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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95590_evm1 >transcript:BL95590_evm1-protein ID=transcript:BL95590_evm1-protein|Name=transcript:BL95590_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=344bp
MLQETDDTIHNIEGHAIMQRGDEGSIKVEAGWPKVKVEGDKQNPNLFSQH
FTNHKYGEEFSDSGLHSLPLGDTNGEDGREGQVPTDKEKAWLEQVERILN
GDEFDHPFVWNGSKNDSQHDTKQQEDEADNQPGCFQRNPKQFSLSRLVGS
FKNVMTKDGEIDTTKYANSQSELMKLLEMLGTVFSFVTSDAKSKIEILEA
YRASEQGEHYATIESMLQYEKDTGIVLDNKKPSGARTLLRLHRALKFIME
FMNRMGKSTSDAKVSTMAYECYHETLANYHVWIVRKAAGMAFYTLPTRKN
FLEKLCKEEEDVVLGLISELADTILPVYEQTEELYTKFDFHELP Run BLAST on NCBI mRNA from alignment at Sc0000067:946974..950648+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95590_evm1 ID=transcript:BL95590_evm1|Name=transcript:BL95590_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=3675bp|location=Sequence derived from alignment at Sc0000067:946974..950648+ (Branchiostoma lanceolatum)
ATGCTCCAAGAAACAGACGACACCATCCACAACATAGAGGGCCATGCCAT
TATGCAAAGAGGGGACGAAGGATCCATCAAAGTCGAGGCAGGGTGGCCCA
AAGTCAAGGTTGAAGGGGATAAACAAAACCCAAATCTATTTTCACAACAC
TTTACTAACCACAAATATGGGGAAGAGTTTTCAGACTCTGGTTTGCACAG
TCTGCCACTGGGTGATACCAACGGTGAGGATGGTAGGGAGGGGCAGGTAC
CTACTGACAAGGAAAAGGCATGGCTAGAACAAGTGGAGAGAATTCTAAAT
GGTGACGAATTTGACCATCCTTTTGTTTGGAATGGGTCTAAGGTGAGGTC
TTATTCTTTAACTCAATNTCGTCTGGAATCGGTCGCAGGTGAGGTCGTAC
TCTTTAACCCAATTTGACAACATTTTGGTGACCAACTTGATTGAATTAAA
AACCTCACCTTGAGCTTGAATCATACATTTTGCAATCATGAATCAACTCC
TGCTGAAATGACTATTGTAATCTCATTTGCAATATCGGCAAAACTGAAAT
GAGAAATATTTCCTAATTGATCAATGATTCATCATTACCTATGAATTCCA
CAGACCAATGCCATTGTAATACACTTTAAGTAATATACAATGTACTTGCG
ATCTAGCTTTCATCATTATACAACATAAATAATAAACATAAATCCAATCT
TGATTTCGGTAATGCAGTCTACCATCTAGGGTTCTTCTACTGATGACTAT
ATAATTATAAGTTATAACTAACAGAAGTATGGGTTTACTTAAGTGCTTCT
TTTACTAATAAGTACTATGTGCATGACATTTCCTGGGCCTGATAAGACAT
TTAAAATTCGGATTGGAGATTACAATAATGTCATCCCTATATTCAAAAAG
CAATCAAGTTCAATTTTCAATCTCATTCCAGAATGATTCACAACATGACA
CTAAACAGCAAGAGGATGAAGCCGACAACCAACCAGGCTGCTTTCAGAGA
AACCCCAAACAGTTCTCCCTGTCTCGGCTGGTCGGCAGCTTTAAGAACGT
GATGACGAAGGACGGCGAAATTGACACCACAAAATATGCAAACTCACAGT
