transcript:BL95828_evm0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL95828_evm0
Unique Nametranscript:BL95828_evm0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL95828_evm0

>transcript:BL95828_evm0-protein ID=transcript:BL95828_evm0-protein|Name=transcript:BL95828_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=110bp
MNVTNEDYPKRVLRGLNNLRKRAELTDVVLEVEGRSPYFRTMFTSGYAEA
KQERISIQDVSEVAMATILDYAYTGCLQTEPDQVQAVMSAARLLQVGFVG
CKAAEYMKDL
Run BLAST on NCBI

mRNA from alignment at Sc0000153:370996..372448+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL95828_evm0 ID=transcript:BL95828_evm0|Name=transcript:BL95828_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=1453bp|location=Sequence derived from alignment at Sc0000153:370996..372448+ (Branchiostoma lanceolatum)
ATGAACGTAACGAACGAGGACTACCCTAAGAGGGTTCTCCGCGGGCTGAA CAACCTGAGGAAGCGGGCTGAGCTGACAGATGTGGTTCTGGAGGTGGAGG GGAGAAGGTAAGGTGGACTATTGGGGAGGGGGGCACAAAAGAGCTGGGGT TGGTGGAAGAACTCGTCCAGTCTGTCTGAAAAGAGGGTCTGCATGGGTGT GTGTGTCCTGTCCTGTATAGAATATGAGACACTAACTCCGCTTAACGAAT GATTTATCAATAACGGTCTACTAATGCTTTAATTTCACCATTTAATCAAA ATGTTAACTGTTTATATTTTACATAGCACTACTTGTTATCCTGACCCAAT AATTTGCCCTGGGCAAGTCGTAAAGGGAGTGCTCCTACTGTGAGCTGCCC AGCAGGTTGAGGGCTGGATTAATCCCCCATAATCACATAAATTCATAAAA GGATTAGATGTCTGCCAGCCAGATTACCATAATAACTGTCAGAGAATTCA AACTTTGTATCAAACCATGCAGAATGGCCCAGATATCTATTGAAAAAGTC ACATAATCCAAGGAAGTTTCAAGCAGATAAGATCCCTTGGATAATAAAGA CAATATTTACTATCTACAACTTTCAGTTTTAGGGAAGTCAACCTTGTTCA AATTTTCAAACTTTCAAATCGTCCCTGTCAATGTTGTGTCAGAGTATCTA AATGTATCTAAATTTCCAATGTCTTCCCCACATTAGCTTTGGTAGTTGTG TGTCTAGAGATGTTTGTGTCTTCTTGTTGTAGCAAGGAGGTTATATAGAC TTCCTTGGTTGTAGTAACCAGCATAGACAGGGGCCCTATACTATATAGAA CAGTACATATAACTGCTAGGCAATGTCTCAAACTAAATCAAGTAACCCAG TAAGGCGTAGTCAGATGCCAGATTTCCCCATGAATAGTCACAACAGAGCG ACTGCTAATGACATCCTGGTTCCTGCACACTAAACCACAGTATTCGTCGA ATTATTGTGAAAAAAATACAATATTATAGCATGACGGAAAACTCTACTCA TGAAAATATCTTAAATTTTCAAGTTTCCCCTGCCATCGTGCTGTCCTGGC ATCGTGCAGTCCCTACTTCCGTACCATGTTCACCAGCGGCTACGCTGAGG CCAAACAGGAAAGGATCAGCATCCAGGATGTGAGTGAGGTAGCCATGGCA ACCATTCTGGACTACGCCTACACCGGCTGCCTTCAGACAGAGCCAGACCA GGTCCAGGCTGTGATGTCTGCAGCCAGACTGCTCCAGGTAAGGATACTGA TTCTCTCATATTACCCAGTAAGGCCACACCATGTTGTGTTTTCTCCCCTA TGAGTAAACTGAGTGTGCAGAGAAAGTTGTCTATAACTACCTTTATAACT TCCAGGTGGGTTTTGTAGGCTGTAAAGCGGCAGAATACATGAAGGACTTA TAA

Coding sequence (CDS) from alignment at Sc0000153:370996..372448+

>transcript:BL95828_evm0 ID=transcript:BL95828_evm0|Name=transcript:BL95828_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=999bp|location=Sequence derived from alignment at Sc0000153:370996..372448+ (Branchiostoma lanceolatum)
ATGAACGTAACGAACGAGGACTACCCTAAGAGGGTTCTCCGCGGGCTGAA
CAACCTGAGGAAGCGGGCTGAGCTGACAGATGTGGTTCTGGAGGTGGAGG
GGAGAAGTCCCTACTTCCGTACCATGTTCACCAGCGGCTACGCTGAGGCC
AAACAGGAAAGGATCAGCATCCAGGATGTGAGTGAGGTAGCCATGGCAAC
CATTCTGGACTACGCCTACACCGGCTGCCTTCAGACAGAGCCAGACCAGG
TCCAGGCTGTGATGTCTGCAGCCAGACTGCTCCAGGTGGGTTTTGTAGGC
TGTAAAGCGGCAGAATACATGAAGGACTTATAAATGAACGTAACGAACGA
GGACTACCCTAAGAGGGTTCTCCGCGGGCTGAACAACCTGAGGAAGCGGG
CTGAGCTGACAGATGTGGTTCTGGAGGTGGAGGGGAGAAGTCCCTACTTC
CGTACCATGTTCACCAGCGGCTACGCTGAGGCCAAACAGGAAAGGATCAG
CATCCAGGATGTGAGTGAGGTAGCCATGGCAACCATTCTGGACTACGCCT
ACACCGGCTGCCTTCAGACAGAGCCAGACCAGGTCCAGGCTGTGATGTCT
GCAGCCAGACTGCTCCAGGTGGGTTTTGTAGGCTGTAAAGCGGCAGAATA
CATGAAGGACTTATAAATGAACGTAACGAACGAGGACTACCCTAAGAGGG
TTCTCCGCGGGCTGAACAACCTGAGGAAGCGGGCTGAGCTGACAGATGTG
GTTCTGGAGGTGGAGGGGAGAAGTCCCTACTTCCGTACCATGTTCACCAG
CGGCTACGCTGAGGCCAAACAGGAAAGGATCAGCATCCAGGATGTGAGTG
AGGTAGCCATGGCAACCATTCTGGACTACGCCTACACCGGCTGCCTTCAG
ACAGAGCCAGACCAGGTCCAGGCTGTGATGTCTGCAGCCAGACTGCTCCA
GGTGGGTTTTGTAGGCTGTAAAGCGGCAGAATACATGAAGGACTTATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL95828gene:BL95828Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL95828_evm0-E1BL95828_evm0-E1-1564476830-350550Branchiostoma lanceolatumexon
BL95828_evm0-E2BL95828_evm0-E2-1564476830-350552Branchiostoma lanceolatumexon
BL95828_evm0-E3BL95828_evm0-E3-1564476830-350554Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL95828_evm0transcript:BL95828_evm0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000153genomeSc0000153:370996..372448 +
Properties
Property NameValue
Transcript idBL95828_evm0
Biotypeprotein_coding