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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95770_evm0 >transcript:BL95770_evm0-protein ID=transcript:BL95770_evm0-protein|Name=transcript:BL95770_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=286bp
MRLVILDDYDKASDWAARYIMNRILQFNPGPDKYFVMGLPTGSTPVGTYK
KLIEFHKAGQLSFRYVKTFNMDEYVAIPRDHPESYHSFMWANFFKHIDIL
PENAHILDGNAEDLEEECRQYEEKIKEAGGVELFLGGIGPDGHIAFNEPG
SSLVSRTRVKTLAKETIIANSRFFGGDLAKVPTMALTVGVGTVMDSREVM
ILITGAHKALALYKAIEEGVSHMWTVSAFQQHRKVIFVCDEDATLELKVK
TVKYFKGLMHVHNKLIEPMENGPDKKKRKVDEGYRD Run BLAST on NCBI mRNA from alignment at Sc0000115:84585..87485- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95770_evm0 ID=transcript:BL95770_evm0|Name=transcript:BL95770_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=2901bp|location=Sequence derived from alignment at Sc0000115:84585..87485- (Branchiostoma lanceolatum)
ATGCGTTTGGTTATCCTTGACGACTATGACAAGGCCAGTGACTGGGCGGC
CAGGTATATCATGAACAGGATCCTACAGTTCAACCCTGGTCCTGATAAGT
ACTTTGTCATGGGGCTACCTACAGGTTGGTAGAACTAGAAGTCATTTGAC
AATAAAGAAATTATAAAGCAGATTTTAAACTGTAGTTACCAACACAATAT
AGATTGGACAAATTTAATGGAAGCTATGTATAAAATTTGTTTCATAACTT
TTCCATGCATGGAAACCTGCCAGCCTGTTGCTGCTTAGTTGTAGGATTTG
TGTGCTAAACAGGGCAGGTAGAATTCCGAACTGACAGTTTGTCACCATAA
ACGTGACAACAGTGACACCCACTTATATTAAGCTTGCAATAAAATGTATT
ACGAGCCAACCAGCTGTAACTTGATATGACAATGTTATCTTAAAGTAAAC
ATAGCCTTTGGCAATGTAACAACCTTCACATTTAAGTAAAGACAAATTTG
CATAGTAGTCTACAGTTTGTGATGTGTCTGTTCATAAGTACATCTAAAAC
ACAATATGAACTTATATATGAGTAGAATTAACATATAAATATGATTACAC
TACAAAAAAGCTGTTACAAAATGTTTCAGTTTCTATCATTTTATCTTTAT
TTTTATTCACTTTTTTAATTCAGCAACTTAACTACTGACCCGTAAAAAAC
GTGTTTGACTGGTAATCTGGGTATGTTTTGCATATCAAAAAGGGCAAAGC
ATGATGTAGGTCATCAACTGAGGCCCCCATTCCACTAGACAGCTGTGAAA
AAACAACAGAACACACTACGCGTAAAAAGATTTGTTCTTTCTGTAATGTA
GTACATATAGATACACACATTTGTAACACATACATGTAGTTGACTTCCAT
TTCTTGTGACTGCACAGGTAGCACTCCAGTTGGAACATACAAGAAGCTGA
TAGAATTCCACAAAGCTGGGCAGCTGTCCTTCAGATACGTCAAGACTTTT
