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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95260_evm2 >transcript:BL95260_evm2-protein ID=transcript:BL95260_evm2-protein|Name=transcript:BL95260_evm2|organism=Branchiostoma lanceolatum|type=polypeptide|length=437bp
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFN
TFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAA
NNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFT
SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVNQVKIXFMVDNEAIYDICR
RNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPR
IHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMA
CCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP
GGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGME
EGEFSEAREDLAALEKDYEEVGVDSVDEEGEEEGEEY Run BLAST on NCBI mRNA from alignment at Sc0000015:4179424..4182142+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95260_evm2 ID=transcript:BL95260_evm2|Name=transcript:BL95260_evm2|organism=Branchiostoma lanceolatum|type=mRNA|length=2719bp|location=Sequence derived from alignment at Sc0000015:4179424..4182142+ (Branchiostoma lanceolatum)
ATGGTAAGTTCTGTTATATCCCACTATGTTTTAAAGAGATTTTTATCACA
TTCGGTGAACTTAGCGATGCTAAATATTACGATTATAGATAGTAATTTCC
GCCAAGCATCCACCCAGGGCCCAGGGCCCGGCTTGGCTGCAGGCATATTT
CTTCAGAAAGAAAGGAATTACTTTGGAAATGCTGTCAGTATCCCTTAATA
ATAGAATTAAGTTAAAATTCTTCACTTTACGGACGTTGGGTTAAGGTCAT
CACAAAATTCCTGTATCCTCCCGTCGTAGTGTATCAAAACGAATCGATAT
TTTTTCACCGGGAACCTCCTTTCCCAGATATGGCCTGTTCAAAATCATGT
GCAGATACGATTTTCAATATTCTTCTCTCTCTGTTTCCAGCGTGAGTGCA
TCTCTATCCACGTCGGCCAGGCTGGTGTCCAGATCGGTAACGCCTGCTGG
GAGCTGTACTGCTTGGAGCACGGGATCCAGCCTGATGGCCAGATGCCGAG
CGACAAGACCATCGGCGGCGGGGACGACTCCTTCAACACGTTCTTCAGCG
AGACTGGCGCCGGCAAACATGTGCCCCGTGCCGTCTTCGTGGATCTGGAG
CCCACCGTAGTCGGTGAGAACATTTTCAAAAAAAATCTGTTAAAAACGGT
CTAGATTCGAGTAATTTTTCATCATTTTGAAGTAATTTACCCGGGACTGT
CGGGTAGTTACTTTTTATTAGCATTAGCTGAAGTTTTATCTACAATGGAG
TTGAGGTGTGTTTTTTGTGTACTCCTTTATTTACTGTGTTGTTTCAGTAG
