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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95525_evm2 >transcript:BL95525_evm2-protein ID=transcript:BL95525_evm2-protein|Name=transcript:BL95525_evm2|organism=Branchiostoma lanceolatum|type=polypeptide|length=465bp
MASRSQKVQYRDRPPDGGWGWMVVFSSFLVHIVVVGSIKSFGVFYAAFRD
VFDEGAGDTAFINSTLVGMMLICSPIASALSKLTSCRVMVFTGGVLAAVG
FVISSFATSVMYLLVSLGIFTGFAMSLIYSPCLTMVGRYFDKRRATANGI
GLSGNGVGMFALSPLYQVLIDEFSYRGALLIIAGITLHGCICGALLRPIH
LREDQEHKAVLDQKKQNIVENSQSSCRMTASKVLHIFDVSLLTDVPFALF
TFSHFGTVLGYSIVFVHMAKHAQSIGVGKTEASFLISVMGITEFVFRLIG
GWFADLGVISRLHVYMIGVAGVGVCNLFVPFCSSYASLVVYMAFYGLFSG
VFHALITVLVREYTGVARLSSGIGWTFLGGGVAYLLGSPIAGWLYDVTGN
YNVSFYCSGAMVLASLSILFFEKCAKHNGPDGDTTEDNPTTLDISRESIE
GTVTEPMLTERETTV Run BLAST on NCBI mRNA from alignment at Sc0000054:1466703..1470089- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95525_evm2 ID=transcript:BL95525_evm2|Name=transcript:BL95525_evm2|organism=Branchiostoma lanceolatum|type=mRNA|length=3387bp|location=Sequence derived from alignment at Sc0000054:1466703..1470089- (Branchiostoma lanceolatum)
ATGGCTAGCAGGAGTCAGAAGGTGCAGTACCGGGACCGGCCTCCAGATGG
CGGTTGGGGTTGGATGGTGGTGTTCAGCAGTTTCCTGGTCCACATTGTCG
TGGTGGGGTCAATCAAGTCATTCGGGGTGTTCTACGCCGCGTTCCGAGAC
GTGTTTGACGAGGGCGCTGGAGACACCGCCTTCATCAACTCAACGCTGGT
GGGAATGATGCTGATTTGCTGTGAGAAAGAATTCAAATCTTTAACCTTTC
CCTGCTGCCTAACTCTGTAACCAATAGAGAATGGGGTGCCAAATGGCTAC
TTAAGTGTGCTAAAGGTTAAGTTCTCTGGAGCTGTTCATATTAGAGCAGT
AACAGTTATTGTATCATATCATCTCATCATATCATAGTGTTCGAATAAGA
GTCAGTATATTGCCAATAAGATCCTAGTGTTGTTAATTTTATTTTTGGAT
TAGAAGTTCGTAATAAATCAAATCCAAGCCTACACCTTTAAAGGTGCTGA
ACCCTAAGTTATGAACTAGGATACAAGGGAAATTGTTCAACACCTTTAGT
CATTAACAAGAAGCCACCGTATTTCTTGAAAAGTAAACAGTTATCCCCTG
GATAGACCCTAACCTTGATACTTTGAGATGTGCTTGAGATGTCCTCAAAC
ATGGGACCTATGGCTTTATGCCCCGTCCTTGTAGACGCCCCTAACCAAAC
TTAGGTACTCATTTTTACCTGATAGGGATTCGAATCCAGAACTTTCAGCT
TGAATTCTAAGTCAACATCCCAAATCACCATGGCCTGGGTAACATTCTCC
ATAGTAACTGCTGGCTTAGTCTGTATAATGCAAACTGCAGCTGTCCGGGG
GTTTTATGTCCACTGCCAGGCTGGCTGGTTACGGGCGGCTACTATAAGCC
TAATTAAATCAGGTTACCGCTGGCTCATTCTTTCTGCTTACTAATCTCTG
TGGTTAGCAAGCGAAAAGATTGAGCCAGCGGTAAAATTTACTATTGAGAA
TGGTACCCAGCCTGAGTACCAGCCTCCGTAGTGACCGCTAGCTCAAAAAA