AATATGGACGAGTATGTGGGTAAGAAATGTTGCCCTTAATTTGGAATCCC
TACTGTTGTTGCTCACCTGACTTACATATTACTGTAAAGTCCAGTGTTTA
ATGCACTTGTCGAACTAGGGAAATTTTCTTGGTACATTGGACCTGTACAT
ACCTTGTATTTGTTCTTGTTACAACCAAAAATGCGCAACCAGATTTTTGG
AAGTGATTAATGGAGACATGCACTTGTTAATCAATACCTTATTCATTTAT
GTGCATAATTATTGAACTACAATAAACAAGAAATATGAAAAACTCTGAGG
CATGCGATCTTCAGTCTGTTGTTCCTGTCTGTCATAGCCACTTCAAGGAT
GGAAGTTGTACATTGAACCTATAGATGCCAATTTTCTTTTCTGTTGTAGC
CATACCTCGTGATCACCCTGAGAGCTACCACTCCTTCATGTGGGCAAACT
TCTTCAAACACATCGACATCCTGCCTGAGAACGCACACATTCTGGACGGC
AACGCTGAGGACTTGGAAGAGGAGTGCAGACAGTACGAGGAGAAAATTAA
AGAAGCCGGCGGAGTCGAACTGTTTCTTGGTGGTAAGTGAGGTGGAAATT
GTCCTTTAGGTCATGCATGCCAAGTTATCTCTTTGGCTCTACTTGACATT
TTAAGTAAGAATGAAGCAAGAGGTCAAGATGCAAATACAGTAGAAGGTTT
GGGGAGAACTTGCATCTGACTACGTTCAGGCTTTTTTTGTATGTCCGATA
ACCAACAAATAAGATCTTCTGTAGTTGAGACCTTGTGGTATCAGTGTCAC
CATTATCACTAAGGATTTTTTTAAATCTTGAAGAGGTATCTTGGACAGTT
TCAATACATTGTATTCTTGTTTCCTCAGGTATTGGTCCAGATGGCCACAT
TGCCTTCAACGAGCCTGGCTCCAGCCTTGTGTCCAGAACGCGAGTCAAGA
CGCTTGCAAAGGAGACCATCATTGCCAACTCTCGTTTCTTCGGTGGTGAC
TTGGCCAAAGTGCCCACCATGGCGCTCACGGTGGGCGTTGGCACTGTTAT
GGATTCTCGAGAGGTAGGATGGTTGTACCAATCAATTCAATCAATGACTC
ATTGGCTGCAATGTTGGAGTTTGATTGTCAGTTTGTAGGACTATAGGATA
AGAAAACGAACAAGGGCACACATCAATATGTTTTTGTCAAGAGAAATTCA
AAGTTCGTCATTCTTGTATAAATATTCCACTATACACTGGTGATAACTCT
TTCCTTGTGCCTTTTCTCTCCAGGTGATGATCCTGATCACAGGAGCCCAC
AAGGCCCTGGCCCTGTACAAGGCTATAGAGGAGGGTGTGAGCCACATGTG
GACGGTCTCTGCATTCCAACAACACAGAAAGGTCTCACTCATAGTCATAC
ATCTATAACATTTAAGCCACACCGATTTATTACCTTGGTACAGTACTTGG
ATATTTCTAAGTAAAAATCCAGAAAGAAGGCAACATGAAAACATAGAGCT
GGAAGAAAACCTTGGATTTGATATATTGTCTGTACCAATGTGTAGATTTC
TCCCAAGACTCTGTTTTCATGTTTTTCAGTTTCAGTTTGGCATTAATTAT
TTTTTTTTAATTTTAAAATCAGGGAACCAACGATTCAAATATTGTGACTT
TTCTCATGATCTGCATCTACGAAAGTTATGATCAACCTAATTTAGATTTC
TATCCTGACATGCTTGATTAAATGAAATTTTGTGCTCTGCAGGTCATCTT
TGTTTGCGATGAGGATGCAACCTTGGAGCTGAAGGTCAAGACGGTCAAGT
ACTTTAAGGGTTTGATGCACGTCCACAATAAGCTGATCGAGCCCATGGAG
AATGGACCTGACAAGAAGAAACGAAAAGTGGACGAAGGGTACAGGGATTG
