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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95989_evm1 >transcript:BL95989_evm1-protein ID=transcript:BL95989_evm1-protein|Name=transcript:BL95989_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=156bp
MIAIFSMYLRFTWLSKLKAYSERTGTFLGRLYDNCNNDALAVTGYCDCEP
GLVCADYGTSSFSDFFSGDGSVVFVVKFDRAGDTRGFEKGTKMADAHIWK
TRDGRLYDNCNNDALAVTGYCDCEPGLVCADYGTSSFSDFFSGDGWCIPD
PAGNGV Run BLAST on NCBI mRNA from alignment at Sc0000274:307730..310071- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95989_evm1 ID=transcript:BL95989_evm1|Name=transcript:BL95989_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=2342bp|location=Sequence derived from alignment at Sc0000274:307730..310071- (Branchiostoma lanceolatum)
ATGATAGCAATTTTCTCAATGTATCTTCGCTTCACATGGCTCTCCAAACT
CAAGGCATACTCTGAGAGAACTGGTACGTTCCTGGTATGGGGAGATGGTA
ACATCTTGATTCAGCACCTAAAAAAAAGAAAGTTTCATCAGATACAGAAC
GATAGACTAATATCACTTTACACAGTCCATGTACATGTATAATGCAAGAT
GGACAGTTGTGTGGCCCAGTTATTTTGGAGCCACACGGGAAACTAAGGAA
CTGTGCACACACACACACACACAGGACACACATGCACAGTTAATATTCTT
CTTTTTGTCAGTCAGCCCCAGTCAGTCATTCAATCAGTCAGCCCCTCAAA
ATATTACAGATCTTAGCATAGAAAAATTATCGTCAATTTTTTAAAATTTC
TACTGACACTTGTCCCAATCAACCAAGTGTTCTGTGGGATGTTACTCCGA
AATAGATTCAAACTTACGGGCAAGTCTACAAAACAGGGCTTGTGTCATGC
CACGTAAACAAACGCCCCCCTCCCCCATTGCAACACCGAAAAACTTCTGA
CAAACAATCAAAATTCTGCAGTCCAAATACTGTTTAATGTACATCCAAAA
CGATAACATGCTACTATGTGCAATTGTTATGGGATTTCATCCACCAGGAG
TTAGTATTTGGAGTTTTAAAAAGTTATGATAGATTCTGAAACTGACAGCG
TAACCCCAGCCGCAGCGAAACCGAAACGTACTACGTAATTACACAAACAA
ATTCGCCCGCGGCCATCCTTTCGAAACGGTGAAAAATATGCAATCTGTAT
GACAAACATTGAACTTAAAACACCTTAGCAATATGCTCTACNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGTGTGTGT
GTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GCGTGCGTGCGTGCGTGTGTGTGTCAACACGATAACTTGAGAATGCTTGA
TATGTGAGTAGGTCTTCTTGAGACCTCGAAATTATCAGATTTCGGGCCCC
TATAGCTAGTTAGACCTCAGCATCCTCCTGAGGGTTTCTTGACAGTCTAA
GCAATGATTATCATTTTCCCTCTCGTTCCAGGGGCGTCTGTACGACAACT
GCAACAACGACGCCCTGGCCGTTACCGGCTACTGTGACTGCGAGCCCGGC
CTGGTGTGCGCCGACTACGGCACCAGCTCCTTCTCCGACTTCTTCAGCGG
CGACGGTTGGTGCATCCCCGANAAAAAATGCAATCTGTATGACAAACATT
GAACTTAAAACACCTTAGCAATATGCTCTACGCAATACAAGCATTTATAT
CGCTGTATTTTACCAAGGAGAAGCAAGACTTACCACTGAAGTTGACCCTC
TCAGGCTCCGTTGTCTTTGTTGTGAAATTCGATCGCGCGGGTGACACGCG
CGGGTTTGAAAAGGGCACAAAGATGGCGGATGCCCATATATGGAAAACCC
GTGACGTCATGTGAAAGCCGAGAATTACCCTCGCCTGAAAGATATGTTTT
CGTCAGCGTTCGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTG
TATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
CGTGCGTGCGTGCGTGTGTGTGTCAACACGATAACTTGAGAATGCTTGAT
ATGTGAGTAGGTCTTCTTGAGACCTCGAAATTATCAGATTTCGGGCCCCT
ATAGCTAGTTAGACCTCAGCATCCTCCTGAGGGTTTCTTGACAGTCTAAG