ATTCGCTCGCTAACTTTCTTGAGTCAGCGGTCACTACAGAGGCTGGTACT
CAGGCTAACCCAGGCTAGAAACATCATGCACCATATGCCACCTGGAGTTA
AACTTCCTGCCTGTTTTATTTACTACAGCTCCCATTGCCAGCGCGCTGAG
TAAGCTGACCAGCTGTCGCGTGATGGTGTTTACCGGAGGAGTCCTGGCAG
CCGTCGGGTTCGTCATCAGCTCGTTCGCGACCAGCGTGATGTACCTACTG
GTCAGCCTGGGAATTTTCACAGGTAAAACAAGATTTCTAAGTTCCGGAAT
ATACTTAGTTGTTATACTTTCGGGTGTCCTGTATGTCTTGTTTGATTGTA
GTTCATTAATCATGCAAATAAGGTTTTGATTACTAGTAATATTACATGTG
TCTATTGATCACTTTCTGTCCATTCCATTCCATATTGTTTCCTTTTGTTC
CATTTCGTTCCATTTCATTCCATTTTGTTCTTCGGGACACCACTTTAAAA
GCTAATGATACATTTGCTTGATAGTTTCAATTTGCATGAGAAAAACAGTT
CAGTAGGACATACAATATGTCTCTCAGAACTAATAAGCTAGTTCAGAGTT
GTTACTACGCATGTGCAGTGTCAAAGGTGAAGGCCCCCGAGACCTGAATG
AAGCCAGTCCGGGCGTTGTTATGCAAATCTAGACAGTTGTTATTCAAATC
TAGACAATGTCCAGGCAAGCACTGTTTACAAGCCGGGGGCCTTCACCTTT
GACACTGCACATGCGTAGTAGCAACTCCGAACTAGCTAATACTGACAGTA
CTCAGATTTTGCCTTATTACTACTGTGTTCATATTAATGAGATTAGTTCC
TTAAAATTGTTAGATATAAGCATAGCATTAGCAATGTATTTAACTTGCCA
TACATTGTACCTGTTACAATCGCCATGCAATCTAATTCTTCTTCTTCTTC
TTTTATCATTTGTTTTCAGGGTTCGCAATGTCGTTGATTTACTCGCCATG
TCTGACAATGGTAGGACGTTACTTCGACAAGAGGAGAGCGACAGCAAACG
GAATCGGATTGTCAGGGAATGGGGTGGGAATGTTCGCCCTGTCACCTCTG
TATCAAGTCCTGATTGACGAGTTTAGTTATCGAGGTGCCCTGCTGATAAT
CGCTGGCATCACTCTGCACGGGTGCATCTGTGGGGCCTTACTGAGGCCGA
TACATCTCAGGGAAGACCAGGAACACAAAGCTGTTCTGGACCAGAAGAAG
CAAAACATAGTAGAAAATTCGCAGTCTTCATGCAGAATGACTGCTAGCAA
GGTCCTGCACATTTTTGATGTGTCGCTTTTGACGGACGTTCCCTTTGCGT
TGTTTACTTTCTCTCATTTCGGTACGGTGCTCGGTTACTCCATCGTATTT
GTCCACATGGCGAAACACGCGCAAAGCATCGGAGTTGGCAAAACCGAGGC
ATCATTTTTGATCTCGGTGATGGGGATTACCGAGTTTGTATTCCGGCTGA
TTGGAGGCTGGTTCGCAGACTTAGGAGTCATCAGTAGACTCCACGTCTAT
ATGATAGGAGTGGCTGGTGTGGGCGTGTGCAATCTATTCGTACCTTTCTG
TTCGTCGTATGCCTCCCTTGTAGTGTACATGGCCTTCTACGGGCTGTTCT
CCGGAGTGTTCCACGCCCTGATCACAGTGTTGGTCCGAGAGTACACGGGA
GTGGCCCGACTGTCCAGTGGGATCGGATGGACCTTCTTAGGAGGAGGAGT
GGCCTATCTACTGGGCTCACCTATCGCAGGTATGGCAGCTTTTCACAATA
ATTTAGTTTCTTGCTTTTTTAAAAATCCATACTTAATAAGGCATTCATCT
CTTCCCATCATACATAACTTATGAGTCTGCATGGGGGGCGGGGCACTATT
CAGTTACTGGATTATGAATGGTACATTTCTTTGTTATTCTTATGAAATTT
TACAAACCTTGTTTGGTTTTGTACTTACAAGAATGTGGTGCTAAGTATTT
TAGAAACTAAACTTAGCTAATCTGCTGTTGAGTAACCCTTTAAGATTTAT
ACTTGTAGCTCAAATTTTCCCAGTGTTTCCTGACTACAAATTTGTCCTTG