A Coding sequence (CDS) from alignment at Sc0000115:84585..87485- >transcript:BL95770_evm0 ID=transcript:BL95770_evm0|Name=transcript:BL95770_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=5166bp|location=Sequence derived from alignment at Sc0000115:84585..87485- (Branchiostoma lanceolatum)
ATGCGTTTGGTTATCCTTGACGACTATGACAAGGCCAGTGACTGGGCGGC
CAGGTATATCATGAACAGGATCCTACAGTTCAACCCTGGTCCTGATAAGT
ACTTTGTCATGGGGCTACCTACAGGTAGCACTCCAGTTGGAACATACAAG
AAGCTGATAGAATTCCACAAAGCTGGGCAGCTGTCCTTCAGATACGTCAA
GACTTTTAATATGGACGAGTATGTGGCCATACCTCGTGATCACCCTGAGA
GCTACCACTCCTTCATGTGGGCAAACTTCTTCAAACACATCGACATCCTG
CCTGAGAACGCACACATTCTGGACGGCAACGCTGAGGACTTGGAAGAGGA
GTGCAGACAGTACGAGGAGAAAATTAAAGAAGCCGGCGGAGTCGAACTGT
TTCTTGGTGGTATTGGTCCAGATGGCCACATTGCCTTCAACGAGCCTGGC
TCCAGCCTTGTGTCCAGAACGCGAGTCAAGACGCTTGCAAAGGAGACCAT
CATTGCCAACTCTCGTTTCTTCGGTGGTGACTTGGCCAAAGTGCCCACCA
TGGCGCTCACGGTGGGCGTTGGCACTGTTATGGATTCTCGAGAGGTGATG
ATCCTGATCACAGGAGCCCACAAGGCCCTGGCCCTGTACAAGGCTATAGA
GGAGGGTGTGAGCCACATGTGGACGGTCTCTGCATTCCAACAACACAGAA
AGGTCATCTTTGTTTGCGATGAGGATGCAACCTTGGAGCTGAAGGTCAAG
ACGGTCAAGTACTTTAAGGGTTTGATGCACGTCCACAATAAGCTGATCGA
GCCCATGGAGAATGGACCTGACAAGAAGAAACGAAAAGTGGACGAAGGGT
ACAGGGATTGAATGCGTTTGGTTATCCTTGACGACTATGACAAGGCCAGT
GACTGGGCGGCCAGGTATATCATGAACAGGATCCTACAGTTCAACCCTGG
TCCTGATAAGTACTTTGTCATGGGGCTACCTACAGGTAGCACTCCAGTTG
GAACATACAAGAAGCTGATAGAATTCCACAAAGCTGGGCAGCTGTCCTTC
AGATACGTCAAGACTTTTAATATGGACGAGTATGTGGCCATACCTCGTGA
TCACCCTGAGAGCTACCACTCCTTCATGTGGGCAAACTTCTTCAAACACA
TCGACATCCTGCCTGAGAACGCACACATTCTGGACGGCAACGCTGAGGAC
TTGGAAGAGGAGTGCAGACAGTACGAGGAGAAAATTAAAGAAGCCGGCGG
AGTCGAACTGTTTCTTGGTGGTATTGGTCCAGATGGCCACATTGCCTTCA
ACGAGCCTGGCTCCAGCCTTGTGTCCAGAACGCGAGTCAAGACGCTTGCA
AAGGAGACCATCATTGCCAACTCTCGTTTCTTCGGTGGTGACTTGGCCAA
AGTGCCCACCATGGCGCTCACGGTGGGCGTTGGCACTGTTATGGATTCTC
GAGAGGTGATGATCCTGATCACAGGAGCCCACAAGGCCCTGGCCCTGTAC
AAGGCTATAGAGGAGGGTGTGAGCCACATGTGGACGGTCTCTGCATTCCA
ACAACACAGAAAGGTCATCTTTGTTTGCGATGAGGATGCAACCTTGGAGC
