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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95954_evm0 >transcript:BL95954_evm0-protein ID=transcript:BL95954_evm0-protein|Name=transcript:BL95954_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=233bp
MFHLLEWRNHGVPWPSVSLPITQLLSTIVKRLNEGSGFYQMFSVLVDIII
LKNGGKSFTYLEEFPVRLLPALPKVAGHNGEQFIVVALEYGKNFSGPGND
IFRSDRATGEPSDAHNSNFLHPVFYHYEKLPTEADMLARPEKWILPRPNH
LHHTVEDFLTSFTAPKSHILPIRRFLETSLDTDLRNFFAESCFKMALKHR
SVPQECQEHYLQGQGLIPTAPIHTHAVKSGLVM Run BLAST on NCBI mRNA from alignment at Sc0000241:411714..414192- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95954_evm0 ID=transcript:BL95954_evm0|Name=transcript:BL95954_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=2479bp|location=Sequence derived from alignment at Sc0000241:411714..414192- (Branchiostoma lanceolatum)
ATGTTCCACCTGCTGGAGTGGCGTAACCACGGCGTTCCCTGGCCCTCCGT
CAGCCTCCCCATCACCCAGCTGCTCAGCACCATCGTCAAGCGGCTGAACG
AAGGCTCAGGGTTCTACCAGATGTTCAGCGTACTGGTGGATATCATCATT
CTGAAAAAGTGAGGGAGAAATTTTTTTTTGTTAATTTACACTGTCAATTT
CTATATATAAAACACAATGACATGTTCATTTAGGTATTTTGTAAACTTTT
AAGTAGCGAATCCTTTTTTATTATTGGCATTATTTTGCAAAGATTGAAAA
GTCTGTCTATTGTTAAGAGTCATGATTGACTGCGTTGGCCAATGTCCAAT
GAAAGGAATAACAAACTGTTTTCAAGACTTCTTGGAACTTTTCTGAGTTC
TAGGAACTGTTCCTAATTATAAGTTCTTGGAACTGTTGGTAAGCTCTGAA
AACTGTTGCTAAGTTCCTGGAACTGTTACTGAGTTCTTGGAACTCTTAGT
CTTACTGAGTTCTAGGAACTGTTCCTAAGTTCTTGACACTGTGACCTTTT
AGTATGTAGAGTGTGGACGTTCAGTGTCGTGACAGGATTTGCAATACTTA
TTCCTCCCTGTGTCCACAGCGGTGGAAAGTCCTTCACGTATCTGGAAGAA
TTTCCTGTCCGTCTGCTACCTGCTCTCCCGAAGGTCGCAGGTCACAACGG
GGAGCAGTTCATAGTGGTGGCACTGGAGTATGGCAAGAACTTTTCAGGTG
GGCAGTCACATTGGTACAGTATATATGGCCAACATTATGTAGTCTGACAA
CAATGTCTATCAGATTCAGAGCTTCCTCATCACACTTTCTCAGTGGCAAA
TCTTCCACAAAATCAGTTTGGAAATAACAGTTTTGTTAACTTAATTAGGT
ACAATATATGCCTGGCTAGCTTCTGTATAATATGTATTTCGACATACAAA
TGTGTTAGTAGAGTAGACCGGAAGGTTAACTGTGTATCTTAAATATATAC
TTTTCCAATACATGCATGTCCGTATTTACATCAGGATATATCTTATTGAT
GTGTAATGGTACCTGTTGACATCACTTTTAGTTCCTTTATGTAGTAAAGT
GACTGATGAATTCAACTCCTTATATCTTTGACCTCTAGGCCCTGGTAACG
ACATATTCCGTTCAGACCGAGCCACAGGAGAGCCCAGCGATGCTCACAAC
TCCAACTTCCTCCATCCTGTCTTCTACCATTACGAAAAGCTTCCCACAGG
TCAGTATTCATTGGAATACGTGTTTGTGCTTTTGATATTTGGTTGCAAGA
GCACAAAATGCACCAAACTTTTCAATTGATAGTTCAAAAATGCAGTTTGA
AATGCAGAAAATAGACACGTAGTTAATCAATACATATTTTTCTAAGTGCC
TTTGTCACATCATACATATAGGTTAACTAATAGATCTACAGCTGTAGGTT
TAAAACAACCTAGCAAAGAGTTGTAATTGCATATGCCTAACAAAGAATTT
CCGGTGAAAAAGACTCTAAAAATGGTACATACTGCTTTCTCTACTTTGCA
CTGATAGCATTTGGGAAAGAGTATGATGGTTAAACACACAGCACTACCAG
