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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96161_evm1 >transcript:BL96161_evm1-protein ID=transcript:BL96161_evm1-protein|Name=transcript:BL96161_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=211bp
MVLLVRHSFKTRQWKLGAILFAFFLSCGVYATAPGIITLTVIGPPFCWTP
DLLGYFYVATCAGFIIGVVGIKILGKCLSSYGLMQVSFLSGGAAMVIQAL
AIYAPNRNVAFFSAAAAGCLQTVSSPVMKAVMSKMVPQTQQGGLFAPSVT
CNCACPVTGSLFALIACIESLAGVIFVPLWNTVFGVTVFILPGLVFLCFA
GALLVQAALIG Run BLAST on NCBI mRNA from alignment at xpSc0039671:376765..380421+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96161_evm1 ID=transcript:BL96161_evm1|Name=transcript:BL96161_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=3657bp|location=Sequence derived from alignment at xpSc0039671:376765..380421+ (Branchiostoma lanceolatum)
ATGGTCCTACTGGTCAGGCACTCCTTTAAGACACGTCAGTGGAAACTTGG
GGCGATCCTTTTTGCGTTCTTCCTGAGCTGCGGGGTGTACGCCACAGCGC
CAGGTATCTTTCTTTTGTTTTTTTGGCGACGCCTCAGGGGCGAGCCTAAT
GGTATATGTATGATATATATATTGTGTGCAGTTTGCAAGAATTCTAGGAA
TTGCACAGGAATGTTTCCACAGGAACTTAAGACCATAACTCATTTAGAAT
CCCTGGATGTATTGTTCTCATATTTGGTAGATGGGTAGGTCTTTGCGAAA
CCTCGAAATGATTGGATTTTGGGCCCCCTTGCAATTTTCCATCGTACTGC
AGGGGAACTTCCTCTGGTGTTCTGAACATGCTATGGTAATGATTTTTTAG
TGGTGGGCTAAGCTTTTTGGATGGAAAATAGGTCCGGTTGATTTGGACCT
CCTAGTGGCTTTTTTTGAACTGCAGGAGCTGATTTTGTCTCAAACTTTGT
AAGAGAATAACTCAAGAAGGATTGTCATGATTTTTGGTATGTAGATAGCT
GAAGTGATGATTTACATAATCATATGCCAATTATGAAAATGCAAAGGGTT
ATGAAAATTAATACATAATTTGCATAATTAATGACAAAATACTATAAATC
CATAGTGGCAAATGATAACATGCCAGAGAACCTTTAGATTCGTAGTCAAC
AACCCTAACCACAAGAGTTGCCTCCTCGCAAGGTATCATTATACTCTGCT
AGGGATTGGAACCCAGAGCCTTCAGATTCTTAGTCCGTAGCCACAAAACC
ACCATTTTCACCAAACATTATAGGTATCGTAACTCTGCTAGGGATTCAAA
GCCTGGGTGAGAACCCTTAGAATTAGTCAACAACCCTGACTTTAGACCTT
TGTTACCCCCTCACCAGGGATACCCTAACTTTAGACCTTTGTTACCCCCT
CACCAGGGATACCCTAACTTTAGACCTTTGTTACCCCCTCACCAGGGATA
CCCTAACTTTAGACCTTTGTTACCCCCTCACCAGGGATACCCTAACTTTA
GACCTTTGTTACCCCCTCACCAGGGATACCCTAACTTTAGACCTTTGTTA
CCCCCTCACCAGGGATACCCTAACTTTAGACCTTTGTTACCCCCTCACCA
GGGATACCCTAACTTTAGACCTTTGTTACCCCCTCACCAGGGATACCCTA