CTGAACTCATGAAGTAAGTGTTTTATCCTGTTATGAATATACTATTTTGT
ATGTGTGTGTGTGTGTGTGTGTGTGATGACAAATTTGGTGTATCTAAATA
TTATTAATAAGTTCCATGTATCCATACTGCTCATAAAGTGTAAATACTAC
TGAAATTAACTTATGGCATACCACTGCCAGCTGGTACAACAAAAATATTA
ATAGATAAATACGAGTAAGTTTAATAAGTAAGTGTTCACAACAAATAATA
ACTGCCTTATCGCAGGAAGTGTTAGAATCCAAAACTAAACAAGTTTATAT
CCAGGTTTTCAAACATTGGTAGAATATGAAGCTAGTTGAGACCGGGCTAC
TACAGTCAGTGCCCCATTTCTCAAATATATATTAGTAGCACTATCAACTC
AGTAGGGTAGAAATTATGTTTATAACATCTTCATTTATGTTTATTCTATA
TTTATAAATGGATCAATTTCACAATCTTTTATTATAATGTAACAGCGCCA
ACAACTGACCAGCTCACCTCTTATGTTTCAATAATGATTAAATCATACAC
AAAAAAATATTGACAGCAAATAGTAAATCGCAAAACTTATGTTGATGTCC
AAAAATTATGTTGATGTGCACAGCACAGAGTTAGGTGACGCTATTTCCAA
AGCATGCATACGATTTGTGGCCCTCACTCACCCAGTGGAACAGCCTTGAT
TTCCGGCATTTTTGTGTGTGTGGAATCTCGGACTTGTCAGGACAGTGTGG
CTACTGCCCAGCGACAGTTGTCGTCTTCAAGAACGTCTTGAAACTGCAGC
GACAGAACCACATGCACCCATCACAAATCAGCAACATGGAGGAACAAACT
ACTATAACTGCAGGGGTGTCTTTTTTAGATTCTACAAAATACACTCCTAG
AAATTAATAATGATTAGATCTATAACATTAGATATAAGATCTATAACATT
AAATATATATCTAAGAGTTGGTAAGTTCAGATATATTTAATTTCATTGCC
TATTACAAACTTTGACAAAAAAACGAGAACTGTACCTACCTAAGAGTAAT
GAACTATTCTACATGAGGCTAAAGGTCAAACTTGCTAGCTTATATGTGAG
ACTTACTCTGATTGGTGGAAGGGGAAAAGGTATGGCCAATGGTTATACAG
GACACATTTTACCGGCACCCGGAAGAAAGACCAGCCAACATGGCAGATTC
TTCGGCACCTAGCGATGGAAAGTTTTCTCTTCCAATGGTTACAGAAGCCT
TTAAACAAATCAAGAAGGAGGACGGGGAGCTTGATCTGACTAAGTACAAT
GGCGCCTATAGAGATATCACAAAGTGAGTTTCTAAACGCGATTGTTACCG
GTGTATTTTAGAGATAAAAGACTCCCTACGCCTACGCTACACGAGTAACG
GTAGTTGCGTGAGCCGGCTTTTTCCGCCCCCCTCCCCATGGGAGTTGTTT
GTATGTATGAGTCATTCTGAAGCATAGTAAGATTGTAGACTATTGAAATA
AGCTTTTCGCGTTAATGCAAAATTAATTGATATTATTCTGATTTATTATA
GCACATATTGGATACTTTCGAAAGAGAAAGACAACACCAACAATCCTATT
AGTATTTAGCCTGAGTACCAACCTCCGTAGTGACCGCTGGCTCAAAAGAA
TTCGCTTGCTAACCACGGAGTCTGACCCTGCGCGTATCCGTAACGGCTGT
CTCATTATCACGTAATGAGGGGAATTCGAGCTGCGTTCGGTGCCATTTTT
CGTTCCAAGGTGTCTCTATTGCCCTGTTCGGGTCCAGTTTTGAAAGAATC
GCCATGGCAACAGTTCTTAGAACCTACCCGTTACGAAGAACAGTGTGGCA
TGGGGAGGAGCTTAGACGAATGGGGCCAATCAGCGAGCTCGTTCAAAATC
GAAACGAATATCTGACTAACAGCCGTGACGGATACGCGCAGGGTCAGACT
CCGTGGTTAGCAAGCGAATTCTTTTGAGCCAGCGGTCACTACGGAGGTTG
GTACTCAGGCTAATTAGTATTACTTCTAGTTGTAAATAACTAAATAAGGA
ATTCTCTTTTACAGGCTCTTGGAGATGCTCGGCACAGTTTTCTCTTTCGT