TGAAGGTCAAGACGGTCAAGTACTTTAAGGGTTTGATGCACGTCCACAAT
AAGCTGATCGAGCCCATGGAGAATGGACCTGACAAGAAGAAACGAAAAGT
GGACGAAGGGTACAGGGATTGAATGCGTTTGGTTATCCTTGACGACTATG
ACAAGGCCAGTGACTGGGCGGCCAGGTATATCATGAACAGGATCCTACAG
TTCAACCCTGGTCCTGATAAGTACTTTGTCATGGGGCTACCTACAGGTAG
CACTCCAGTTGGAACATACAAGAAGCTGATAGAATTCCACAAAGCTGGGC
AGCTGTCCTTCAGATACGTCAAGACTTTTAATATGGACGAGTATGTGGCC
ATACCTCGTGATCACCCTGAGAGCTACCACTCCTTCATGTGGGCAAACTT
CTTCAAACACATCGACATCCTGCCTGAGAACGCACACATTCTGGACGGCA
ACGCTGAGGACTTGGAAGAGGAGTGCAGACAGTACGAGGAGAAAATTAAA
GAAGCCGGCGGAGTCGAACTGTTTCTTGGTGGTATTGGTCCAGATGGCCA
CATTGCCTTCAACGAGCCTGGCTCCAGCCTTGTGTCCAGAACGCGAGTCA
AGACGCTTGCAAAGGAGACCATCATTGCCAACTCTCGTTTCTTCGGTGGT
GACTTGGCCAAAGTGCCCACCATGGCGCTCACGGTGGGCGTTGGCACTGT
TATGGATTCTCGAGAGGTGATGATCCTGATCACAGGAGCCCACAAGGCCC
TGGCCCTGTACAAGGCTATAGAGGAGGGTGTGAGCCACATGTGGACGGTC
TCTGCATTCCAACAACACAGAAAGGTCATCTTTGTTTGCGATGAGGATGC
AACCTTGGAGCTGAAGGTCAAGACGGTCAAGTACTTTAAGGGTTTGATGC
ACGTCCACAATAAGCTGATCGAGCCCATGGAGAATGGACCTGACAAGAAG
AAACGAAAAGTGGACGAAGGGTACAGGGATTGAATGCGTTTGGTTATCCT
TGACGACTATGACAAGGCCAGTGACTGGGCGGCCAGGTATATCATGAACA
GGATCCTACAGTTCAACCCTGGTCCTGATAAGTACTTTGTCATGGGGCTA
CCTACAGGTAGCACTCCAGTTGGAACATACAAGAAGCTGATAGAATTCCA
CAAAGCTGGGCAGCTGTCCTTCAGATACGTCAAGACTTTTAATATGGACG
AGTATGTGGCCATACCTCGTGATCACCCTGAGAGCTACCACTCCTTCATG
TGGGCAAACTTCTTCAAACACATCGACATCCTGCCTGAGAACGCACACAT
TCTGGACGGCAACGCTGAGGACTTGGAAGAGGAGTGCAGACAGTACGAGG
AGAAAATTAAAGAAGCCGGCGGAGTCGAACTGTTTCTTGGTGGTATTGGT
CCAGATGGCCACATTGCCTTCAACGAGCCTGGCTCCAGCCTTGTGTCCAG
AACGCGAGTCAAGACGCTTGCAAAGGAGACCATCATTGCCAACTCTCGTT
TCTTCGGTGGTGACTTGGCCAAAGTGCCCACCATGGCGCTCACGGTGGGC
GTTGGCACTGTTATGGATTCTCGAGAGGTGATGATCCTGATCACAGGAGC
CCACAAGGCCCTGGCCCTGTACAAGGCTATAGAGGAGGGTGTGAGCCACA
TGTGGACGGTCTCTGCATTCCAACAACACAGAAAGGTCATCTTTGTTTGC
GATGAGGATGCAACCTTGGAGCTGAAGGTCAAGACGGTCAAGTACTTTAA
GGGTTTGATGCACGTCCACAATAAGCTGATCGAGCCCATGGAGAATGGAC
CTGACAAGAAGAAACGAAAAGTGGACGAAGGGTACAGGGATTGAATGCGT
TTGGTTATCCTTGACGACTATGACAAGGCCAGTGACTGGGCGGCCAGGTA