TCAGGAGTAACCGTTGATCCACATGTAATCTGTCAGTCCTGTGTAATCTG
TCAGGCCACCTGTAATTTGCATATGAATAGCAGGTTTTCATGCCCTATGC
CCAGGAGGCACAAACGGTTGTCACAGTAGAGAATTTTTAATCAGCCCAAA
CACAACTGGTTTACTTCACCCTATGTAGGGTACACAGAATCTNCATGGTA
GTTAAATTCAGTATCGCTCCCTGGTGAATCCTTGCACGGCACTTATCTGA
CGTCACCTAGAACAGCGTTTATTTTGCAAACAAAATGACATATGCATTAG
GTGTTACTTGGTGACCTATAGCACAAGTAAACAAACCCACACCTGTTTCC
TGGTGACCTCCACCAATCACGTGTCTTCCCGCCATTATGTGTCTCATAAT
CAGTGACATCCTGTCATGTGANTGTTTATCCCAGTATTATATTGTCTATA
CGTGGTTTCACTTTAATTTGTTAAACAGTGTGGAAACTGGAAAGGCTTTT
TTAAGTTCTTCGTCTAGTTGTCAAATGAAATTGATCTTATGTTTAATTAC
TTTATGTCCCAGTCTGCTTGTCATTCATGATCCTAAACTAATGTGATTGC
TTTCTGCTATTCCCCAGATGAGGTCCGTACCGGCACATACCGCCAGCTGT
TCCACCCCGAGCAGCTCATCACTGGTAAGGAGGATGCCGCCAACAACTAC
GCCCGTGGCCACTACACCATCGGCAAGGAGATCGTCGACTTGGTCCTGGA
CCGCATCCGTAAGCTGGCTGACCAGTGCACTGGTCTGCAGGGCTTCCTCA
TCTTCCACTCTTTCGGCGGTGGCACCGGCTCTGGCTTCACCTCCCTGTTG
ATGGAACGTCTGTCCGTCGACTACGGAAAGAAGTCCAAGCTTGAGTTCGC
CATCTACCCAGCCCCTCAGGTGTCCACAGCCGTGGTTGAGCCCTACAACT
CCATCCTGACAACNTCCCACTATGTTTTAAAGAGATTTTTATCACATTCG
GTGAACTTAGCGATGCTAAATATTACGATTATAGATAGAATTCCCGCCAA
GCATCCACCCAGGCCCAGGGCCCGGCTTGGCTGCAGGCATATTTCTTCAG
AAAGAAAGGAATTACTTTGGAAATGCTGTCAGTATCCTTTAATAATAGAA
TCAAGTTAAAATTNCCTTCATGGTCGACAACGAGGCCATCTACGACATCT
GCCGCCGTAACCTGGACATCGAGCGCCCGACCTACACCAACCTGAACCGT
CTGATCGGCCAGATCGTCTCCTCCATCACCGCATCCCTCCGCTTCGACGG
TGCCCTGAACGTGGATCTCACTGAGTTCCAGACCAACTTGGTGCCCTACC
CACGTATCCACTTCCCCCTGGCCACCTACGCCCCAGTCATCTCTGCCGAG
AAGGCCTACCACGAGCAGCTGTCCGTTGCTGAGATCACCAACGCCTGCTT
CGAGCCAGCCAACCAGATGGTGAAGTGCGATCCCCGTCACGGCAAGTACA
TGGCCTGCTGTATGCTGTACCGTGGAGATGTCGTGCCAAAGGACGTCAAC
GCTGCCATCGCCACCATCAAGACCAAGCGCACCATCCAGTTCGTCGACTG
GTGCCCCACCGGCTTCAAGGTCGGCATCAACTACCAGCCACCCACTGTGG
TGCCCGGCGGTGACTTGGCCAAGGTGCAGCGTGCCGTATGCATGTTGAGC
AACACCACCGCCATCGCTGAGGCCTGGGCCCGTCTCGACCACAAGTTCGA
TCTGATGTACGCCAAGCGTGCCTTCGTGCACTGGTACGTCGGTGAGGGTA
TGGAGGAGGGAGAGTTCTCTGAGGCCCGTGAAGATTTGGCCGCCCTGGAG
AAGGATTACGAGGAGGTCGGTGTTGACTCCGTGGATGAGGAGGGCGAAGA
