTACCATGTGTAATTAATATCTATCTCTCACTCGTCCTCCACAGGAGAGA
AGCCGTACCCCTGCACAGTGTGCAAGAAGTCCTTCCGGCAGGCAGGGGAT
CTGCAGCGCCACCTAGTGGTGCACACCGGGGAGCGCAGGTACACCTGTCA
GGTCTGCAAGAAGGGCTACAAGCAGTCAGGTAGGAGGGAAGGTTCTTCCT
CTAGTGTTGTATCCATATGTTTGCCATTAAACATATGGTACTCGTTGCCA
TCAAGTTTTGTAGGGACATCCTGACTAGATAGCTTTAAACAAGGTGAATA
CAGTTAAATGTGCAAAGCCGAAGGTTTGGTGTGACAGGTCTTTCAGTGTA
ATATAACCAGCTGCTGTCAGGTCTGCAAGAAGGGCTACAAACAATCAGGT
AGGAAGAAATATGCTTGTATCAGTTATAAGTTAAGGGTTATAAATGATAA
GTTGTGTGTAAGCTTGTCCCAGTACTGTTTTCTTTGTCATTTCATTTTTT
ACTACTATCCACAATTTTCACACATTTCCTTTATAAGCAAACTTTCCAAC
CATGCAAGTACAGAATGTCATACTCATAGAATGTACTTACATGTATTTCA
ATGAAAAGAAATGTTACTAAACAATGTATGATTACATGCAGTTTAACTCT
GTAGACATGAATTCTTGTTCTGTTGCATTTCTTTGTCATTTAAAAAGAAA
GGAGACATGTATACGTTAGCCAGTTAAACACGTGTTTGCAATTGTCTCCA
GTGCTGATGCATCTGTACATGTTTTCTATTCCTTTACCAGGTGACCTGGC
AGCTCACATGATGGACCACACTGATGACGTTCGCTTCTCCTGTCCCGTCT
GCAGCAAGAGACTGAAGCGGAAATGTGACCTCAGGAAACACATGTACACC
CATACAGGTAACCCTTATCACATGTGCACCCATACAGGTAACCCTGATCT
CAGGAAACACATGTACACCCATAC Coding sequence (CDS) from alignment at Sc0000026:332362..333785- >transcript:BL96179_cuf7 ID=transcript:BL96179_cuf7|Name=transcript:BL96179_cuf7|organism=Branchiostoma lanceolatum|type=CDS|length=1368bp|location=Sequence derived from alignment at Sc0000026:332362..333785- (Branchiostoma lanceolatum)
AAGACGCAGGCCGTTAAAGGAGCGGTGTGTCCAACCTGTGGGATGAAGTT
TGCCTACAAGTCAAGTCTGAGGACCCACCAGTTCATACACTCAGGAGAGA
AGCCGTACCCCTGCACAGTGTGCAAGAAGTCCTTCCGGCAGGCAGGGGAT
CTGCAGCGCCACCTAGTGGTGCACACCGGGGAGCGCAGGTACACCTGTCA
GGTCTGCAAGAAGGGCTACAAGCAGTCAGGTGACCTGGCAGCTCACATGA
TGGACCACACTGATGACGTTCGCTTCTCCTGTCCCGTCTGCAGCAAGAGA
CTGAAGCGGAAATGTGACCTCAGGAAACACATGTACACCCATAAGACGCA
GGCCGTTAAAGGAGCGGTGTGTCCAACCTGTGGGATGAAGTTTGCCTACA
AGTCAAGTCTGAGGACCCACCAGTTCATACACTCAGGAGAGAAGCCGTAC
CCCTGCACAGTGTGCAAGAAGTCCTTCCGGCAGGCAGGGGATCTGCAGCG
CCACCTAGTGGTGCACACCGGGGAGCGCAGGTACACCTGTCAGGTCTGCA
AGAAGGGCTACAAGCAGTCAGGTGACCTGGCAGCTCACATGATGGACCAC
ACTGATGACGTTCGCTTCTCCTGTCCCGTCTGCAGCAAGAGACTGAAGCG
GAAATGTGACCTCAGGAAACACATGTACACCCATAAGACGCAGGCCGTTA
AAGGAGCGGTGTGTCCAACCTGTGGGATGAAGTTTGCCTACAAGTCAAGT
CTGAGGACCCACCAGTTCATACACTCAGGAGAGAAGCCGTACCCCTGCAC
AGTGTGCAAGAAGTCCTTCCGGCAGGCAGGGGATCTGCAGCGCCACCTAG
TGGTGCACACCGGGGAGCGCAGGTACACCTGTCAGGTCTGCAAGAAGGGC
TACAAGCAGTCAGGTGACCTGGCAGCTCACATGATGGACCACACTGATGA
CGTTCGCTTCTCCTGTCCCGTCTGCAGCAAGAGACTGAAGCGGAAATGTG
ACCTCAGGAAACACATGTACACCCATAAGACGCAGGCCGTTAAAGGAGCG
GTGTGTCCAACCTGTGGGATGAAGTTTGCCTACAAGTCAAGTCTGAGGAC
CCACCAGTTCATACACTCAGGAGAGAAGCCGTACCCCTGCACAGTGTGCA
AGAAGTCCTTCCGGCAGGCAGGGGATCTGCAGCGCCACCTAGTGGTGCAC
ACCGGGGAGCGCAGGTACACCTGTCAGGTCTGCAAGAAGGGCTACAAGCA
GTCAGGTGACCTGGCAGCTCACATGATGGACCACACTGATGACGTTCGCT
TCTCCTGTCCCGTCTGCAGCAAGAGACTGAAGCGGAAATGTGACCTCAGG
AAACACATGTACACCCAT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000026 | genome | Sc0000026:332362..333785 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96179_cuf7 |
| Biotype | protein_coding |
|
