transcript:BL95603_evm1 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL95603_evm1
Unique Nametranscript:BL95603_evm1
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL95603_evm1

>transcript:BL95603_evm1-protein ID=transcript:BL95603_evm1-protein|Name=transcript:BL95603_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=108bp
MGMLTRLGTAVGNIRSQECMKLIQEAIKTKLLRCCNPKCGKPGYRKTLKL
CGRCRMTRYCSRDCQAQHWMVGHKKCCGHDAYSRVEPDPFRNKHSMMMNL
LMAHLNQA
Run BLAST on NCBI

mRNA from alignment at Sc0000068:154411..156290-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL95603_evm1 ID=transcript:BL95603_evm1|Name=transcript:BL95603_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=1880bp|location=Sequence derived from alignment at Sc0000068:154411..156290- (Branchiostoma lanceolatum)
ATGGGCATGTTGACGCGGTGAGACTGCTGCTCCGCAAGGGGGCGTCTATG GTGAAAAGAGCGATTAATGGACTTGCTCCCCTTCATATAGCAGCGACCGA AGGTAGGTCAATTTAAAACAAAGACTTGTCCGTGAGGAAAAAATGCAAAA AGCAGCTCTTAACTAGAAATACATATGGATTTCGATTGCGAAATTTTCAC GGTGATATAATTCACACGTCTAGGATCACGGCCATCAAATAACGATAGTC CAGGCAAAGAAAGTGTAGGTACAGACTTAGACTGAATAGGTATATGTATT ACATGTCGTATGAAAAATAGGTGTACATCGTCAAATACGACGTGAAAAAT ATCTTGTTTATAACCTATTGCATGATTTTACAATTACATTGCATATTACG TCGTGGAATGTACTATCATTTTTATCTCCATGAAAAATGGAGACATTTGG GTGTGTAACTCTTGATGTTTGTTGGCGGGTGTTGTCAAGCCAAACATCAA GGTTGATTTGCCTGGTATGTGACCTTGGTACTGCAGCAGAACTTCCGTTT TTTAAAATCTTTTGGCCCGGACGTGCCATGGTATTGACTTTTTGGTGGCA GATAGCTGGTGATGTAAAAAAGAAGTGGTGTAGGTTTGGGCCCCCTAGCA GCTTGCTCTGGAACTGCAGGCGCGTTAATGTGAAAATCTTTTAAGGAGAA TAATTGAACAAAGGAACGACTGTTTTCCATGAAATTTAGTATGCAGGTAG TTTAGACTGAGATGTACATAATGCAGTGCACATTATGCCAATTGGGACTT AATTTGAATAACTAATGAGGAAAATCTATATTTGCAGTGTTTTCCGTAAT ACATGTGTTTTTATATGGATTCCTTGCATCGGCAATCCAACTTAGGGTGG ACAGAAGTGGTGGAGGTGCTGGTGTACCATGGTGCAACAGTAGACATCCG GGACATCTCCCAGAGCACACCACTCATTCATGCCTGTGGCTACAACCACG TCGACACAGTTCGGCGACTGATTGAGCTTGGAGCAAGACCTGATTTAGCA GACGGTTACATAGACCCGAGCCCAAGGCAAGTGATACATACTTTCACCAG AATGAACAATTGTTTCGTATGTATAACGTTATGCAAACATTGAAATAAAG CTGGACTTAATCAAATGGATCAGCACACAAAGACACACACACACACGCAC ACTCACTCACTCACTCACTCACTCACTCACTCACTCACTCACTCACTCAC TCACTCACTCACTCACTCACTCATTCATATAAGGTCATATAAGTAATATA TACATCTTCCCCTAGGTTGGGGACAGCAGTCGGAAACATTCGAAGTCAGG AGTGTATGAAGCTGATACAGGAGGCGATAAAGACCAAGTTGCTGAGATGC TGCAACCCAAAGTGTGGCAAACCAGGCTATAGGTATGTTTTCTCGGCTGA TTCAATTCATTTTACATTTTATCTATTTTTACTTTGTTTTAGAAGACAAG CATACTGTATCATCCGTTCATGTAGACATGCAATTGATGCAAATAGCATT GTCTCCAATTTCCTAAGCAATTGTGTTTCCATCTAGATTTCTTCAAGTCT TTGCAGAAAGGAAAATTGGAAAACATTTCTGGATGCTATGAAGTCCCTGT ATAGCTTGTACATGTATACCTGTTACATCCTCTACAGGAAAACCCTGAAG CTGTGTGGCCGATGCAGGATGACCCGCTACTGCAGCCGGGACTGCCAGGC ACAGCACTGGATGGTCGGACACAAGAAGTGCTGTGGGCATGACGCGTACT CTCGCGTTGAACCAGATCCCTTCAGAAATAAGCATTCGATGATGATGAAT CTACTCATGGCACATCTAAACCAAGCGTAA