CCTCACAATCCAGGCTGGCTGTACGATGTCACGGGGAACTACAACGTCTC
GTTCTACTGCTCGGGCGCCATGGTCCTCGCGTCTCTCAGCATTCTCTTCT
TTGAGAAGTGTGCCAAACACAACGGGCCTGACGGAGATACCACGGAAGAC
AATCCTACAACACTAGACATAAGTAGAGAAAGTATAGAGGGAACGGTAAC
AGAGCCAATGCTCACAGAGAGGGAGACAACAGTATAG Coding sequence (CDS) from alignment at Sc0000054:1466703..1470089- >transcript:BL95525_evm2 ID=transcript:BL95525_evm2|Name=transcript:BL95525_evm2|organism=Branchiostoma lanceolatum|type=CDS|length=5592bp|location=Sequence derived from alignment at Sc0000054:1466703..1470089- (Branchiostoma lanceolatum)
ATGGCTAGCAGGAGTCAGAAGGTGCAGTACCGGGACCGGCCTCCAGATGG
CGGTTGGGGTTGGATGGTGGTGTTCAGCAGTTTCCTGGTCCACATTGTCG
TGGTGGGGTCAATCAAGTCATTCGGGGTGTTCTACGCCGCGTTCCGAGAC
GTGTTTGACGAGGGCGCTGGAGACACCGCCTTCATCAACTCAACGCTGGT
GGGAATGATGCTGATTTGCTCTCCCATTGCCAGCGCGCTGAGTAAGCTGA
CCAGCTGTCGCGTGATGGTGTTTACCGGAGGAGTCCTGGCAGCCGTCGGG
TTCGTCATCAGCTCGTTCGCGACCAGCGTGATGTACCTACTGGTCAGCCT
GGGAATTTTCACAGGGTTCGCAATGTCGTTGATTTACTCGCCATGTCTGA
CAATGGTAGGACGTTACTTCGACAAGAGGAGAGCGACAGCAAACGGAATC
GGATTGTCAGGGAATGGGGTGGGAATGTTCGCCCTGTCACCTCTGTATCA
AGTCCTGATTGACGAGTTTAGTTATCGAGGTGCCCTGCTGATAATCGCTG
GCATCACTCTGCACGGGTGCATCTGTGGGGCCTTACTGAGGCCGATACAT
CTCAGGGAAGACCAGGAACACAAAGCTGTTCTGGACCAGAAGAAGCAAAA
CATAGTAGAAAATTCGCAGTCTTCATGCAGAATGACTGCTAGCAAGGTCC
TGCACATTTTTGATGTGTCGCTTTTGACGGACGTTCCCTTTGCGTTGTTT
ACTTTCTCTCATTTCGGTACGGTGCTCGGTTACTCCATCGTATTTGTCCA
CATGGCGAAACACGCGCAAAGCATCGGAGTTGGCAAAACCGAGGCATCAT
TTTTGATCTCGGTGATGGGGATTACCGAGTTTGTATTCCGGCTGATTGGA
GGCTGGTTCGCAGACTTAGGAGTCATCAGTAGACTCCACGTCTATATGAT
AGGAGTGGCTGGTGTGGGCGTGTGCAATCTATTCGTACCTTTCTGTTCGT
CGTATGCCTCCCTTGTAGTGTACATGGCCTTCTACGGGCTGTTCTCCGGA
GTGTTCCACGCCCTGATCACAGTGTTGGTCCGAGAGTACACGGGAGTGGC
CCGACTGTCCAGTGGGATCGGATGGACCTTCTTAGGAGGAGGAGTGGCCT
ATCTACTGGGCTCACCTATCGCAGGCTGGCTGTACGATGTCACGGGGAAC
TACAACGTCTCGTTCTACTGCTCGGGCGCCATGGTCCTCGCGTCTCTCAG
CATTCTCTTCTTTGAGAAGTGTGCCAAACACAACGGGCCTGACGGAGATA
CCACGGAAGACAATCCTACAACACTAGACATAAGTAGAGAAAGTATAGAG
GGAACGGTAACAGAGCCAATGCTCACAGAGAGGGAGACAACAGTATAGAT
GGCTAGCAGGAGTCAGAAGGTGCAGTACCGGGACCGGCCTCCAGATGGCG
GTTGGGGTTGGATGGTGGTGTTCAGCAGTTTCCTGGTCCACATTGTCGTG
GTGGGGTCAATCAAGTCATTCGGGGTGTTCTACGCCGCGTTCCGAGACGT
GTTTGACGAGGGCGCTGGAGACACCGCCTTCATCAACTCAACGCTGGTGG
