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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95262_evm0 >transcript:BL95262_evm0-protein ID=transcript:BL95262_evm0-protein|Name=transcript:BL95262_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=385bp
MIKYSIHHLKRVYPACFGRSFASKARVDTATATLVETRADWSGLPPVRLR
GRRYLVGSDSLGVPEFLQPPREGFPPVYVPAGGREFSPEDWAVAARGVSR
KFVDKSGVGAVLFRDMPLRTASDFSRFANNLSLKPMGYEGGVTSRGNVEN
NVDTASNEHPGINLEPHNEMAYTNYYPEKIIFYCQQPAGPGQGGETVMVD
VRETLRKLDSAVVGKFRKLGIRYCRYMPERGDFFHGYNSWKETFRTDSRD
DVERYLTSRGMTWQWGEDGSVSWWYNLPAMTLYKGEWLWFNQYHLNADFF
PTHPEYDSTRPVPPHRCPFNSQYGDGSEIEPEVLQHIRDVTWQSAVGFKM
RSRDVLMLNNMYIQHGRLGFTGDRRLFVYLAESNA Run BLAST on NCBI mRNA from alignment at Sc0000015:1059761..1062977- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95262_evm0 ID=transcript:BL95262_evm0|Name=transcript:BL95262_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=3217bp|location=Sequence derived from alignment at Sc0000015:1059761..1062977- (Branchiostoma lanceolatum)
ATGATCAAATATTCGATTCACCACCTGAAACGCGTCTATCCCGCATGTTT
CGGGCGTTCTTTCGCATCTAAAGCCCGCGTCGACACGGCCACAGCAACGC
TGGTGGAAACCAGAGCGGACTGGAGCGGCCTGCCGCCGGTCAGACTCCGG
GGGAGACGGTACCTGGTCGGCTCGGACAGCCTCGGCGTACCGGAGTTCCT
ACAGCCGCCGAGGGAGGGGTTCCCGCCCGTGTACGTCCCGGCGGGTGGCC
GTGAGTTCTCGCCCGAGGACTGGGCGGTAGCGGCCCGAGGGGTGTCGCGA
AAGTTCGTGGACAAGTCCGGCGTCGGTGCCGTGCTGTTTCGGGATATGCC
ACTGCGTACTGCCTCAGACTTCTCAAGGTAAACATGTTCAAGATTATAAC
ACTTCGGTAACGATGTTGTACATATTGCTTGATTTGCAGGTTTGACAATC
ATCTAACTCAGGGATTCTAAGTATTAAGTTCGTAGATTCAAAGGTGATTA
TCATATATTTAGGCCCCTGAGACGTAAACAAAACACGTCTGGGTATTGTT
ATGCAAAACAGGACAATGGTCGAACGAGAACTGTTTACAAGCCATTTAAG
GGCCCTCACCTTTGAGTTGACACTGCACATGCGTACTTGAATCTACGAAA
GAGCTTATTTCCGTGTGGTACTCAGCGTTCGCCATGTTGGTGATCAGAGA
AAGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAAAGAGGGAGAGAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATAATTGATTGA
CCAGCACAAAGAACCGTAAAACATTTTACTCTTTTCTTTGAAGGTTTGCC
AACAACCTGTCCCTGAAGCCCATGGGCTATGAAGGGGGAGTCACTAGCAG
AGGCAACGTCGAGAACAATGTGGACACCGCGAGTAACGAACATCCCGGCA