GGAGGGAGAGGAGTATTAG Coding sequence (CDS) from alignment at Sc0000015:4179424..4182142+ >transcript:BL95260_evm2 ID=transcript:BL95260_evm2|Name=transcript:BL95260_evm2|organism=Branchiostoma lanceolatum|type=CDS|length=5256bp|location=Sequence derived from alignment at Sc0000015:4179424..4182142+ (Branchiostoma lanceolatum)
ATGCGTGAGTGCATCTCTATCCACGTCGGCCAGGCTGGTGTCCAGATCGG
TAACGCCTGCTGGGAGCTGTACTGCTTGGAGCACGGGATCCAGCCTGATG
GCCAGATGCCGAGCGACAAGACCATCGGCGGCGGGGACGACTCCTTCAAC
ACGTTCTTCAGCGAGACTGGCGCCGGCAAACATGTGCCCCGTGCCGTCTT
CGTGGATCTGGAGCCCACCGTAGTCGATGAGGTCCGTACCGGCACATACC
GCCAGCTGTTCCACCCCGAGCAGCTCATCACTGGTAAGGAGGATGCCGCC
AACAACTACGCCCGTGGCCACTACACCATCGGCAAGGAGATCGTCGACTT
GGTCCTGGACCGCATCCGTAAGCTGGCTGACCAGTGCACTGGTCTGCAGG
GCTTCCTCATCTTCCACTCTTTCGGCGGTGGCACCGGCTCTGGCTTCACC
TCCCTGTTGATGGAACGTCTGTCCGTCGACTACGGAAAGAAGTCCAAGCT
TGAGTTCGCCATCTACCCAGCCCCTCAGGTGTCCACAGCCGTGAATCAAG
TTAAAATTNCCTTCATGGTCGACAACGAGGCCATCTACGACATCTGCCGC
CGTAACCTGGACATCGAGCGCCCGACCTACACCAACCTGAACCGTCTGAT
CGGCCAGATCGTCTCCTCCATCACCGCATCCCTCCGCTTCGACGGTGCCC
TGAACGTGGATCTCACTGAGTTCCAGACCAACTTGGTGCCCTACCCACGT
ATCCACTTCCCCCTGGCCACCTACGCCCCAGTCATCTCTGCCGAGAAGGC
CTACCACGAGCAGCTGTCCGTTGCTGAGATCACCAACGCCTGCTTCGAGC
CAGCCAACCAGATGGTGAAGTGCGATCCCCGTCACGGCAAGTACATGGCC
TGCTGTATGCTGTACCGTGGAGATGTCGTGCCAAAGGACGTCAACGCTGC
CATCGCCACCATCAAGACCAAGCGCACCATCCAGTTCGTCGACTGGTGCC
CCACCGGCTTCAAGGTCGGCATCAACTACCAGCCACCCACTGTGGTGCCC
GGCGGTGACTTGGCCAAGGTGCAGCGTGCCGTATGCATGTTGAGCAACAC
CACCGCCATCGCTGAGGCCTGGGCCCGTCTCGACCACAAGTTCGATCTGA
TGTACGCCAAGCGTGCCTTCGTGCACTGGTACGTCGGTGAGGGTATGGAG
GAGGGAGAGTTCTCTGAGGCCCGTGAAGATTTGGCCGCCCTGGAGAAGGA
TTACGAGGAGGTCGGTGTTGACTCCGTGGATGAGGAGGGCGAAGAGGAGG
GAGAGGAGTATTAGATGCGTGAGTGCATCTCTATCCACGTCGGCCAGGCT
GGTGTCCAGATCGGTAACGCCTGCTGGGAGCTGTACTGCTTGGAGCACGG
GATCCAGCCTGATGGCCAGATGCCGAGCGACAAGACCATCGGCGGCGGGG
ACGACTCCTTCAACACGTTCTTCAGCGAGACTGGCGCCGGCAAACATGTG
CCCCGTGCCGTCTTCGTGGATCTGGAGCCCACCGTAGTCGATGAGGTCCG
TACCGGCACATACCGCCAGCTGTTCCACCCCGAGCAGCTCATCACTGGTA
AGGAGGATGCCGCCAACAACTACGCCCGTGGCCACTACACCATCGGCAAG