ACTTTAGACCTTTGTTACCCCCTCACCAGGGATCATCACCCTGACGGTGA
TCGGCCCTCCCTTCTGCTGGACTCCGGACCTGCTCGGATATTTCTACGTC
GCCACCTGCGCAGGTTTCATAATCGGTGTCGTTGGGATCAAAATACTCGG
AAAATGCCTTTCTTCCTATGGACTCATGCAGGTAAGGGACTGTACGATAN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNTCGTCAGAGGGTCGGGTTAAAAAAA
TCTTCGTAGGCCCTGCCCCCTGGTCAAATTTTTTTTCCTAGGCCCTCCCC
CCAAGCCAAAAAATTTCTCCTAGGCCCTCCCACCCAGACGAACGAACCTT
CCCCCCCCACCCCCCGATAGATACCGTACAGTCCCTAAGGGTTTAAGATA
TCCCAATTATTTTAATTACTCGAGGATGAGTGCTGTATTTTCTACTTTGA
CCATTAATATTCTCCCAGTCTACACCATAGTTTTCCAATGGACCGATCCT
GACTGTTCATCACAGTTAGCAATTCAGCCAATGATAGCATTACGATTATG
AGCTCGACCAATGAGAGATTAGCTGCATGTCCATCAAATGTTTAAATCTG
TCTGTTTTTGATTAGCATTTCTACGTTTTGACGGAGGTGGGTTTGGGGGG
GGGGGGGGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTGTGTGTGTGTG
TGTGTGTGTGTGCCTGTGTGATTGTGTGTGTGTGTGTGTTTGTGTGTGTG
TGTGTGTGTGTGTGTGCCTGTGTGTGTGTGTGTGTGAGTGTGAGTGTGTA
TGTGTGTGTGTGTGCATCTCTGTGTTCCTGTGTGTGTGTGTGTGCCTGTG
TGTGTTTGTGTGTGGGGGGGTAGGAGGGGGGGCACAGGTATATGGGATTA
CCAGGCTAGGGAAACAGGGCATCTTCTGGGCATCCAGTTGCAAAAGACGG
TGTCAATTAGTGATGTTTTAAGTGTAGCTACAAGACTGATCCTTCCTCCT
CCACAGGTGTCTTTCCTGTCTGGTGGTGCTGCAATGGTTATACAGGCACT
CGCCATCTACGCTCCCAACCGCAACGTAGCCTTCTTCTCAGGTAAGAATG
GTAGTCCCAAAGTCGTTTTTACGGTGTACACACAGTGCGAAGTGGAACGA
AATGGAACAAAATGGAATGAAATGGAGGATTCACACTCTCTGTAATTCCA
TGTTGTTCCATTTCACACTCTCTGTAGTTTCATTTCATTCCATTTCGTTC
CATCTTGTACTTTATGTACACTCCTTCTTTCGGCCGTAGGGGCAGTGGGT
TGATTATTGACCCATCCTATATAGGGACGTTCTTAACCAAAGCTGGGTAC
GCATTTTCACCTGAGTAAAGTGAGGAAATTTGTGTAAAGTACCTTTCCCA
AGGGCACAACGTCAGCGAGACAAATCAGGGGACCCCGGATTTGAACTCGG
GACCTCTTGGCTCTTGGCCGAACACCCTCCCACTATTTGGAGGTGTTGTA
TGAAGACTGGCCTACTGCTGCCAACCCCTGTGTCAGGGAACCCCGCAGCA
GTATAATCTAATACTGGATACTACTACTACTACTAATAATACTACTGCTC
CACCGCGGCGCCACTAACAATGTTCTGTCTGTGGTTACAGCTGCGGCAGC
CGGCTGCCTGCAGACCGTTTCCAGTCCGGTCATGAAGGCCGTCATGTCCA
AGATGGTGCCGCAGACCCAGCAGGGTGAGAGCACTGGGTTTATCAGTCAT
ACATGTGGTTATAAAGATGACCAATTCAATATTTAGTAGACTACGTGTAG
TAGCCAGTATTTGGGGCCAAAAATTGTTTCTACCTCCCGCAGGCAGCCTG
TTTGCCCTGAGTGTTACCTGTAACTGTGCCTGTCCCGTTACAGGCAGCCT
GTTTGCCCCGATTGTTACCTGTAACTGTGCCTGTCCCGTTACAGGCAGCC