TAAACTTAGAACCGCACAACGAGATGGCCTACACCAACTACTACCCGGAA
AAGGTAAGCTGCGACTGGACACGGCATACTTATACACAGACAGGAGGTCA
CTCTGCACATGTTTGCAGCTAAAACTCACAATTCCCGTTGCCGCATTGGT
ATGTAACTTGGTATATCGATTGCTAGGTTTCGTGTGGTGATGCACGTTGT
CTATTTTACAATGTAACCGTGCTATACGATCACAGCAAGTATGGAAGCTA
TATACCCCGTATCTGCCTGAAGAGAGACTGTACAAGTGTGATTGAGTCCG
TTTGTTCCACAGATCATCTTCTACTGCCAGCAGCCTGCGGGGCCGGGGCA
GGGCGGGGAGACCGTCATGGTGGACGTGCGCGAGACCTTACGGAAACTGG
ACTCGGCTGTCGTCGGCAAGTTCCGGAAACTCGGAATCCGGTATTGCAGA
TACATGCCGGAAAGGGGAGACTTCTTTCACGGGTATAACTCCTGGAAAGA
GGTGAGTTTGATCCAAAAAAATGCACTCATTTAACCGACCGATTAGTATC
TAATAGCAGCTCAGAAAGGTCATGCCTTTAAGTCATATTGATGTGTTTAA
AAAATCGCATTTTCCGAGAACCATTATAGTAGAATGGAACTCGTTATCTT
CAAGAACTTTAGAAGCATCCGCACTAAATATCTTAAGAAAACGGTTGCCG
GCTATGTATAAACAGATACCTACTGTAGCCAAGGAGGTTATATAGCTGTA
GCCTACTTTTTTTTTTACCGCCTCCGACCACAGACCTTCCGCACGGACAG
TAGAGATGACGTGGAGAGGTACCTGACGTCACGAGGCATGACGTGGCAAT
GGGGGGAGGATGGGTCGGTCTCCTGGTGGTACAATCTACCCGCCATGACT
TTATATAAAGGTACGGCAATGTCATTGTAAACTCAGTGATATCCTTTACA
ATGTAACCTTCATTGACATTACCCACCATGTTACTCCAGCAAATCGTCTT
CTTTCTGATGACTTTTTTTACGAACTCACTCAGTGCAAAGCCATAGGGAG
CCACTCCCATAAGCACTGAACTGATTGTTACTGTATAGCAACATCTCTTC
GCCCTAGGTCAGAAACATCAATGCTCGAGACAAGCATGACTTCACTGGCC
AATTAGGAGATCGAGAAGCAGGGGTTACGAAGGCTGCTCGGGAAATTCCC
TACCCCATTTAGACCGGAATNATTCCCTACCCCATTTAGGCCGGAATGTT
TTTATTCACTCACATCGGGGCATGGCCCTACTCTTTTTCGAAAGATGTGG
TAGGTTCTTTTACGTGCTCAAGGTGTGACACTCCTCAAACACGGGACCTC
CATTGGACGTCGACCATTTAATTATGGAACTTTCTTCCTGACAAGGCTGT
TTCTCTCTCGAATCAAACCCACAAGAATTCAAAACCAAAGCTCACCACCA
TCTCCTAGCAGAGTCACCTCCGGCCACCAACTTAGTTAGTGTCAAGAAGC
GGTTTCTTGGCCTGGCATTGAGTAATCTTGTTAAAAGACAATTGTAATAG
GGAGAATCAGCTCTTTCTGATTCTTTTTATCGTCCCGCTCACAATTAAGT
GACACTCAACATATAAGATGGGTAAAGAACATTGTTTCAACAAATAAAAG
CTGAAGTCAAACTGAATGTATTTTTAGAATTCTCGGGTGTCAGAAGTATG
GAATCATTCTGATCAGCATTCTCGGCAACATTGTCGATGTCCTAACGTTT
GTGTTTGCTGTAGGAGAGTGGTTATGGTTTAATCAGTACCACTTGAACGC
AGACTTCTTCCCGACTCATCCCGAATACGACAGCACAAGACCTGTTCCAC
CACACAGGTGTCCATTCAACAGCCAATATGGCGACGGCTCGGAAATCGAA