GAGATCGTCGACTTGGTCCTGGACCGCATCCGTAAGCTGGCTGACCAGTG
CACTGGTCTGCAGGGCTTCCTCATCTTCCACTCTTTCGGCGGTGGCACCG
GCTCTGGCTTCACCTCCCTGTTGATGGAACGTCTGTCCGTCGACTACGGA
AAGAAGTCCAAGCTTGAGTTCGCCATCTACCCAGCCCCTCAGGTGTCCAC
AGCCGTGAATCAAGTTAAAATTNCCTTCATGGTCGACAACGAGGCCATCT
ACGACATCTGCCGCCGTAACCTGGACATCGAGCGCCCGACCTACACCAAC
CTGAACCGTCTGATCGGCCAGATCGTCTCCTCCATCACCGCATCCCTCCG
CTTCGACGGTGCCCTGAACGTGGATCTCACTGAGTTCCAGACCAACTTGG
TGCCCTACCCACGTATCCACTTCCCCCTGGCCACCTACGCCCCAGTCATC
TCTGCCGAGAAGGCCTACCACGAGCAGCTGTCCGTTGCTGAGATCACCAA
CGCCTGCTTCGAGCCAGCCAACCAGATGGTGAAGTGCGATCCCCGTCACG
GCAAGTACATGGCCTGCTGTATGCTGTACCGTGGAGATGTCGTGCCAAAG
GACGTCAACGCTGCCATCGCCACCATCAAGACCAAGCGCACCATCCAGTT
CGTCGACTGGTGCCCCACCGGCTTCAAGGTCGGCATCAACTACCAGCCAC
CCACTGTGGTGCCCGGCGGTGACTTGGCCAAGGTGCAGCGTGCCGTATGC
ATGTTGAGCAACACCACCGCCATCGCTGAGGCCTGGGCCCGTCTCGACCA
CAAGTTCGATCTGATGTACGCCAAGCGTGCCTTCGTGCACTGGTACGTCG
GTGAGGGTATGGAGGAGGGAGAGTTCTCTGAGGCCCGTGAAGATTTGGCC
GCCCTGGAGAAGGATTACGAGGAGGTCGGTGTTGACTCCGTGGATGAGGA
GGGCGAAGAGGAGGGAGAGGAGTATTAGATGCGTGAGTGCATCTCTATCC
ACGTCGGCCAGGCTGGTGTCCAGATCGGTAACGCCTGCTGGGAGCTGTAC
TGCTTGGAGCACGGGATCCAGCCTGATGGCCAGATGCCGAGCGACAAGAC
CATCGGCGGCGGGGACGACTCCTTCAACACGTTCTTCAGCGAGACTGGCG
CCGGCAAACATGTGCCCCGTGCCGTCTTCGTGGATCTGGAGCCCACCGTA
GTCGATGAGGTCCGTACCGGCACATACCGCCAGCTGTTCCACCCCGAGCA
GCTCATCACTGGTAAGGAGGATGCCGCCAACAACTACGCCCGTGGCCACT
ACACCATCGGCAAGGAGATCGTCGACTTGGTCCTGGACCGCATCCGTAAG
CTGGCTGACCAGTGCACTGGTCTGCAGGGCTTCCTCATCTTCCACTCTTT
CGGCGGTGGCACCGGCTCTGGCTTCACCTCCCTGTTGATGGAACGTCTGT
CCGTCGACTACGGAAAGAAGTCCAAGCTTGAGTTCGCCATCTACCCAGCC
CCTCAGGTGTCCACAGCCGTGAATCAAGTTAAAATTNCCTTCATGGTCGA
CAACGAGGCCATCTACGACATCTGCCGCCGTAACCTGGACATCGAGCGCC
CGACCTACACCAACCTGAACCGTCTGATCGGCCAGATCGTCTCCTCCATC
ACCGCATCCCTCCGCTTCGACGGTGCCCTGAACGTGGATCTCACTGAGTT
CCAGACCAACTTGGTGCCCTACCCACGTATCCACTTCCCCCTGGCCACCT
ACGCCCCAGTCATCTCTGCCGAGAAGGCCTACCACGAGCAGCTGTCCGTT
GCTGAGATCACCAACGCCTGCTTCGAGCCAGCCAACCAGATGGTGAAGTG
CGATCCCCGTCACGGCAAGTACATGGCCTGCTGTATGCTGTACCGTGGAG