TGGACTAGCCCTCTGCTGTAGTGACTTGCACAAAGGTGTGTGGCCCAGGG
CTGCCGAAATGAAGATATTGCTCAGACTGCACGCTTTATAAAAACTATAC
AGCATTACCACCGTCCTCATGAGTGAGATATGATATATCTTTATTGTCCA
TTTGCCTCTCCACTTGTAGAAGCAGACATGTTGGCCCGCCCAGAGAAATG
GATCCTTCCCCGCCCGAACCACCTGCACCACACCGTGGAGGACTTCCTCA
CCAGCTTCACCGCCCCCAAGAGTCACATCCTCCCCATCAGACGCTTCCTG
GAGACGAGTCTGGACACTGACCTCAGGTAGGGACAGAGGTTACAGGTTTT
GGGTCATAGGCACAAGTCTTCATACTGACCTCAGGTAGGGACAAAGGTTA
GAGATTATGGGTCATAGGGGCTATAAGTCAGTGACCTCAGGTAGGGACAA
AGTTTAAAGGTTATGGGTTGTAGGGATAAGTTTGGACACTGACCTCAGGT
AGGGACAAAATTTAGAGGTTATGAGTCCTAAGGACAATTCTGAACATGTC
TGCATAGAGGGCATGGGTTGGAGGTTATTGATCATTGAAGCAAATAGTGT
TTGTTGCCAGTAGATTTGTGGAATACTCCACAAAACACAACAGAAGATAA
GATAACAATAACATTGTCTGATAGTATCCTATGTAGGATCTGCTTTTAAA
AAGTAAAACACATTGTCTCACTACCTTTCAGGAATTTCTTCGCTGAATCC
TGCTTCAAGATGGCGCTGAAACACCGTAGTGTACCTCAGGAGTGCCAGGA
ACACTACCTGCAGGGCCAGGGGCTCATCCCTACAGCCCCCATACACACAC
ATGCTGTCAAGTCTGGTCTGGTCATGTAG Coding sequence (CDS) from alignment at Sc0000241:411714..414192- >transcript:BL95954_evm0 ID=transcript:BL95954_evm0|Name=transcript:BL95954_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=3510bp|location=Sequence derived from alignment at Sc0000241:411714..414192- (Branchiostoma lanceolatum)
ATGTTCCACCTGCTGGAGTGGCGTAACCACGGCGTTCCCTGGCCCTCCGT
CAGCCTCCCCATCACCCAGCTGCTCAGCACCATCGTCAAGCGGCTGAACG
AAGGCTCAGGGTTCTACCAGATGTTCAGCGTACTGGTGGATATCATCATT
CTGAAAAACGGTGGAAAGTCCTTCACGTATCTGGAAGAATTTCCTGTCCG
TCTGCTACCTGCTCTCCCGAAGGTCGCAGGTCACAACGGGGAGCAGTTCA
TAGTGGTGGCACTGGAGTATGGCAAGAACTTTTCAGGCCCTGGTAACGAC
ATATTCCGTTCAGACCGAGCCACAGGAGAGCCCAGCGATGCTCACAACTC
CAACTTCCTCCATCCTGTCTTCTACCATTACGAAAAGCTTCCCACAGAAG
CAGACATGTTGGCCCGCCCAGAGAAATGGATCCTTCCCCGCCCGAACCAC
CTGCACCACACCGTGGAGGACTTCCTCACCAGCTTCACCGCCCCCAAGAG
TCACATCCTCCCCATCAGACGCTTCCTGGAGACGAGTCTGGACACTGACC
TCAGGAATTTCTTCGCTGAATCCTGCTTCAAGATGGCGCTGAAACACCGT
AGTGTACCTCAGGAGTGCCAGGAACACTACCTGCAGGGCCAGGGGCTCAT
CCCTACAGCCCCCATACACACACATGCTGTCAAGTCTGGTCTGGTCATGT
AGATGTTCCACCTGCTGGAGTGGCGTAACCACGGCGTTCCCTGGCCCTCC
GTCAGCCTCCCCATCACCCAGCTGCTCAGCACCATCGTCAAGCGGCTGAA
CGAAGGCTCAGGGTTCTACCAGATGTTCAGCGTACTGGTGGATATCATCA
TTCTGAAAAACGGTGGAAAGTCCTTCACGTATCTGGAAGAATTTCCTGTC
CGTCTGCTACCTGCTCTCCCGAAGGTCGCAGGTCACAACGGGGAGCAGTT
CATAGTGGTGGCACTGGAGTATGGCAAGAACTTTTCAGGCCCTGGTAACG
ACATATTCCGTTCAGACCGAGCCACAGGAGAGCCCAGCGATGCTCACAAC
TCCAACTTCCTCCATCCTGTCTTCTACCATTACGAAAAGCTTCCCACAGA
AGCAGACATGTTGGCCCGCCCAGAGAAATGGATCCTTCCCCGCCCGAACC
ACCTGCACCACACCGTGGAGGACTTCCTCACCAGCTTCACCGCCCCCAAG
AGTCACATCCTCCCCATCAGACGCTTCCTGGAGACGAGTCTGGACACTGA
CCTCAGGAATTTCTTCGCTGAATCCTGCTTCAAGATGGCGCTGAAACACC