CCGGAAGTACTACAGCACATACGGGATGTGACGTGGCAGGTGGGGTCAGA
TGTGTTCTACAGGAGAGTGACCTTAACTCTATCCTTTCATCGAATTCAAA
CTGTATTACACAAAATTTTGATGACCCAGTAAGTTATAATATTGTCTAGG
CATGTGTCATTAAAGATCCGCACTATGCTTTTTTGCAGTCCGCAGTCGGG
TTCAAGATGAGGAGTCGTGACGTCCTGATGCTGAACAACATGTACATCCA
ACATGGCCGCCTGGGCTTCACGGGAGACAGGAGACTGTTCGTGTATCTGG
CGGAGTCAAACGCCTGA Coding sequence (CDS) from alignment at Sc0000015:1059761..1062977- >transcript:BL95262_evm0 ID=transcript:BL95262_evm0|Name=transcript:BL95262_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=6948bp|location=Sequence derived from alignment at Sc0000015:1059761..1062977- (Branchiostoma lanceolatum)
ATGATCAAATATTCGATTCACCACCTGAAACGCGTCTATCCCGCATGTTT
CGGGCGTTCTTTCGCATCTAAAGCCCGCGTCGACACGGCCACAGCAACGC
TGGTGGAAACCAGAGCGGACTGGAGCGGCCTGCCGCCGGTCAGACTCCGG
GGGAGACGGTACCTGGTCGGCTCGGACAGCCTCGGCGTACCGGAGTTCCT
ACAGCCGCCGAGGGAGGGGTTCCCGCCCGTGTACGTCCCGGCGGGTGGCC
GTGAGTTCTCGCCCGAGGACTGGGCGGTAGCGGCCCGAGGGGTGTCGCGA
AAGTTCGTGGACAAGTCCGGCGTCGGTGCCGTGCTGTTTCGGGATATGCC
ACTGCGTACTGCCTCAGACTTCTCAAGGTTTGCCAACAACCTGTCCCTGA
AGCCCATGGGCTATGAAGGGGGAGTCACTAGCAGAGGCAACGTCGAGAAC
AATGTGGACACCGCGAGTAACGAACATCCCGGCATAAACTTAGAACCGCA
CAACGAGATGGCCTACACCAACTACTACCCGGAAAAGATCATCTTCTACT
GCCAGCAGCCTGCGGGGCCGGGGCAGGGCGGGGAGACCGTCATGGTGGAC
GTGCGCGAGACCTTACGGAAACTGGACTCGGCTGTCGTCGGCAAGTTCCG
GAAACTCGGAATCCGGTATTGCAGATACATGCCGGAAAGGGGAGACTTCT
TTCACGGGTATAACTCCTGGAAAGAGACCTTCCGCACGGACAGTAGAGAT
GACGTGGAGAGGTACCTGACGTCACGAGGCATGACGTGGCAATGGGGGGA
GGATGGGTCGGTCTCCTGGTGGTACAATCTACCCGCCATGACTTTATATA
AAGGAGAGTGGTTATGGTTTAATCAGTACCACTTGAACGCAGACTTCTTC
CCGACTCATCCCGAATACGACAGCACAAGACCTGTTCCACCACACAGGTG
TCCATTCAACAGCCAATATGGCGACGGCTCGGAAATCGAACCGGAAGTAC
TACAGCACATACGGGATGTGACGTGGCAGTCCGCAGTCGGGTTCAAGATG
AGGAGTCGTGACGTCCTGATGCTGAACAACATGTACATCCAACATGGCCG
CCTGGGCTTCACGGGAGACAGGAGACTGTTCGTGTATCTGGCGGAGTCAA
ACGCCTGAATGATCAAATATTCGATTCACCACCTGAAACGCGTCTATCCC
GCATGTTTCGGGCGTTCTTTCGCATCTAAAGCCCGCGTCGACACGGCCAC
AGCAACGCTGGTGGAAACCAGAGCGGACTGGAGCGGCCTGCCGCCGGTCA
GACTCCGGGGGAGACGGTACCTGGTCGGCTCGGACAGCCTCGGCGTACCG
