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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95541_evm17 >transcript:BL95541_evm17-protein ID=transcript:BL95541_evm17-protein|Name=transcript:BL95541_evm17|organism=Branchiostoma lanceolatum|type=polypeptide|length=120bp
MPVTLNEGYEMTSWFDLYTLNIGGREDEAGIKKAAALVQGMVEEEEKGGI
PTNRIVLGGFSQGGALALYAAFTLEKPLAGMVALSSWLPLHESFPDVSET
RPYLVFQSFGRLFSSPIMTS Run BLAST on NCBI mRNA from alignment at Sc0000057:376496..382474+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95541_evm17 ID=transcript:BL95541_evm17|Name=transcript:BL95541_evm17|organism=Branchiostoma lanceolatum|type=mRNA|length=5979bp|location=Sequence derived from alignment at Sc0000057:376496..382474+ (Branchiostoma lanceolatum)
ATGCCCGTAACCCTGAATGAGGGTTATGAGATGACATCATGGTTCGACCT
GTACACTTTGAACATTGGCGGCCGGGAGGATGAAGCTGGGATCAAGAAAG
CAGCGGCTCTCGGTAAGACACTGCCAATGGAATTCATTAGTCACAAGTTG
GATCCCTGATATCAAATTTACACTTGTTGAACTTTGTACAGAAATTACAT
TCCACAAAGGAATGTGGGTAAAAGATAACGGTAAATGCATCAAGTTTGTG
TGGTTTTAATTTCGCAGTAGAAAGAAAATGGAGTGTTTGCAGTGGTTTTG
AGTTTGCGTTTTAGACAATAGTAGACAAGGAGGTAGGAGGGCAAAAAATG
TTTGTGGGGGTTTTAAGTTTGCGACAAAGAGCTTACTGCGTAAAACGTGA
ACATAAAACCACCACAAACATTTCTGCATTTACAGTATTCATAAGATCAC
GACCACCACTCGGCCCATCCAAGAGATCAATCACCGGAGTCCATTAGGCA
GGTGGCTGCTTTGACGTGGTTCTTCTCAGAGGCAATTTAGCCTTTTTTCC
TTGAGGTCTTATGACAGACTCCTTTGATTCCTTTCAAATGAAAACTGAGT
ACTTACGCCCAGGGATACCAGAATGGCAGAAGCTAATTGGTGGTTCTATG
GCCACAGTGTGATCATTAGTGAGGCTGTGCATCTTGAAGATAATGACTCC
TACGTTGATGAGAAAATTGAAGACTCTCTTATCATAGATCTGGTCCAATA
GTTGGGATGCTAATTCAAGGCCAGGGCTTTCTATGGGATCAAGCCTTAGG
CGTATCTTCCCTGGCCTTTAAGAGTAACAGTTACTATTTATCAAAATGTT
GGGCATGTTACTGACTAATTAGGTAAAACTTTTTCCCCGCAAACCTTACT
TAAACCCAAAAAATGTTAATGCCCAACTCACGTGCACTTGAATATACGCA
CAACAGTTGACAATTAACAAGTGGTATACCTTCTTACTGTGATCCAACAC
GTACATGCACATTCGTGTCTATTCAGAAGGGGATTGCCTTTGTCATACTT
TGCTCTTTGGATTGACTTTTTGGTTATATCCCCACCACTCTACAGTCTAT
AGATATATAGATAATCCCTACAGCATATACTGCATGTGAAATGGTGTTGC
GTTGTTCCAATAGGTCACTGTAGCTGACTGTCTTCGTCAAAAGATTTATG
GAGAGTCTTAGGAATATCTTTAAAGATACATAGGGACAAAGAATGTTCGT
