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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95938_evm0 >transcript:BL95938_evm0-protein ID=transcript:BL95938_evm0-protein|Name=transcript:BL95938_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=171bp
MAILSVLLVFVLHITVGLVEAQQPCCTPLQWQATLGVTYGQAFIDSNTAQ
AVINVTAEFAFDWNKRTTAMWMTGTQYSPLVPKPQPIHTAYIWDHATGVM
WTIDLTRQSCQHSELSKGPVSKLCVADDAVHVATAHLGPSQMVCDIFKFK
WPVGEGTAAAVATVARKGNVY Run BLAST on NCBI mRNA from alignment at Sc0000228:143512..147203+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95938_evm0 ID=transcript:BL95938_evm0|Name=transcript:BL95938_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=3692bp|location=Sequence derived from alignment at Sc0000228:143512..147203+ (Branchiostoma lanceolatum)
ATGGCGATTCTATCGGTTCTACTTGTGTTCGTGCTTCACATTACGGTGGG
ACTTGTGGAGGCACAACAGCCATGCTGCACACCGCTACAGTGGCAGGCAA
CACTGGGGGTCACATACGGACAGGTGCACAGAACGTTACAGTCAATACGT
GGGTGGGCGGTACTGTGGGAACAATATGTACATTTCCATCCATTCACTAC
TAAGGGTCTGGCAAGCCAATGGGTTAGACTCTGGGTGTACAACCCTATAG
CTGACACGTAATTGATAAAGGAATACGGTCTGTTATAACGAAACAGCTTT
GGGCTGTACTGCTGCAGTTTGATGTTTCCTTGTCTTCCATTCTCTTGTTA
GACTTTTTGTTCACGACTTTGATCTAATAAGTACTAGTAGAACGCGTACA
TTTAGAAATTTCCGGGACTGGTACAATACTAGTAAAAATACGTCTCTTTT
TAGGCCATTTATCGTTTTGTTTCCGTACTTTTGAACTTTGAGTCATCCTC
AACATGCAAACAAAACATTGGGGATACTCACTGACGTTTTTCATGGCATA
GATCACGAACTTTGAGTGATTTGACTGGTAAAACATAGAGTCAATCAGGA
TCCAATTGAAATTTCCAAGGGTATGATGTACACCCCTCTTGAAGTTTAAA
GTTGATAAATGTTTTGTTTCCCTACTTTGATTTTGGACTTTGATTCATCC
TCAACAAGAAAACGAAAACTGGTGATAGTTAATAACTCACTGGAACAACA
AATGTTTTCCATGTATGTTGTTTACACAGGCCTTTATTGACAGTAATACT
GCCCAAGCAGTTATAAACGTAACTGCAGAGTTCGCCTTCGACTGGAACAA
GCGCACGACAGCGATGTGGATGACAGGTACTCAGTACAGCCCTCTCGTTC
CCAAACCTCAACCCATTCACACTGCCTACATCTGGGACCACGCGACGGTT
AGTGAATATGGAGCCAAACCTGTACCAGTGATTACCTTTGTAACAACCTC
AGTTAAACCTGTACTAGTGACCATCTCTGTAATAGGCACAGTCAAACCTG
TACTAGTGACCACCTCTGTAATAGGCACAGTCAAACCTGTACTAGTGACC
ACCTCTGCAATAGGCAGTGTCAACCCTGTACTAGTGGCGGTAACGTGGCC
ACTGGTACAGATTTGACTGTGCTTATTACAGAGGTGGTCTGACCGCCTCT
GTAATAAACACAGTCAAATCTGTACTAGTGACCACCTCTGCAATAAGCAC
AGTCAAATCTGTTATAGGGGCCACCTAACGTTAGATATGGAAAGAAACAA
CTATCGGAAAGTCTTCGCAAGATATGAGTTTTCTTTGCCAGCAAAATGAC
ATTTAACTAGGGTCAACAATTTATCGGCTTGTTCTCAGGGAGTAATGTGG
ACCATCGACCTGACGAGACAAAGCTGCCAGCACAGCGAGCTGAGTAAAGG
TCCTGTGTCCAAGCTGTGCGTTGCGGGTATGTCACAACAAATCGTTATTA
AACTAAGGCCATATTGCGCCGAAAGTAGTTACTCCTTTTGGCGTATCTAA
ATACCTGGATGTCTAACCTCCATCGACGTATTTTAATATTGCCTTAAAAG
GCCATGTTGATTTGATTATATGGACGACATCCTCTGGGAACGCCAAAACT
GATGCGAGCGTGCGAATGAAAAAAAGCTTCGGCCCAAATAAAAAGTTGCC
TTTATTATGAAAAACTACGTGGTCAGAAAGGTTGAGCAAGTGACTAGAAA