GAGTTCCTACAGCCGCCGAGGGAGGGGTTCCCGCCCGTGTACGTCCCGGC
GGGTGGCCGTGAGTTCTCGCCCGAGGACTGGGCGGTAGCGGCCCGAGGGG
TGTCGCGAAAGTTCGTGGACAAGTCCGGCGTCGGTGCCGTGCTGTTTCGG
GATATGCCACTGCGTACTGCCTCAGACTTCTCAAGGTTTGCCAACAACCT
GTCCCTGAAGCCCATGGGCTATGAAGGGGGAGTCACTAGCAGAGGCAACG
TCGAGAACAATGTGGACACCGCGAGTAACGAACATCCCGGCATAAACTTA
GAACCGCACAACGAGATGGCCTACACCAACTACTACCCGGAAAAGATCAT
CTTCTACTGCCAGCAGCCTGCGGGGCCGGGGCAGGGCGGGGAGACCGTCA
TGGTGGACGTGCGCGAGACCTTACGGAAACTGGACTCGGCTGTCGTCGGC
AAGTTCCGGAAACTCGGAATCCGGTATTGCAGATACATGCCGGAAAGGGG
AGACTTCTTTCACGGGTATAACTCCTGGAAAGAGACCTTCCGCACGGACA
GTAGAGATGACGTGGAGAGGTACCTGACGTCACGAGGCATGACGTGGCAA
TGGGGGGAGGATGGGTCGGTCTCCTGGTGGTACAATCTACCCGCCATGAC
TTTATATAAAGGAGAGTGGTTATGGTTTAATCAGTACCACTTGAACGCAG
ACTTCTTCCCGACTCATCCCGAATACGACAGCACAAGACCTGTTCCACCA
CACAGGTGTCCATTCAACAGCCAATATGGCGACGGCTCGGAAATCGAACC
GGAAGTACTACAGCACATACGGGATGTGACGTGGCAGTCCGCAGTCGGGT
TCAAGATGAGGAGTCGTGACGTCCTGATGCTGAACAACATGTACATCCAA
CATGGCCGCCTGGGCTTCACGGGAGACAGGAGACTGTTCGTGTATCTGGC
GGAGTCAAACGCCTGAATGATCAAATATTCGATTCACCACCTGAAACGCG
TCTATCCCGCATGTTTCGGGCGTTCTTTCGCATCTAAAGCCCGCGTCGAC
ACGGCCACAGCAACGCTGGTGGAAACCAGAGCGGACTGGAGCGGCCTGCC
GCCGGTCAGACTCCGGGGGAGACGGTACCTGGTCGGCTCGGACAGCCTCG
GCGTACCGGAGTTCCTACAGCCGCCGAGGGAGGGGTTCCCGCCCGTGTAC
GTCCCGGCGGGTGGCCGTGAGTTCTCGCCCGAGGACTGGGCGGTAGCGGC
CCGAGGGGTGTCGCGAAAGTTCGTGGACAAGTCCGGCGTCGGTGCCGTGC
TGTTTCGGGATATGCCACTGCGTACTGCCTCAGACTTCTCAAGGTTTGCC
AACAACCTGTCCCTGAAGCCCATGGGCTATGAAGGGGGAGTCACTAGCAG
AGGCAACGTCGAGAACAATGTGGACACCGCGAGTAACGAACATCCCGGCA
TAAACTTAGAACCGCACAACGAGATGGCCTACACCAACTACTACCCGGAA
AAGATCATCTTCTACTGCCAGCAGCCTGCGGGGCCGGGGCAGGGCGGGGA
GACCGTCATGGTGGACGTGCGCGAGACCTTACGGAAACTGGACTCGGCTG
TCGTCGGCAAGTTCCGGAAACTCGGAATCCGGTATTGCAGATACATGCCG
GAAAGGGGAGACTTCTTTCACGGGTATAACTCCTGGAAAGAGACCTTCCG
CACGGACAGTAGAGATGACGTGGAGAGGTACCTGACGTCACGAGGCATGA
CGTGGCAATGGGGGGAGGATGGGTCGGTCTCCTGGTGGTACAATCTACCC
GCCATGACTTTATATAAAGGAGAGTGGTTATGGTTTAATCAGTACCACTT
GAACGCAGACTTCTTCCCGACTCATCCCGAATACGACAGCACAAGACCTG
TTCCACCACACAGGTGTCCATTCAACAGCCAATATGGCGACGGCTCGGAA