ACAGTTGCTCCCTTCTGAGATTCTTAAATAGGAAAGCCTTGAGAAGTATC
TATCATTGTCTCCACATTTCCGGTGTGTTTGCCAAATCCATGGCCACAGC
CCATCCATTCCATGTGTAGATTTAGCCATCCATAAAGGTTGGTTGACAGT
TTTTTATCCGGGGCCTCCCTGATGGAGAAGAATCACCACTATTGTTGGCT
GTGCTCGGTATTCANAGCCATCCATAAAGGTCGGTTGACAGTTTTTTATC
CGGGGCCTCCCTGATGGAGAAGAATCACCACTATTGTTGGCTGTGCTCGG
TATTCAGAGTCAACAGGTGATGACGTCACTATGTGTTGCAGAGGGGGCTC
TGAATTCTACTTAAGCTGGGTGTAATAGAAAGATGTATGTACACGCCCAG
TGGCGTCGGGGTGGTGCAACAGTTAGAGCGTTTGGGCTCAGAACCAAACC
AACAGGTGCCAAGCTCTATACTCGCCATGCCCCGAATTTGTGCCCTTGGG
AAAGGCACTTAACACGATATTCCTACCATGGTGGTGGAGTGACGCCCACT
GAGCCTCTTGGCTGATCTGTCCAAAGTGTGAAAAAAACAACACATGGATT
AATTTTGTGCGTCAATGTGCTAGCATCTGCACATTTGCCACCAAGAACCG
TAGATTTTTTTAAATGTACACGGACATATTTACATGCACATTATCAGGCT
TGATAAGGCTGCTTTCCCAAGAAGTGTAATTTAGTACTCGTACATAAACT
GAGATACCGTACCTGTTACATTGAGGAAAGCTAATGAAAAATGATATTGC
TGCAAGTAATATTCTGCGTTGAAATGATGTATTGACCATGTTGTGATGGT
GACCCTACCCCTCACAGTACAGGGAATGGTGGAGGAGGAAGAGAAGGGGG
GCATCCCCACCAACCGGATCGTGCTGGGAGGGTTCTCCCAGGGGGGTGCG
CTTGCCCTGTACGCCGCCTTCACCCTGGAGAAGCCTCTGGCAGGCATGGT
AGCGCTGAGTTCCTGGCTGCCCCTTCATGAGTCCTTCCCAGACGTAAGTG
AAACACGGCCTTATCTTGTTTTTCAGTCGTTTGGCAGACTCTTCTCCAGT
CCTATAATGACCTCATAATTCTACGGTGTGTTTATACCACCTGTGCCGTG
CGGTAATGGCGTCGGTCCAAACACTGTTTTTGTGTTGATAGTTGGAAGGC
AGCTTTTACATACAATGGGAAGCTGTGTGAAAAGCGTGGATTTATCAGAG
TGCTTGTGTGTAATGGCTATCTAGCTGTAGCAGCAGGCTCTAACTGCACG
AGTGGTACACGTACATTTACACAGAGATTGGCAAGAAGAGGGCTCAGACC
AATTGGGAAACATATTGTTGAAAAGGAAGGTCAAAATGCCTCAGGCATAA
TTCTCAGACAGGTGATTTATATATGTGTGTATATCCTGGTTTGGAAAGCT
TGTCCAAGAATGTGGTTACCACTTAGATGTCAACATCAGATTCTGCTGAC
TTTCTTACCTAAGAGATGTAATCAGCTAATGTTCTATGCAAATCCTGCTC
AGGTACAAGATGGATAAGCACTTTTTGTCTGGGTTAAACCTACTTGTTTT
TGTTTTTTTATTGAGGTACCCATCAGGTGTTCATAGGATTTAGTGAAGTG
AGGCACAAGCACAAGCACTCAGGGAGTAAGCTTTTCATCCCTGACCTTTT
ATAGTAGCCTCAGTACTAGTTGCCAACAACAGTTGCACAGGCTTACGTGA
TCTACACCACAGTATATTTTTATCATGTTTGTTGACATGTAACCTCAAAG
GTGCAGTACATGAAAGGTCTTGTAACATTGCTATTCACTTAACCCATGTT
CTAGTCATATCACAAGTCTCGTAATATAATCATAATGTTCACTTCACCAG
GCCATGAAGGTTAACAATGAATCTCCCATCCTACAATGCCACGGAGACCT
GGACCCAGTTGTACCGTACAAGTTTGGCCAAATGACCAAGTCCGTCTTGT