CACAGAGCATGGTATAGCGCATAAAAGATTCTTCATTTACATTTCTTCAC
CACATCTTCTTCTTGGAATTAATTTTGTCATATGCATTCTACGACATTAC
TACCGTTTTCCTTTTTTTTTGCAATTGACGGCATATATTTGATAATTTCC
AGCATTTTACAGTATTGTCGAAAACTTGCTTTTTTGTGGAAACGGACAAA
AATTTAATGCACGCGCGGATGTCATCCATATACTGAAATAATCCAGTCAA
CATGGCCCAACAGTTGATTATCACAGAGACGAAAGAAAAGTTGATGGAGT
AGATCGACAAATAATGTAGCTTGGTCCCAGTCTGCACGGGTCGGCTTGGG
TGTGTTTTACGGGCCAAGTCTGCTAAATTGACCCGTTTCTGTCAGTCTGT
CTAAGCTGCCATATAGAGTTTAGCAGCCGTCGTAGTTCTGCCGCCACTGT
AGAGACCAGGAAGGACCTAACTACCCCTCGGGCGGGCTAATCTGTCTGGG
CTGGTGGGCATTACTCCCAGCCCCGCAGAGAAACCGGGGAGCTTCCGACG
GTATGGTTGCCAGGTTACAAATAGTGAGAAAGTCTGGGACAAAAGTTTAA
ACGTTCTGATGTGCTCCTTCCAAGATGACGCCGTCCATGTCGCTACCGCA
CATCTTGGTCCAAGTCAGATGGTCTGCGACATTTTCAAGTTCAAGTGGCC
GGTGGGTGAGGGTACTGCAGCTGCTGTGGCTACTGTGGCGAGGAAAGGTA
TGGCATGTCGTGAATTCAGTTAACAGTTTTCTGGAAATATCTTTATTGTG
ATGATCATGGAAACAAACGTTAACCATTGACCTTACACTGTTTTAAAAGA
CCTTGACCTTGTTGACACATTATAGTTACTAATGTTAATGATAAGGATTT
GCAGCGTTATTATGGCCGTAAGGAATGTGTAAAATAACACTGTTATTGCA
AAATTTCATACGAAATTCCAGATGATTCTGTCACAGTGGAGTGTATTTCC
AGGTTGTACACCGGTGAGGATGTCCATACTGGACGGTAGCCCAACCAGCG
GAGGTATCTTCTTTGACGCCCGGGTTTACAACATGAAGGAAGGGATACAC
AACACCAGTCTACTGTCTCCCCCTGAGTACTGCGCCCACAGCAACAATGT
AATGTCATAATGCCACAATCACTTTAGATGGTCATGGAAAATAATCTATG
TGGTAGTGGGCAGGTGAAAGTTCTCTTGAGTTCATACCACTGACTTTTAT
TTTTGAAGAATTGATCGTGAGATTGTGCTTTGCTATCCTTGTTACGTTGA
ATGCCAGTCTTTGTGATTAGAAAATTGCAATTGTTTACATCTAGCCACAC
TACACAGGCGTATCACATCTGATCCATCTTATAAATCAAAGGTGTTCAAC
TTCTTATCAAATTATACCGTTTTATGACAGCAGTGATGTGGTCGTCTACG
AAAACGCTTATCATATATATTTCCTGTCTTACAGACTACAGCACACAAGC
CACCTCCCTCCTTGGTGAAGCTTTTCTCAAGTCTGTGAGAGACCATCGAC
GTCTAGCACGATCAGTCACGGTGAACAGGAATCTTGGTGTTCTAGGAATG
ACAATCAGGCAAAGACATAACACAGTGTTTTAATAAAGATCAGACCGGAA
TCCTTTGTACCCATGTCATGTTTCCATTCTTGTTCTTTTCTGGTCTTAAT
TGTTGTTTCTCAAATTAATGCTCGTTTCATGTGGATTCACGAGGACTTGA
ATGTTTTCAGATATGACATCACCTTGATAAATTGTTGTCAGTCTGTTTTT
CTTGAGAATTCTCAATTTGAAAGCTAAGACGTCTTTGTAGGTAAGCGAGT
GGTGCCTATCATTCTACAGACAGCCATAATGCTCACACTTTGTGATGAGT
AACAGAATAATGTATCCATTCCATTTAGGTAACGTCTACTAA Coding sequence (CDS) from alignment at Sc0000228:143512..147203+ >transcript:BL95938_evm0 ID=transcript:BL95938_evm0|Name=transcript:BL95938_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=2580bp|location=Sequence derived from alignment at Sc0000228:143512..147203+ (Branchiostoma lanceolatum)
ATGGCGATTCTATCGGTTCTACTTGTGTTCGTGCTTCACATTACGGTGGG
ACTTGTGGAGGCACAACAGCCATGCTGCACACCGCTACAGTGGCAGGCAA
CACTGGGGGTCACATACGGACAGGCCTTTATTGACAGTAATACTGCCCAA
GCAGTTATAAACGTAACTGCAGAGTTCGCCTTCGACTGGAACAAGCGCAC
GACAGCGATGTGGATGACAGGTACTCAGTACAGCCCTCTCGTTCCCAAAC
CTCAACCCATTCACACTGCCTACATCTGGGACCACGCGACGGGAGTAATG