CAATGATTATCATTTTCCCTCTCGTTCCAGGGGCGTCTGTACGACAACTG
CAACAACGACGCCCTGGCCGTTACCGGCTACTGTGACTGCGAGCCCGGCC
TGGTGTGCGCCGACTACGGCACCAGCTCCTTCTCCGACTTCTTCAGCGGC
GACGGTTGGTGCATCCCCGATCCAGCTGGAAACGGCGTATAG Coding sequence (CDS) from alignment at Sc0000274:307730..310071- >transcript:BL95989_evm1 ID=transcript:BL95989_evm1|Name=transcript:BL95989_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=1884bp|location=Sequence derived from alignment at Sc0000274:307730..310071- (Branchiostoma lanceolatum)
ATGATAGCAATTTTCTCAATGTATCTTCGCTTCACATGGCTCTCCAAACT
CAAGGCATACTCTGAGAGAACTGGTACGTTCCTGGGGCGTCTGTACGACA
ACTGCAACAACGACGCCCTGGCCGTTACCGGCTACTGTGACTGCGAGCCC
GGCCTGGTGTGCGCCGACTACGGCACCAGCTCCTTCTCCGACTTCTTCAG
CGGCGACGGCTCCGTTGTCTTTGTTGTGAAATTCGATCGCGCGGGTGACA
CGCGCGGGTTTGAAAAGGGCACAAAGATGGCGGATGCCCATATATGGAAA
ACCCGTGACGGGCGTCTGTACGACAACTGCAACAACGACGCCCTGGCCGT
TACCGGCTACTGTGACTGCGAGCCCGGCCTGGTGTGCGCCGACTACGGCA
CCAGCTCCTTCTCCGACTTCTTCAGCGGCGACGGTTGGTGCATCCCCGAT
CCAGCTGGAAACGGCGTATAGATGATAGCAATTTTCTCAATGTATCTTCG
CTTCACATGGCTCTCCAAACTCAAGGCATACTCTGAGAGAACTGGTACGT
TCCTGGGGCGTCTGTACGACAACTGCAACAACGACGCCCTGGCCGTTACC
GGCTACTGTGACTGCGAGCCCGGCCTGGTGTGCGCCGACTACGGCACCAG
CTCCTTCTCCGACTTCTTCAGCGGCGACGGCTCCGTTGTCTTTGTTGTGA
AATTCGATCGCGCGGGTGACACGCGCGGGTTTGAAAAGGGCACAAAGATG
GCGGATGCCCATATATGGAAAACCCGTGACGGGCGTCTGTACGACAACTG
CAACAACGACGCCCTGGCCGTTACCGGCTACTGTGACTGCGAGCCCGGCC
TGGTGTGCGCCGACTACGGCACCAGCTCCTTCTCCGACTTCTTCAGCGGC
GACGGTTGGTGCATCCCCGATCCAGCTGGAAACGGCGTATAGATGATAGC
AATTTTCTCAATGTATCTTCGCTTCACATGGCTCTCCAAACTCAAGGCAT
ACTCTGAGAGAACTGGTACGTTCCTGGGGCGTCTGTACGACAACTGCAAC
AACGACGCCCTGGCCGTTACCGGCTACTGTGACTGCGAGCCCGGCCTGGT
GTGCGCCGACTACGGCACCAGCTCCTTCTCCGACTTCTTCAGCGGCGACG
GCTCCGTTGTCTTTGTTGTGAAATTCGATCGCGCGGGTGACACGCGCGGG
TTTGAAAAGGGCACAAAGATGGCGGATGCCCATATATGGAAAACCCGTGA
CGGGCGTCTGTACGACAACTGCAACAACGACGCCCTGGCCGTTACCGGCT
ACTGTGACTGCGAGCCCGGCCTGGTGTGCGCCGACTACGGCACCAGCTCC
TTCTCCGACTTCTTCAGCGGCGACGGTTGGTGCATCCCCGATCCAGCTGG
AAACGGCGTATAGATGATAGCAATTTTCTCAATGTATCTTCGCTTCACAT
GGCTCTCCAAACTCAAGGCATACTCTGAGAGAACTGGTACGTTCCTGGGG
CGTCTGTACGACAACTGCAACAACGACGCCCTGGCCGTTACCGGCTACTG
TGACTGCGAGCCCGGCCTGGTGTGCGCCGACTACGGCACCAGCTCCTTCT
CCGACTTCTTCAGCGGCGACGGCTCCGTTGTCTTTGTTGTGAAATTCGAT
CGCGCGGGTGACACGCGCGGGTTTGAAAAGGGCACAAAGATGGCGGATGC
CCATATATGGAAAACCCGTGACGGGCGTCTGTACGACAACTGCAACAACG
ACGCCCTGGCCGTTACCGGCTACTGTGACTGCGAGCCCGGCCTGGTGTGC
GCCGACTACGGCACCAGCTCCTTCTCCGACTTCTTCAGCGGCGACGGTTG
GTGCATCCCCGATCCAGCTGGAAACGGCGTATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000274 | genome | Sc0000274:307730..310071 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95989_evm1 |
| Biotype | protein_coding |
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