CCAAGATGTGTAGCAATTACACCTTCAACACCTACCCCGGCATGATGCAC
AGCTCCAACGCAAAGGCAAGTGGAGAGGATGTATTGTACACATGCATCTG
TGTTTTTGTTTAATTCTAGTACTCATGGTGCATGTGACAACACAGACATT
TTGGCATGAATAGGACCTTACGTAAAACATTCTGAATCTGCATGTTGTCA
GTTTCATGTTCATGTAACCTGGTACATGTAGTCGAAAAATTGATGGTAAG
CATAGCGTTCCTCTCTCTGTCTTTGCTAAAACAGCCCTGGCTGACAAACG
GCCCAATTTTCTCTGTCTGTCTAACAAGCCTCCTGAGGCCAAGGTTGGGA
AGTTACATGTATCACCTGCAGGGCTGTCTCCAGGTTTCAATTTTTCTCCA
TTCTACTCAATGTTTGGGAGCCCATGTTGCTAGTTTTTGTCATTAAATCT
GTCATTTTTAGCTCGCAAAAATACATTTTCTTCAATTTCATGTCCTCAAG
GGAAGCTCCAATTTTTTTGACAGACAGACAGACAGGGTGAAATTTGTTTG
GTCCCAGCAATCAGCTTTTCTGGAGACAGCCTCGATTACCTGTAATACTT
GATCGTTGATGTTCCACAGTCCTGACATGCCATCTGTCTTCTTGCCTACA
GGAAATGCAGGATGTAAAAGAGTTCCTGGACAAAATACTGCCAGCAGTCT
GAGTTCTTCCCTCCAAGAGCTTTTAAACACTGGTTTATCTCAGGCCTTTG
TTGGAATTGTACACTTCCACCTCCTGGTGGTTATGATATAAAAGCTGTTT
GTGGTAACAGAAGGATTGTAGTTTACATATGGTCTTGGTTTCTGTTCATT
CTTGTGTAGTACAAATGGTGAGAGTTATGTAGGATCATATCATTATTTAA
CTGTGGCTGTCTTTGATAATATGTTGTGTTGTTGATATGTACTTCCAAGT
GCAAGTTTATTGATCAGACTAATTTGAGAACTGAGATTTTGTCCAAAATT
TTCAGAGAATTAATTATTGTGTTTCCTGTCAGTAGTATGTACTACCACTG
TAGTGTAGGTATAGTAGATGGAATAAACCTATTGTAAGTGAATTAAAGAT
GATGTACTATTAAAGATGACAATATAATGTTGATGGACTAGTATATATGG
GGAAGTAACATGTACAAACGTTCACTACCTTTAACCTGTAAAATACCTGG
AACAAGAGAGGATGTATGTTACAGGAAAAAGTAGTTACACCCCACATACA
TGGTAATTAAAGTTACATAGAAATGGTTGTCTACAACAGGCCTATATACA
TGTACGTTGTTTGTTTCCAAGCAGCTGTTGGGAGGGAACACAGTGATGAT
TACTGATTTCCAGTCAGAGGGCTGACAGTAAAACAAAACAGAGCGGCCAC
AAAATGTGAAGGATCTTCCCTCCCAGTAGCTGCTTGGAGATTACAAATGT
ACTTTGGAGATTGCACTGAAGCATGTGGCATGACAGTTACACATTGTGAG
TTGTACTCCCAGTTGTAGAGTAACTACTTCATGTTTGATAATACTAGTAC
TGACTGTAGGATGCATTCATCTGTAAGGCACACAGTTATTGTAACAATAG
CAGGACCCAATTGCAATAGCACAGCCTGTACAATAGTCTTCTTACAACAT
AACCTACTTTCTACTTGTACGGTAACGCAAACGCAACCTTCCACAGAGTC
CAACTTTTCACACAATCTCTTGTTTGTTGTTCATATGTCATACCAAGAAA
AAATGTCACTCGGTGTAGACTAATCTATACAACTGACTTTTACCCAGAGA
TGCACATAGCATAACTGTATGCTCACACAATTGTCTTATTCTTATACTTA
TTAATCCCCTAGGCAGCTACATAGTAAAATTGTAAAGCCATGCATCTACC
ATGTCTACTGTCAAAACAACAACTTACTCCAGAGAGGCCTCAAAATCATC
ACTGCTAGTTTTTCCTACTGTACTTCCCTACCAAAAAGAAGTACACTTAA