TGTTTGCCCTGAGTGTTACCTGTAACTGTGCCTGTCCTGTTACAGGCGGC
CTGTTTGCCCCGAGTGTTACCTGTAACTGTGCCTGTCCCGTTACAGGCAG
CCTGTTTGCCCTGATAGCCTGTATCGAGAGCCTGGCAGGAGTGATCTTCG
TGCCCCTGTGGAACACCGTGTTCGGAGTGACTGTGTTCATCCTGCCTGGA
CTCGTGTTCCTGTGCTTCGCTGGGGCCCTGCTCGTCCAAGCCGCACTCAT
CGGGTAA Coding sequence (CDS) from alignment at xpSc0039671:376765..380421+ >transcript:BL96161_evm1 ID=transcript:BL96161_evm1|Name=transcript:BL96161_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=3180bp|location=Sequence derived from alignment at xpSc0039671:376765..380421+ (Branchiostoma lanceolatum)
ATGGTCCTACTGGTCAGGCACTCCTTTAAGACACGTCAGTGGAAACTTGG
GGCGATCCTTTTTGCGTTCTTCCTGAGCTGCGGGGTGTACGCCACAGCGC
CAGGGATCATCACCCTGACGGTGATCGGCCCTCCCTTCTGCTGGACTCCG
GACCTGCTCGGATATTTCTACGTCGCCACCTGCGCAGGTTTCATAATCGG
TGTCGTTGGGATCAAAATACTCGGAAAATGCCTTTCTTCCTATGGACTCA
TGCAGGTGTCTTTCCTGTCTGGTGGTGCTGCAATGGTTATACAGGCACTC
GCCATCTACGCTCCCAACCGCAACGTAGCCTTCTTCTCAGCTGCGGCAGC
CGGCTGCCTGCAGACCGTTTCCAGTCCGGTCATGAAGGCCGTCATGTCCA
AGATGGTGCCGCAGACCCAGCAGGGCGGCCTGTTTGCCCCGAGTGTTACC
TGTAACTGTGCCTGTCCCGTTACAGGCAGCCTGTTTGCCCTGATAGCCTG
TATCGAGAGCCTGGCAGGAGTGATCTTCGTGCCCCTGTGGAACACCGTGT
TCGGAGTGACTGTGTTCATCCTGCCTGGACTCGTGTTCCTGTGCTTCGCT
GGGGCCCTGCTCGTCCAAGCCGCACTCATCGGGTAAATGGTCCTACTGGT
CAGGCACTCCTTTAAGACACGTCAGTGGAAACTTGGGGCGATCCTTTTTG
CGTTCTTCCTGAGCTGCGGGGTGTACGCCACAGCGCCAGGGATCATCACC
CTGACGGTGATCGGCCCTCCCTTCTGCTGGACTCCGGACCTGCTCGGATA
TTTCTACGTCGCCACCTGCGCAGGTTTCATAATCGGTGTCGTTGGGATCA
AAATACTCGGAAAATGCCTTTCTTCCTATGGACTCATGCAGGTGTCTTTC
CTGTCTGGTGGTGCTGCAATGGTTATACAGGCACTCGCCATCTACGCTCC
CAACCGCAACGTAGCCTTCTTCTCAGCTGCGGCAGCCGGCTGCCTGCAGA
CCGTTTCCAGTCCGGTCATGAAGGCCGTCATGTCCAAGATGGTGCCGCAG
ACCCAGCAGGGCGGCCTGTTTGCCCCGAGTGTTACCTGTAACTGTGCCTG
TCCCGTTACAGGCAGCCTGTTTGCCCTGATAGCCTGTATCGAGAGCCTGG
CAGGAGTGATCTTCGTGCCCCTGTGGAACACCGTGTTCGGAGTGACTGTG
TTCATCCTGCCTGGACTCGTGTTCCTGTGCTTCGCTGGGGCCCTGCTCGT
CCAAGCCGCACTCATCGGGTAAATGGTCCTACTGGTCAGGCACTCCTTTA
AGACACGTCAGTGGAAACTTGGGGCGATCCTTTTTGCGTTCTTCCTGAGC
TGCGGGGTGTACGCCACAGCGCCAGGGATCATCACCCTGACGGTGATCGG