ATGTCGTGCCAAAGGACGTCAACGCTGCCATCGCCACCATCAAGACCAAG
CGCACCATCCAGTTCGTCGACTGGTGCCCCACCGGCTTCAAGGTCGGCAT
CAACTACCAGCCACCCACTGTGGTGCCCGGCGGTGACTTGGCCAAGGTGC
AGCGTGCCGTATGCATGTTGAGCAACACCACCGCCATCGCTGAGGCCTGG
GCCCGTCTCGACCACAAGTTCGATCTGATGTACGCCAAGCGTGCCTTCGT
GCACTGGTACGTCGGTGAGGGTATGGAGGAGGGAGAGTTCTCTGAGGCCC
GTGAAGATTTGGCCGCCCTGGAGAAGGATTACGAGGAGGTCGGTGTTGAC
TCCGTGGATGAGGAGGGCGAAGAGGAGGGAGAGGAGTATTAGATGCGTGA
GTGCATCTCTATCCACGTCGGCCAGGCTGGTGTCCAGATCGGTAACGCCT
GCTGGGAGCTGTACTGCTTGGAGCACGGGATCCAGCCTGATGGCCAGATG
CCGAGCGACAAGACCATCGGCGGCGGGGACGACTCCTTCAACACGTTCTT
CAGCGAGACTGGCGCCGGCAAACATGTGCCCCGTGCCGTCTTCGTGGATC
TGGAGCCCACCGTAGTCGATGAGGTCCGTACCGGCACATACCGCCAGCTG
TTCCACCCCGAGCAGCTCATCACTGGTAAGGAGGATGCCGCCAACAACTA
CGCCCGTGGCCACTACACCATCGGCAAGGAGATCGTCGACTTGGTCCTGG
ACCGCATCCGTAAGCTGGCTGACCAGTGCACTGGTCTGCAGGGCTTCCTC
ATCTTCCACTCTTTCGGCGGTGGCACCGGCTCTGGCTTCACCTCCCTGTT
GATGGAACGTCTGTCCGTCGACTACGGAAAGAAGTCCAAGCTTGAGTTCG
CCATCTACCCAGCCCCTCAGGTGTCCACAGCCGTGAATCAAGTTAAAATT
NCCTTCATGGTCGACAACGAGGCCATCTACGACATCTGCCGCCGTAACCT
GGACATCGAGCGCCCGACCTACACCAACCTGAACCGTCTGATCGGCCAGA
TCGTCTCCTCCATCACCGCATCCCTCCGCTTCGACGGTGCCCTGAACGTG
GATCTCACTGAGTTCCAGACCAACTTGGTGCCCTACCCACGTATCCACTT
CCCCCTGGCCACCTACGCCCCAGTCATCTCTGCCGAGAAGGCCTACCACG
AGCAGCTGTCCGTTGCTGAGATCACCAACGCCTGCTTCGAGCCAGCCAAC
CAGATGGTGAAGTGCGATCCCCGTCACGGCAAGTACATGGCCTGCTGTAT
GCTGTACCGTGGAGATGTCGTGCCAAAGGACGTCAACGCTGCCATCGCCA
CCATCAAGACCAAGCGCACCATCCAGTTCGTCGACTGGTGCCCCACCGGC
TTCAAGGTCGGCATCAACTACCAGCCACCCACTGTGGTGCCCGGCGGTGA
CTTGGCCAAGGTGCAGCGTGCCGTATGCATGTTGAGCAACACCACCGCCA
TCGCTGAGGCCTGGGCCCGTCTCGACCACAAGTTCGATCTGATGTACGCC
AAGCGTGCCTTCGTGCACTGGTACGTCGGTGAGGGTATGGAGGAGGGAGA
GTTCTCTGAGGCCCGTGAAGATTTGGCCGCCCTGGAGAAGGATTACGAGG
AGGTCGGTGTTGACTCCGTGGATGAGGAGGGCGAAGAGGAGGGAGAGGAG
TATTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000015 | genome | Sc0000015:4179424..4182142 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95260_evm2 |
| Biotype | protein_coding |
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