TGGACCATCGACCTGACGAGACAAAGCTGCCAGCACAGCGAGCTGAGTAA
AGGTCCTGTGTCCAAGCTGTGCGTTGCGGATGACGCCGTCCATGTCGCTA
CCGCACATCTTGGTCCAAGTCAGATGGTCTGCGACATTTTCAAGTTCAAG
TGGCCGGTGGGTGAGGGTACTGCAGCTGCTGTGGCTACTGTGGCGAGGAA
AGGTAACGTCTACTAAATGGCGATTCTATCGGTTCTACTTGTGTTCGTGC
TTCACATTACGGTGGGACTTGTGGAGGCACAACAGCCATGCTGCACACCG
CTACAGTGGCAGGCAACACTGGGGGTCACATACGGACAGGCCTTTATTGA
CAGTAATACTGCCCAAGCAGTTATAAACGTAACTGCAGAGTTCGCCTTCG
ACTGGAACAAGCGCACGACAGCGATGTGGATGACAGGTACTCAGTACAGC
CCTCTCGTTCCCAAACCTCAACCCATTCACACTGCCTACATCTGGGACCA
CGCGACGGGAGTAATGTGGACCATCGACCTGACGAGACAAAGCTGCCAGC
ACAGCGAGCTGAGTAAAGGTCCTGTGTCCAAGCTGTGCGTTGCGGATGAC
GCCGTCCATGTCGCTACCGCACATCTTGGTCCAAGTCAGATGGTCTGCGA
CATTTTCAAGTTCAAGTGGCCGGTGGGTGAGGGTACTGCAGCTGCTGTGG
CTACTGTGGCGAGGAAAGGTAACGTCTACTAAATGGCGATTCTATCGGTT
CTACTTGTGTTCGTGCTTCACATTACGGTGGGACTTGTGGAGGCACAACA
GCCATGCTGCACACCGCTACAGTGGCAGGCAACACTGGGGGTCACATACG
GACAGGCCTTTATTGACAGTAATACTGCCCAAGCAGTTATAAACGTAACT
GCAGAGTTCGCCTTCGACTGGAACAAGCGCACGACAGCGATGTGGATGAC
AGGTACTCAGTACAGCCCTCTCGTTCCCAAACCTCAACCCATTCACACTG
CCTACATCTGGGACCACGCGACGGGAGTAATGTGGACCATCGACCTGACG
AGACAAAGCTGCCAGCACAGCGAGCTGAGTAAAGGTCCTGTGTCCAAGCT
GTGCGTTGCGGATGACGCCGTCCATGTCGCTACCGCACATCTTGGTCCAA
GTCAGATGGTCTGCGACATTTTCAAGTTCAAGTGGCCGGTGGGTGAGGGT
ACTGCAGCTGCTGTGGCTACTGTGGCGAGGAAAGGTAACGTCTACTAAAT
GGCGATTCTATCGGTTCTACTTGTGTTCGTGCTTCACATTACGGTGGGAC
TTGTGGAGGCACAACAGCCATGCTGCACACCGCTACAGTGGCAGGCAACA
CTGGGGGTCACATACGGACAGGCCTTTATTGACAGTAATACTGCCCAAGC
AGTTATAAACGTAACTGCAGAGTTCGCCTTCGACTGGAACAAGCGCACGA
CAGCGATGTGGATGACAGGTACTCAGTACAGCCCTCTCGTTCCCAAACCT
CAACCCATTCACACTGCCTACATCTGGGACCACGCGACGGGAGTAATGTG
GACCATCGACCTGACGAGACAAAGCTGCCAGCACAGCGAGCTGAGTAAAG
GTCCTGTGTCCAAGCTGTGCGTTGCGGATGACGCCGTCCATGTCGCTACC
GCACATCTTGGTCCAAGTCAGATGGTCTGCGACATTTTCAAGTTCAAGTG
GCCGGTGGGTGAGGGTACTGCAGCTGCTGTGGCTACTGTGGCGAGGAAAG
GTAACGTCTACTAAATGGCGATTCTATCGGTTCTACTTGTGTTCGTGCTT
CACATTACGGTGGGACTTGTGGAGGCACAACAGCCATGCTGCACACCGCT
ACAGTGGCAGGCAACACTGGGGGTCACATACGGACAGGCCTTTATTGACA
GTAATACTGCCCAAGCAGTTATAAACGTAACTGCAGAGTTCGCCTTCGAC
TGGAACAAGCGCACGACAGCGATGTGGATGACAGGTACTCAGTACAGCCC
TCTCGTTCCCAAACCTCAACCCATTCACACTGCCTACATCTGGGACCACG
CGACGGGAGTAATGTGGACCATCGACCTGACGAGACAAAGCTGCCAGCAC
AGCGAGCTGAGTAAAGGTCCTGTGTCCAAGCTGTGCGTTGCGGATGACGC
CGTCCATGTCGCTACCGCACATCTTGGTCCAAGTCAGATGGTCTGCGACA
TTTTCAAGTTCAAGTGGCCGGTGGGTGAGGGTACTGCAGCTGCTGTGGCT
ACTGTGGCGAGGAAAGGTAACGTCTACTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000228 | genome | Sc0000228:143512..147203 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95938_evm0 |
| Biotype | protein_coding |
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