CCCTCCCTTCTGCTGGACTCCGGACCTGCTCGGATATTTCTACGTCGCCA
CCTGCGCAGGTTTCATAATCGGTGTCGTTGGGATCAAAATACTCGGAAAA
TGCCTTTCTTCCTATGGACTCATGCAGGTGTCTTTCCTGTCTGGTGGTGC
TGCAATGGTTATACAGGCACTCGCCATCTACGCTCCCAACCGCAACGTAG
CCTTCTTCTCAGCTGCGGCAGCCGGCTGCCTGCAGACCGTTTCCAGTCCG
GTCATGAAGGCCGTCATGTCCAAGATGGTGCCGCAGACCCAGCAGGGCGG
CCTGTTTGCCCCGAGTGTTACCTGTAACTGTGCCTGTCCCGTTACAGGCA
GCCTGTTTGCCCTGATAGCCTGTATCGAGAGCCTGGCAGGAGTGATCTTC
GTGCCCCTGTGGAACACCGTGTTCGGAGTGACTGTGTTCATCCTGCCTGG
ACTCGTGTTCCTGTGCTTCGCTGGGGCCCTGCTCGTCCAAGCCGCACTCA
TCGGGTAAATGGTCCTACTGGTCAGGCACTCCTTTAAGACACGTCAGTGG
AAACTTGGGGCGATCCTTTTTGCGTTCTTCCTGAGCTGCGGGGTGTACGC
CACAGCGCCAGGGATCATCACCCTGACGGTGATCGGCCCTCCCTTCTGCT
GGACTCCGGACCTGCTCGGATATTTCTACGTCGCCACCTGCGCAGGTTTC
ATAATCGGTGTCGTTGGGATCAAAATACTCGGAAAATGCCTTTCTTCCTA
TGGACTCATGCAGGTGTCTTTCCTGTCTGGTGGTGCTGCAATGGTTATAC
AGGCACTCGCCATCTACGCTCCCAACCGCAACGTAGCCTTCTTCTCAGCT
GCGGCAGCCGGCTGCCTGCAGACCGTTTCCAGTCCGGTCATGAAGGCCGT
CATGTCCAAGATGGTGCCGCAGACCCAGCAGGGCGGCCTGTTTGCCCCGA
GTGTTACCTGTAACTGTGCCTGTCCCGTTACAGGCAGCCTGTTTGCCCTG
ATAGCCTGTATCGAGAGCCTGGCAGGAGTGATCTTCGTGCCCCTGTGGAA
CACCGTGTTCGGAGTGACTGTGTTCATCCTGCCTGGACTCGTGTTCCTGT
GCTTCGCTGGGGCCCTGCTCGTCCAAGCCGCACTCATCGGGTAAATGGTC
CTACTGGTCAGGCACTCCTTTAAGACACGTCAGTGGAAACTTGGGGCGAT
CCTTTTTGCGTTCTTCCTGAGCTGCGGGGTGTACGCCACAGCGCCAGGGA
TCATCACCCTGACGGTGATCGGCCCTCCCTTCTGCTGGACTCCGGACCTG
CTCGGATATTTCTACGTCGCCACCTGCGCAGGTTTCATAATCGGTGTCGT
TGGGATCAAAATACTCGGAAAATGCCTTTCTTCCTATGGACTCATGCAGG
TGTCTTTCCTGTCTGGTGGTGCTGCAATGGTTATACAGGCACTCGCCATC
TACGCTCCCAACCGCAACGTAGCCTTCTTCTCAGCTGCGGCAGCCGGCTG
CCTGCAGACCGTTTCCAGTCCGGTCATGAAGGCCGTCATGTCCAAGATGG
TGCCGCAGACCCAGCAGGGCGGCCTGTTTGCCCCGAGTGTTACCTGTAAC
TGTGCCTGTCCCGTTACAGGCAGCCTGTTTGCCCTGATAGCCTGTATCGA
GAGCCTGGCAGGAGTGATCTTCGTGCCCCTGTGGAACACCGTGTTCGGAG
TGACTGTGTTCATCCTGCCTGGACTCGTGTTCCTGTGCTTCGCTGGGGCC
CTGCTCGTCCAAGCCGCACTCATCGGGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xpSc0039671 | genome | xpSc0039671:376765..380421 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96161_evm1 |
| Biotype | protein_coding |
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