TACTTCGGATGCAAAATCGAAGATCGAGATTCTGGAAGCTTACCGAGCAT
CGGAGCAAGGCGAGCACTACGCCACCATCGAGTCGATGCTGCAGTACGAG
AAAGACACGGGTATTGTCTTGGACAACAAGAAACCGTCCGGCGCCAGGAC
GCTTTTACGTCTCCACCGTGCCCTCAAATTCATCATGGAGTTCATGAATA
GGATGGGGAAGAGCACCTCGGACGCCAAGGTCTCCACCATGGCGTACGAG
TGCTACCACGAAACCCTGGCGAATTATCACGTGTGGATCGTTCGGAAGGC
GGCCGGCATGGCGTTCTACACGCTGCCCACCAGGAAGAACTTTCTGGAGA
AGCTGTGCAAGGAGGAGGAGGATGTCGTCCTGGGGCTGATCTCCGAACTC
GCGGACACGATCCTTCCCGTGTACGAGCAGACGGAGGAGTTGTACACGAA
ATTTGACTTCCATGAGTTACCTTGA Coding sequence (CDS) from alignment at Sc0000067:946974..950648+ >transcript:BL95590_evm1 ID=transcript:BL95590_evm1|Name=transcript:BL95590_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=3105bp|location=Sequence derived from alignment at Sc0000067:946974..950648+ (Branchiostoma lanceolatum)
ATGCTCCAAGAAACAGACGACACCATCCACAACATAGAGGGCCATGCCAT
TATGCAAAGAGGGGACGAAGGATCCATCAAAGTCGAGGCAGGGTGGCCCA
AAGTCAAGGTTGAAGGGGATAAACAAAACCCAAATCTATTTTCACAACAC
TTTACTAACCACAAATATGGGGAAGAGTTTTCAGACTCTGGTTTGCACAG
TCTGCCACTGGGTGATACCAACGGTGAGGATGGTAGGGAGGGGCAGGTAC
CTACTGACAAGGAAAAGGCATGGCTAGAACAAGTGGAGAGAATTCTAAAT
GGTGACGAATTTGACCATCCTTTTGTTTGGAATGGGTCTAAGAATGATTC
ACAACATGACACTAAACAGCAAGAGGATGAAGCCGACAACCAACCAGGCT
GCTTTCAGAGAAACCCCAAACAGTTCTCCCTGTCTCGGCTGGTCGGCAGC
TTTAAGAACGTGATGACGAAGGACGGCGAAATTGACACCACAAAATATGC
AAACTCACAGTCTGAACTCATGAAGCTCTTGGAGATGCTCGGCACAGTTT
TCTCTTTCGTTACTTCGGATGCAAAATCGAAGATCGAGATTCTGGAAGCT
TACCGAGCATCGGAGCAAGGCGAGCACTACGCCACCATCGAGTCGATGCT
GCAGTACGAGAAAGACACGGGTATTGTCTTGGACAACAAGAAACCGTCCG
GCGCCAGGACGCTTTTACGTCTCCACCGTGCCCTCAAATTCATCATGGAG
TTCATGAATAGGATGGGGAAGAGCACCTCGGACGCCAAGGTCTCCACCAT
GGCGTACGAGTGCTACCACGAAACCCTGGCGAATTATCACGTGTGGATCG
TTCGGAAGGCGGCCGGCATGGCGTTCTACACGCTGCCCACCAGGAAGAAC
TTTCTGGAGAAGCTGTGCAAGGAGGAGGAGGATGTCGTCCTGGGGCTGAT
CTCCGAACTCGCGGACACGATCCTTCCCGTGTACGAGCAGACGGAGGAGT
TGTACACGAAATTTGACTTCCATGAGTTACCTTGAATGCTCCAAGAAACA
GACGACACCATCCACAACATAGAGGGCCATGCCATTATGCAAAGAGGGGA
CGAAGGATCCATCAAAGTCGAGGCAGGGTGGCCCAAAGTCAAGGTTGAAG
GGGATAAACAAAACCCAAATCTATTTTCACAACACTTTACTAACCACAAA
TATGGGGAAGAGTTTTCAGACTCTGGTTTGCACAGTCTGCCACTGGGTGA
TACCAACGGTGAGGATGGTAGGGAGGGGCAGGTACCTACTGACAAGGAAA