ATCGAACCGGAAGTACTACAGCACATACGGGATGTGACGTGGCAGTCCGC
AGTCGGGTTCAAGATGAGGAGTCGTGACGTCCTGATGCTGAACAACATGT
ACATCCAACATGGCCGCCTGGGCTTCACGGGAGACAGGAGACTGTTCGTG
TATCTGGCGGAGTCAAACGCCTGAATGATCAAATATTCGATTCACCACCT
GAAACGCGTCTATCCCGCATGTTTCGGGCGTTCTTTCGCATCTAAAGCCC
GCGTCGACACGGCCACAGCAACGCTGGTGGAAACCAGAGCGGACTGGAGC
GGCCTGCCGCCGGTCAGACTCCGGGGGAGACGGTACCTGGTCGGCTCGGA
CAGCCTCGGCGTACCGGAGTTCCTACAGCCGCCGAGGGAGGGGTTCCCGC
CCGTGTACGTCCCGGCGGGTGGCCGTGAGTTCTCGCCCGAGGACTGGGCG
GTAGCGGCCCGAGGGGTGTCGCGAAAGTTCGTGGACAAGTCCGGCGTCGG
TGCCGTGCTGTTTCGGGATATGCCACTGCGTACTGCCTCAGACTTCTCAA
GGTTTGCCAACAACCTGTCCCTGAAGCCCATGGGCTATGAAGGGGGAGTC
ACTAGCAGAGGCAACGTCGAGAACAATGTGGACACCGCGAGTAACGAACA
TCCCGGCATAAACTTAGAACCGCACAACGAGATGGCCTACACCAACTACT
ACCCGGAAAAGATCATCTTCTACTGCCAGCAGCCTGCGGGGCCGGGGCAG
GGCGGGGAGACCGTCATGGTGGACGTGCGCGAGACCTTACGGAAACTGGA
CTCGGCTGTCGTCGGCAAGTTCCGGAAACTCGGAATCCGGTATTGCAGAT
ACATGCCGGAAAGGGGAGACTTCTTTCACGGGTATAACTCCTGGAAAGAG
ACCTTCCGCACGGACAGTAGAGATGACGTGGAGAGGTACCTGACGTCACG
AGGCATGACGTGGCAATGGGGGGAGGATGGGTCGGTCTCCTGGTGGTACA
ATCTACCCGCCATGACTTTATATAAAGGAGAGTGGTTATGGTTTAATCAG
TACCACTTGAACGCAGACTTCTTCCCGACTCATCCCGAATACGACAGCAC
AAGACCTGTTCCACCACACAGGTGTCCATTCAACAGCCAATATGGCGACG
GCTCGGAAATCGAACCGGAAGTACTACAGCACATACGGGATGTGACGTGG
CAGTCCGCAGTCGGGTTCAAGATGAGGAGTCGTGACGTCCTGATGCTGAA
CAACATGTACATCCAACATGGCCGCCTGGGCTTCACGGGAGACAGGAGAC
TGTTCGTGTATCTGGCGGAGTCAAACGCCTGAATGATCAAATATTCGATT
CACCACCTGAAACGCGTCTATCCCGCATGTTTCGGGCGTTCTTTCGCATC
TAAAGCCCGCGTCGACACGGCCACAGCAACGCTGGTGGAAACCAGAGCGG
ACTGGAGCGGCCTGCCGCCGGTCAGACTCCGGGGGAGACGGTACCTGGTC
GGCTCGGACAGCCTCGGCGTACCGGAGTTCCTACAGCCGCCGAGGGAGGG
GTTCCCGCCCGTGTACGTCCCGGCGGGTGGCCGTGAGTTCTCGCCCGAGG
ACTGGGCGGTAGCGGCCCGAGGGGTGTCGCGAAAGTTCGTGGACAAGTCC
GGCGTCGGTGCCGTGCTGTTTCGGGATATGCCACTGCGTACTGCCTCAGA
CTTCTCAAGGTTTGCCAACAACCTGTCCCTGAAGCCCATGGGCTATGAAG
GGGGAGTCACTAGCAGAGGCAACGTCGAGAACAATGTGGACACCGCGAGT
AACGAACATCCCGGCATAAACTTAGAACCGCACAACGAGATGGCCTACAC
CAACTACTACCCGGAAAAGATCATCTTCTACTGCCAGCAGCCTGCGGGGC
CGGGGCAGGGCGGGGAGACCGTCATGGTGGACGTGCGCGAGACCTTACGG