TATCATGAACAGGATCCTACAGTTCAACCCTGGTCCTGATAAGTACTTTG
TCATGGGGCTACCTACAGGTAGCACTCCAGTTGGAACATACAAGAAGCTG
ATAGAATTCCACAAAGCTGGGCAGCTGTCCTTCAGATACGTCAAGACTTT
TAATATGGACGAGTATGTGGCCATACCTCGTGATCACCCTGAGAGCTACC
ACTCCTTCATGTGGGCAAACTTCTTCAAACACATCGACATCCTGCCTGAG
AACGCACACATTCTGGACGGCAACGCTGAGGACTTGGAAGAGGAGTGCAG
ACAGTACGAGGAGAAAATTAAAGAAGCCGGCGGAGTCGAACTGTTTCTTG
GTGGTATTGGTCCAGATGGCCACATTGCCTTCAACGAGCCTGGCTCCAGC
CTTGTGTCCAGAACGCGAGTCAAGACGCTTGCAAAGGAGACCATCATTGC
CAACTCTCGTTTCTTCGGTGGTGACTTGGCCAAAGTGCCCACCATGGCGC
TCACGGTGGGCGTTGGCACTGTTATGGATTCTCGAGAGGTGATGATCCTG
ATCACAGGAGCCCACAAGGCCCTGGCCCTGTACAAGGCTATAGAGGAGGG
TGTGAGCCACATGTGGACGGTCTCTGCATTCCAACAACACAGAAAGGTCA
TCTTTGTTTGCGATGAGGATGCAACCTTGGAGCTGAAGGTCAAGACGGTC
AAGTACTTTAAGGGTTTGATGCACGTCCACAATAAGCTGATCGAGCCCAT
GGAGAATGGACCTGACAAGAAGAAACGAAAAGTGGACGAAGGGTACAGGG
ATTGAATGCGTTTGGTTATCCTTGACGACTATGACAAGGCCAGTGACTGG
GCGGCCAGGTATATCATGAACAGGATCCTACAGTTCAACCCTGGTCCTGA
TAAGTACTTTGTCATGGGGCTACCTACAGGTAGCACTCCAGTTGGAACAT
ACAAGAAGCTGATAGAATTCCACAAAGCTGGGCAGCTGTCCTTCAGATAC
GTCAAGACTTTTAATATGGACGAGTATGTGGCCATACCTCGTGATCACCC
TGAGAGCTACCACTCCTTCATGTGGGCAAACTTCTTCAAACACATCGACA
TCCTGCCTGAGAACGCACACATTCTGGACGGCAACGCTGAGGACTTGGAA
GAGGAGTGCAGACAGTACGAGGAGAAAATTAAAGAAGCCGGCGGAGTCGA
ACTGTTTCTTGGTGGTATTGGTCCAGATGGCCACATTGCCTTCAACGAGC
CTGGCTCCAGCCTTGTGTCCAGAACGCGAGTCAAGACGCTTGCAAAGGAG
ACCATCATTGCCAACTCTCGTTTCTTCGGTGGTGACTTGGCCAAAGTGCC
CACCATGGCGCTCACGGTGGGCGTTGGCACTGTTATGGATTCTCGAGAGG
TGATGATCCTGATCACAGGAGCCCACAAGGCCCTGGCCCTGTACAAGGCT
ATAGAGGAGGGTGTGAGCCACATGTGGACGGTCTCTGCATTCCAACAACA
CAGAAAGGTCATCTTTGTTTGCGATGAGGATGCAACCTTGGAGCTGAAGG
TCAAGACGGTCAAGTACTTTAAGGGTTTGATGCACGTCCACAATAAGCTG
ATCGAGCCCATGGAGAATGGACCTGACAAGAAGAAACGAAAAGTGGACGA
AGGGTACAGGGATTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000115 | genome | Sc0000115:84585..87485 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95770_evm0 |
| Biotype | protein_coding |
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