AGGCATGGCTAGAACAAGTGGAGAGAATTCTAAATGGTGACGAATTTGAC
CATCCTTTTGTTTGGAATGGGTCTAAGAATGATTCACAACATGACACTAA
ACAGCAAGAGGATGAAGCCGACAACCAACCAGGCTGCTTTCAGAGAAACC
CCAAACAGTTCTCCCTGTCTCGGCTGGTCGGCAGCTTTAAGAACGTGATG
ACGAAGGACGGCGAAATTGACACCACAAAATATGCAAACTCACAGTCTGA
ACTCATGAAGCTCTTGGAGATGCTCGGCACAGTTTTCTCTTTCGTTACTT
CGGATGCAAAATCGAAGATCGAGATTCTGGAAGCTTACCGAGCATCGGAG
CAAGGCGAGCACTACGCCACCATCGAGTCGATGCTGCAGTACGAGAAAGA
CACGGGTATTGTCTTGGACAACAAGAAACCGTCCGGCGCCAGGACGCTTT
TACGTCTCCACCGTGCCCTCAAATTCATCATGGAGTTCATGAATAGGATG
GGGAAGAGCACCTCGGACGCCAAGGTCTCCACCATGGCGTACGAGTGCTA
CCACGAAACCCTGGCGAATTATCACGTGTGGATCGTTCGGAAGGCGGCCG
GCATGGCGTTCTACACGCTGCCCACCAGGAAGAACTTTCTGGAGAAGCTG
TGCAAGGAGGAGGAGGATGTCGTCCTGGGGCTGATCTCCGAACTCGCGGA
CACGATCCTTCCCGTGTACGAGCAGACGGAGGAGTTGTACACGAAATTTG
ACTTCCATGAGTTACCTTGAATGCTCCAAGAAACAGACGACACCATCCAC
AACATAGAGGGCCATGCCATTATGCAAAGAGGGGACGAAGGATCCATCAA
AGTCGAGGCAGGGTGGCCCAAAGTCAAGGTTGAAGGGGATAAACAAAACC
CAAATCTATTTTCACAACACTTTACTAACCACAAATATGGGGAAGAGTTT
TCAGACTCTGGTTTGCACAGTCTGCCACTGGGTGATACCAACGGTGAGGA
TGGTAGGGAGGGGCAGGTACCTACTGACAAGGAAAAGGCATGGCTAGAAC
AAGTGGAGAGAATTCTAAATGGTGACGAATTTGACCATCCTTTTGTTTGG
AATGGGTCTAAGAATGATTCACAACATGACACTAAACAGCAAGAGGATGA
AGCCGACAACCAACCAGGCTGCTTTCAGAGAAACCCCAAACAGTTCTCCC
TGTCTCGGCTGGTCGGCAGCTTTAAGAACGTGATGACGAAGGACGGCGAA
ATTGACACCACAAAATATGCAAACTCACAGTCTGAACTCATGAAGCTCTT
GGAGATGCTCGGCACAGTTTTCTCTTTCGTTACTTCGGATGCAAAATCGA
AGATCGAGATTCTGGAAGCTTACCGAGCATCGGAGCAAGGCGAGCACTAC
GCCACCATCGAGTCGATGCTGCAGTACGAGAAAGACACGGGTATTGTCTT
GGACAACAAGAAACCGTCCGGCGCCAGGACGCTTTTACGTCTCCACCGTG
CCCTCAAATTCATCATGGAGTTCATGAATAGGATGGGGAAGAGCACCTCG
GACGCCAAGGTCTCCACCATGGCGTACGAGTGCTACCACGAAACCCTGGC
GAATTATCACGTGTGGATCGTTCGGAAGGCGGCCGGCATGGCGTTCTACA
CGCTGCCCACCAGGAAGAACTTTCTGGAGAAGCTGTGCAAGGAGGAGGAG
GATGTCGTCCTGGGGCTGATCTCCGAACTCGCGGACACGATCCTTCCCGT
GTACGAGCAGACGGAGGAGTTGTACACGAAATTTGACTTCCATGAGTTAC
CTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000067 | genome | Sc0000067:946974..950648 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95590_evm1 |
| Biotype | protein_coding |
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