GAATGATGCTGATTTGCTCTCCCATTGCCAGCGCGCTGAGTAAGCTGACC
AGCTGTCGCGTGATGGTGTTTACCGGAGGAGTCCTGGCAGCCGTCGGGTT
CGTCATCAGCTCGTTCGCGACCAGCGTGATGTACCTACTGGTCAGCCTGG
GAATTTTCACAGGGTTCGCAATGTCGTTGATTTACTCGCCATGTCTGACA
ATGGTAGGACGTTACTTCGACAAGAGGAGAGCGACAGCAAACGGAATCGG
ATTGTCAGGGAATGGGGTGGGAATGTTCGCCCTGTCACCTCTGTATCAAG
TCCTGATTGACGAGTTTAGTTATCGAGGTGCCCTGCTGATAATCGCTGGC
ATCACTCTGCACGGGTGCATCTGTGGGGCCTTACTGAGGCCGATACATCT
CAGGGAAGACCAGGAACACAAAGCTGTTCTGGACCAGAAGAAGCAAAACA
TAGTAGAAAATTCGCAGTCTTCATGCAGAATGACTGCTAGCAAGGTCCTG
CACATTTTTGATGTGTCGCTTTTGACGGACGTTCCCTTTGCGTTGTTTAC
TTTCTCTCATTTCGGTACGGTGCTCGGTTACTCCATCGTATTTGTCCACA
TGGCGAAACACGCGCAAAGCATCGGAGTTGGCAAAACCGAGGCATCATTT
TTGATCTCGGTGATGGGGATTACCGAGTTTGTATTCCGGCTGATTGGAGG
CTGGTTCGCAGACTTAGGAGTCATCAGTAGACTCCACGTCTATATGATAG
GAGTGGCTGGTGTGGGCGTGTGCAATCTATTCGTACCTTTCTGTTCGTCG
TATGCCTCCCTTGTAGTGTACATGGCCTTCTACGGGCTGTTCTCCGGAGT
GTTCCACGCCCTGATCACAGTGTTGGTCCGAGAGTACACGGGAGTGGCCC
GACTGTCCAGTGGGATCGGATGGACCTTCTTAGGAGGAGGAGTGGCCTAT
CTACTGGGCTCACCTATCGCAGGCTGGCTGTACGATGTCACGGGGAACTA
CAACGTCTCGTTCTACTGCTCGGGCGCCATGGTCCTCGCGTCTCTCAGCA
TTCTCTTCTTTGAGAAGTGTGCCAAACACAACGGGCCTGACGGAGATACC
ACGGAAGACAATCCTACAACACTAGACATAAGTAGAGAAAGTATAGAGGG
AACGGTAACAGAGCCAATGCTCACAGAGAGGGAGACAACAGTATAGATGG
CTAGCAGGAGTCAGAAGGTGCAGTACCGGGACCGGCCTCCAGATGGCGGT
TGGGGTTGGATGGTGGTGTTCAGCAGTTTCCTGGTCCACATTGTCGTGGT
GGGGTCAATCAAGTCATTCGGGGTGTTCTACGCCGCGTTCCGAGACGTGT
TTGACGAGGGCGCTGGAGACACCGCCTTCATCAACTCAACGCTGGTGGGA
ATGATGCTGATTTGCTCTCCCATTGCCAGCGCGCTGAGTAAGCTGACCAG
CTGTCGCGTGATGGTGTTTACCGGAGGAGTCCTGGCAGCCGTCGGGTTCG
TCATCAGCTCGTTCGCGACCAGCGTGATGTACCTACTGGTCAGCCTGGGA
ATTTTCACAGGGTTCGCAATGTCGTTGATTTACTCGCCATGTCTGACAAT
GGTAGGACGTTACTTCGACAAGAGGAGAGCGACAGCAAACGGAATCGGAT
TGTCAGGGAATGGGGTGGGAATGTTCGCCCTGTCACCTCTGTATCAAGTC
CTGATTGACGAGTTTAGTTATCGAGGTGCCCTGCTGATAATCGCTGGCAT
CACTCTGCACGGGTGCATCTGTGGGGCCTTACTGAGGCCGATACATCTCA
GGGAAGACCAGGAACACAAAGCTGTTCTGGACCAGAAGAAGCAAAACATA
GTAGAAAATTCGCAGTCTTCATGCAGAATGACTGCTAGCAAGGTCCTGCA
CATTTTTGATGTGTCGCTTTTGACGGACGTTCCCTTTGCGTTGTTTACTT
TCTCTCATTTCGGTACGGTGCTCGGTTACTCCATCGTATTTGTCCACATG
GCGAAACACGCGCAAAGCATCGGAGTTGGCAAAACCGAGGCATCATTTTT
GATCTCGGTGATGGGGATTACCGAGTTTGTATTCCGGCTGATTGGAGGCT