Coding sequence (CDS) from alignment at Sc0000068:154411..156290-

>transcript:BL95603_evm1 ID=transcript:BL95603_evm1|Name=transcript:BL95603_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=981bp|location=Sequence derived from alignment at Sc0000068:154411..156290- (Branchiostoma lanceolatum)
ATGGGCATGTTGACGCGGTTGGGGACAGCAGTCGGAAACATTCGAAGTCA
GGAGTGTATGAAGCTGATACAGGAGGCGATAAAGACCAAGTTGCTGAGAT
GCTGCAACCCAAAGTGTGGCAAACCAGGCTATAGGAAAACCCTGAAGCTG
TGTGGCCGATGCAGGATGACCCGCTACTGCAGCCGGGACTGCCAGGCACA
GCACTGGATGGTCGGACACAAGAAGTGCTGTGGGCATGACGCGTACTCTC
GCGTTGAACCAGATCCCTTCAGAAATAAGCATTCGATGATGATGAATCTA
CTCATGGCACATCTAAACCAAGCGTAAATGGGCATGTTGACGCGGTTGGG
GACAGCAGTCGGAAACATTCGAAGTCAGGAGTGTATGAAGCTGATACAGG
AGGCGATAAAGACCAAGTTGCTGAGATGCTGCAACCCAAAGTGTGGCAAA
CCAGGCTATAGGAAAACCCTGAAGCTGTGTGGCCGATGCAGGATGACCCG
CTACTGCAGCCGGGACTGCCAGGCACAGCACTGGATGGTCGGACACAAGA
AGTGCTGTGGGCATGACGCGTACTCTCGCGTTGAACCAGATCCCTTCAGA
AATAAGCATTCGATGATGATGAATCTACTCATGGCACATCTAAACCAAGC
GTAAATGGGCATGTTGACGCGGTTGGGGACAGCAGTCGGAAACATTCGAA
GTCAGGAGTGTATGAAGCTGATACAGGAGGCGATAAAGACCAAGTTGCTG
AGATGCTGCAACCCAAAGTGTGGCAAACCAGGCTATAGGAAAACCCTGAA
GCTGTGTGGCCGATGCAGGATGACCCGCTACTGCAGCCGGGACTGCCAGG
CACAGCACTGGATGGTCGGACACAAGAAGTGCTGTGGGCATGACGCGTAC
TCTCGCGTTGAACCAGATCCCTTCAGAAATAAGCATTCGATGATGATGAA
TCTACTCATGGCACATCTAAACCAAGCGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL95603gene:BL95603Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL95603_evm1-E1BL95603_evm1-E1-1564476830-259533Branchiostoma lanceolatumexon
BL95603_evm1-E2BL95603_evm1-E2-1564476830-259531Branchiostoma lanceolatumexon
BL95603_evm1-E3BL95603_evm1-E3-1564476830-259529Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL95603_evm1transcript:BL95603_evm1-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000068genomeSc0000068:154411..156290 -
Properties
Property NameValue
Transcript idBL95603_evm1
Biotypeprotein_coding