GAATGTAACCTCTGTAGAATTTAGTAATGTTAAAGAAAAGCCAGAGAACA
GCATTTGATATTATGACACACACATTTATATAATGTATGTTCTTGCTTGT
CGCTATACTTTGATTTATGAAGTACTATAGTGCATTACCCCGTATACTAG
AAAGAAGTACTTACAGTACAAAATCCATTGTAATCATTGATTGTTTTAAC
CACTAACACTTAAAGAAATGTTATAAAAGGGTAATGTGTGAGGCAGCTGG
TGTGAAGCCCTGCAATTATTGTGGTTATTTGGATAACCATTGTTCATCCT
TTTGTGTCTTTGGTGGTCACAAAGAAAGGTGGAAATGTGGTAAAGTCTGT
GATTCATGTTTGACAACATCAATATTAAGTATAGTAGATAATCTTTCAAG
GTTAGCATTATAAAACAATTTGTGTTTGCAGTATAACCTTGCAAAGTTAG
ATACTGGACCAGGCATTTTACTATTGAAAAATCCAAGATCTGTTCTTGGC
AGTCGATAAACTTAGAGGAAGTGGTCTAATTCTCTTTCTGTGTTTCTATT
TTTCTTCATTTCCTCTTCTTGCTCTTGCAAGGTAATCATAAGAGAACGAA
AGAAGCTTGATGGCCGTGAATCTATTATACATTGATGACGATAGAAGTTT
TCTGAGATCAGCAGTTGCCCACTGTTCTCATGAAATATTCACATTAACAA
CTGTATCAGGTACTATTGAAGCCAGGACA Coding sequence (CDS) from alignment at Sc0000057:376496..382474+ >transcript:BL95541_evm17 ID=transcript:BL95541_evm17|Name=transcript:BL95541_evm17|organism=Branchiostoma lanceolatum|type=CDS|length=726bp|location=Sequence derived from alignment at Sc0000057:376496..382474+ (Branchiostoma lanceolatum)
ATGCCCGTAACCCTGAATGAGGGTTATGAGATGACATCATGGTTCGACCT
GTACACTTTGAACATTGGCGGCCGGGAGGATGAAGCTGGGATCAAGAAAG
CAGCGGCTCTCGTACAGGGAATGGTGGAGGAGGAAGAGAAGGGGGGCATC
CCCACCAACCGGATCGTGCTGGGAGGGTTCTCCCAGGGGGGTGCGCTTGC
CCTGTACGCCGCCTTCACCCTGGAGAAGCCTCTGGCAGGCATGGTAGCGC
TGAGTTCCTGGCTGCCCCTTCATGAGTCCTTCCCAGACGTAAGTGAAACA
CGGCCTTATCTTGTTTTTCAGTCGTTTGGCAGACTCTTCTCCAGTCCTAT
AATGACCTCATAAATGCCCGTAACCCTGAATGAGGGTTATGAGATGACAT
CATGGTTCGACCTGTACACTTTGAACATTGGCGGCCGGGAGGATGAAGCT
GGGATCAAGAAAGCAGCGGCTCTCGTACAGGGAATGGTGGAGGAGGAAGA
GAAGGGGGGCATCCCCACCAACCGGATCGTGCTGGGAGGGTTCTCCCAGG
GGGGTGCGCTTGCCCTGTACGCCGCCTTCACCCTGGAGAAGCCTCTGGCA
GGCATGGTAGCGCTGAGTTCCTGGCTGCCCCTTCATGAGTCCTTCCCAGA
CGTAAGTGAAACACGGCCTTATCTTGTTTTTCAGTCGTTTGGCAGACTCT
TCTCCAGTCCTATAATGACCTCATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000057 | genome | Sc0000057:376496..382474 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95541_evm17 |
| Biotype | protein_coding |
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