GTAGTGTACCTCAGGAGTGCCAGGAACACTACCTGCAGGGCCAGGGGCTC
ATCCCTACAGCCCCCATACACACACATGCTGTCAAGTCTGGTCTGGTCAT
GTAGATGTTCCACCTGCTGGAGTGGCGTAACCACGGCGTTCCCTGGCCCT
CCGTCAGCCTCCCCATCACCCAGCTGCTCAGCACCATCGTCAAGCGGCTG
AACGAAGGCTCAGGGTTCTACCAGATGTTCAGCGTACTGGTGGATATCAT
CATTCTGAAAAACGGTGGAAAGTCCTTCACGTATCTGGAAGAATTTCCTG
TCCGTCTGCTACCTGCTCTCCCGAAGGTCGCAGGTCACAACGGGGAGCAG
TTCATAGTGGTGGCACTGGAGTATGGCAAGAACTTTTCAGGCCCTGGTAA
CGACATATTCCGTTCAGACCGAGCCACAGGAGAGCCCAGCGATGCTCACA
ACTCCAACTTCCTCCATCCTGTCTTCTACCATTACGAAAAGCTTCCCACA
GAAGCAGACATGTTGGCCCGCCCAGAGAAATGGATCCTTCCCCGCCCGAA
CCACCTGCACCACACCGTGGAGGACTTCCTCACCAGCTTCACCGCCCCCA
AGAGTCACATCCTCCCCATCAGACGCTTCCTGGAGACGAGTCTGGACACT
GACCTCAGGAATTTCTTCGCTGAATCCTGCTTCAAGATGGCGCTGAAACA
CCGTAGTGTACCTCAGGAGTGCCAGGAACACTACCTGCAGGGCCAGGGGC
TCATCCCTACAGCCCCCATACACACACATGCTGTCAAGTCTGGTCTGGTC
ATGTAGATGTTCCACCTGCTGGAGTGGCGTAACCACGGCGTTCCCTGGCC
CTCCGTCAGCCTCCCCATCACCCAGCTGCTCAGCACCATCGTCAAGCGGC
TGAACGAAGGCTCAGGGTTCTACCAGATGTTCAGCGTACTGGTGGATATC
ATCATTCTGAAAAACGGTGGAAAGTCCTTCACGTATCTGGAAGAATTTCC
TGTCCGTCTGCTACCTGCTCTCCCGAAGGTCGCAGGTCACAACGGGGAGC
AGTTCATAGTGGTGGCACTGGAGTATGGCAAGAACTTTTCAGGCCCTGGT
AACGACATATTCCGTTCAGACCGAGCCACAGGAGAGCCCAGCGATGCTCA
CAACTCCAACTTCCTCCATCCTGTCTTCTACCATTACGAAAAGCTTCCCA
CAGAAGCAGACATGTTGGCCCGCCCAGAGAAATGGATCCTTCCCCGCCCG
AACCACCTGCACCACACCGTGGAGGACTTCCTCACCAGCTTCACCGCCCC
CAAGAGTCACATCCTCCCCATCAGACGCTTCCTGGAGACGAGTCTGGACA
CTGACCTCAGGAATTTCTTCGCTGAATCCTGCTTCAAGATGGCGCTGAAA
CACCGTAGTGTACCTCAGGAGTGCCAGGAACACTACCTGCAGGGCCAGGG
GCTCATCCCTACAGCCCCCATACACACACATGCTGTCAAGTCTGGTCTGG
TCATGTAGATGTTCCACCTGCTGGAGTGGCGTAACCACGGCGTTCCCTGG
CCCTCCGTCAGCCTCCCCATCACCCAGCTGCTCAGCACCATCGTCAAGCG
GCTGAACGAAGGCTCAGGGTTCTACCAGATGTTCAGCGTACTGGTGGATA
TCATCATTCTGAAAAACGGTGGAAAGTCCTTCACGTATCTGGAAGAATTT
CCTGTCCGTCTGCTACCTGCTCTCCCGAAGGTCGCAGGTCACAACGGGGA
GCAGTTCATAGTGGTGGCACTGGAGTATGGCAAGAACTTTTCAGGCCCTG
GTAACGACATATTCCGTTCAGACCGAGCCACAGGAGAGCCCAGCGATGCT
CACAACTCCAACTTCCTCCATCCTGTCTTCTACCATTACGAAAAGCTTCC
CACAGAAGCAGACATGTTGGCCCGCCCAGAGAAATGGATCCTTCCCCGCC
CGAACCACCTGCACCACACCGTGGAGGACTTCCTCACCAGCTTCACCGCC
CCCAAGAGTCACATCCTCCCCATCAGACGCTTCCTGGAGACGAGTCTGGA
CACTGACCTCAGGAATTTCTTCGCTGAATCCTGCTTCAAGATGGCGCTGA
AACACCGTAGTGTACCTCAGGAGTGCCAGGAACACTACCTGCAGGGCCAG
GGGCTCATCCCTACAGCCCCCATACACACACATGCTGTCAAGTCTGGTCT
GGTCATGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000241 | genome | Sc0000241:411714..414192 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95954_evm0 |
| Biotype | protein_coding |
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