GGTTCGCAGACTTAGGAGTCATCAGTAGACTCCACGTCTATATGATAGGA
GTGGCTGGTGTGGGCGTGTGCAATCTATTCGTACCTTTCTGTTCGTCGTA
TGCCTCCCTTGTAGTGTACATGGCCTTCTACGGGCTGTTCTCCGGAGTGT
TCCACGCCCTGATCACAGTGTTGGTCCGAGAGTACACGGGAGTGGCCCGA
CTGTCCAGTGGGATCGGATGGACCTTCTTAGGAGGAGGAGTGGCCTATCT
ACTGGGCTCACCTATCGCAGGCTGGCTGTACGATGTCACGGGGAACTACA
ACGTCTCGTTCTACTGCTCGGGCGCCATGGTCCTCGCGTCTCTCAGCATT
CTCTTCTTTGAGAAGTGTGCCAAACACAACGGGCCTGACGGAGATACCAC
GGAAGACAATCCTACAACACTAGACATAAGTAGAGAAAGTATAGAGGGAA
CGGTAACAGAGCCAATGCTCACAGAGAGGGAGACAACAGTATAGATGGCT
AGCAGGAGTCAGAAGGTGCAGTACCGGGACCGGCCTCCAGATGGCGGTTG
GGGTTGGATGGTGGTGTTCAGCAGTTTCCTGGTCCACATTGTCGTGGTGG
GGTCAATCAAGTCATTCGGGGTGTTCTACGCCGCGTTCCGAGACGTGTTT
GACGAGGGCGCTGGAGACACCGCCTTCATCAACTCAACGCTGGTGGGAAT
GATGCTGATTTGCTCTCCCATTGCCAGCGCGCTGAGTAAGCTGACCAGCT
GTCGCGTGATGGTGTTTACCGGAGGAGTCCTGGCAGCCGTCGGGTTCGTC
ATCAGCTCGTTCGCGACCAGCGTGATGTACCTACTGGTCAGCCTGGGAAT
TTTCACAGGGTTCGCAATGTCGTTGATTTACTCGCCATGTCTGACAATGG
TAGGACGTTACTTCGACAAGAGGAGAGCGACAGCAAACGGAATCGGATTG
TCAGGGAATGGGGTGGGAATGTTCGCCCTGTCACCTCTGTATCAAGTCCT
GATTGACGAGTTTAGTTATCGAGGTGCCCTGCTGATAATCGCTGGCATCA
CTCTGCACGGGTGCATCTGTGGGGCCTTACTGAGGCCGATACATCTCAGG
GAAGACCAGGAACACAAAGCTGTTCTGGACCAGAAGAAGCAAAACATAGT
AGAAAATTCGCAGTCTTCATGCAGAATGACTGCTAGCAAGGTCCTGCACA
TTTTTGATGTGTCGCTTTTGACGGACGTTCCCTTTGCGTTGTTTACTTTC
TCTCATTTCGGTACGGTGCTCGGTTACTCCATCGTATTTGTCCACATGGC
GAAACACGCGCAAAGCATCGGAGTTGGCAAAACCGAGGCATCATTTTTGA
TCTCGGTGATGGGGATTACCGAGTTTGTATTCCGGCTGATTGGAGGCTGG
TTCGCAGACTTAGGAGTCATCAGTAGACTCCACGTCTATATGATAGGAGT
GGCTGGTGTGGGCGTGTGCAATCTATTCGTACCTTTCTGTTCGTCGTATG
CCTCCCTTGTAGTGTACATGGCCTTCTACGGGCTGTTCTCCGGAGTGTTC
CACGCCCTGATCACAGTGTTGGTCCGAGAGTACACGGGAGTGGCCCGACT
GTCCAGTGGGATCGGATGGACCTTCTTAGGAGGAGGAGTGGCCTATCTAC
TGGGCTCACCTATCGCAGGCTGGCTGTACGATGTCACGGGGAACTACAAC
GTCTCGTTCTACTGCTCGGGCGCCATGGTCCTCGCGTCTCTCAGCATTCT
CTTCTTTGAGAAGTGTGCCAAACACAACGGGCCTGACGGAGATACCACGG
AAGACAATCCTACAACACTAGACATAAGTAGAGAAAGTATAGAGGGAACG
GTAACAGAGCCAATGCTCACAGAGAGGGAGACAACAGTATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000054 | genome | Sc0000054:1466703..1470089 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95525_evm2 |
| Biotype | protein_coding |
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