AAACTGGACTCGGCTGTCGTCGGCAAGTTCCGGAAACTCGGAATCCGGTA
TTGCAGATACATGCCGGAAAGGGGAGACTTCTTTCACGGGTATAACTCCT
GGAAAGAGACCTTCCGCACGGACAGTAGAGATGACGTGGAGAGGTACCTG
ACGTCACGAGGCATGACGTGGCAATGGGGGGAGGATGGGTCGGTCTCCTG
GTGGTACAATCTACCCGCCATGACTTTATATAAAGGAGAGTGGTTATGGT
TTAATCAGTACCACTTGAACGCAGACTTCTTCCCGACTCATCCCGAATAC
GACAGCACAAGACCTGTTCCACCACACAGGTGTCCATTCAACAGCCAATA
TGGCGACGGCTCGGAAATCGAACCGGAAGTACTACAGCACATACGGGATG
TGACGTGGCAGTCCGCAGTCGGGTTCAAGATGAGGAGTCGTGACGTCCTG
ATGCTGAACAACATGTACATCCAACATGGCCGCCTGGGCTTCACGGGAGA
CAGGAGACTGTTCGTGTATCTGGCGGAGTCAAACGCCTGAATGATCAAAT
ATTCGATTCACCACCTGAAACGCGTCTATCCCGCATGTTTCGGGCGTTCT
TTCGCATCTAAAGCCCGCGTCGACACGGCCACAGCAACGCTGGTGGAAAC
CAGAGCGGACTGGAGCGGCCTGCCGCCGGTCAGACTCCGGGGGAGACGGT
ACCTGGTCGGCTCGGACAGCCTCGGCGTACCGGAGTTCCTACAGCCGCCG
AGGGAGGGGTTCCCGCCCGTGTACGTCCCGGCGGGTGGCCGTGAGTTCTC
GCCCGAGGACTGGGCGGTAGCGGCCCGAGGGGTGTCGCGAAAGTTCGTGG
ACAAGTCCGGCGTCGGTGCCGTGCTGTTTCGGGATATGCCACTGCGTACT
GCCTCAGACTTCTCAAGGTTTGCCAACAACCTGTCCCTGAAGCCCATGGG
CTATGAAGGGGGAGTCACTAGCAGAGGCAACGTCGAGAACAATGTGGACA
CCGCGAGTAACGAACATCCCGGCATAAACTTAGAACCGCACAACGAGATG
GCCTACACCAACTACTACCCGGAAAAGATCATCTTCTACTGCCAGCAGCC
TGCGGGGCCGGGGCAGGGCGGGGAGACCGTCATGGTGGACGTGCGCGAGA
CCTTACGGAAACTGGACTCGGCTGTCGTCGGCAAGTTCCGGAAACTCGGA
ATCCGGTATTGCAGATACATGCCGGAAAGGGGAGACTTCTTTCACGGGTA
TAACTCCTGGAAAGAGACCTTCCGCACGGACAGTAGAGATGACGTGGAGA
GGTACCTGACGTCACGAGGCATGACGTGGCAATGGGGGGAGGATGGGTCG
GTCTCCTGGTGGTACAATCTACCCGCCATGACTTTATATAAAGGAGAGTG
GTTATGGTTTAATCAGTACCACTTGAACGCAGACTTCTTCCCGACTCATC
CCGAATACGACAGCACAAGACCTGTTCCACCACACAGGTGTCCATTCAAC
AGCCAATATGGCGACGGCTCGGAAATCGAACCGGAAGTACTACAGCACAT
ACGGGATGTGACGTGGCAGTCCGCAGTCGGGTTCAAGATGAGGAGTCGTG
ACGTCCTGATGCTGAACAACATGTACATCCAACATGGCCGCCTGGGCTTC
ACGGGAGACAGGAGACTGTTCGTGTATCTGGCGGAGTCAAACGCCTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000015 | genome | Sc0000015:1059761..1062977 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95262_evm0 |
| Biotype | protein_coding |
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