|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95230_evm0 >transcript:BL95230_evm0-protein ID=transcript:BL95230_evm0-protein|Name=transcript:BL95230_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=402bp
MTTTTEIAIPQSAEDIAPSWVQQVLQKDIPGVTITDVHVKGSISEGEGLM
SDIIAFDAEGTRNGTSQHYSLVAKLTNFKLPLTVMKQFPKDLHIKAETTE
VKFFSDAVPELLSVAIPSTERKSKPKAGNEDDEDNPPADSWFLPKCYFAA
TDPSSMVSIRVMENLKAQGFSIKPDRQPLSREEMMLAVEALAQVHGLSHQ
LEVRSGKPLPEKFDWIMTSSDPAVVMAAATLTYQYQNAVKGFAAAFPDQV
DLVARLEKLDPLLMIEEDPRPKVLCHGDCWLNNIMIKRVGDVPTDARLVD
WQTTKYKPPTSDLTLLFLCNTGWDVFHNHRDAILAHYHHKLQETLGPIES
SGLQNYTLEELKADFKADCLPGVINRFIHMVVLPADQNLLRIIQEIQKWG
VI Run BLAST on NCBI mRNA from alignment at Sc0000013:2526889..2529996+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95230_evm0 ID=transcript:BL95230_evm0|Name=transcript:BL95230_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=3108bp|location=Sequence derived from alignment at Sc0000013:2526889..2529996+ (Branchiostoma lanceolatum)
ATGACAACGACCACCGAGATCGCCATTCCGCAGTCTGCAGAAGACATCGC
CCCCTCCTGGGTGCAGCAGGTACTGCAGAAGGACATCCCGGGCGTCACCA
TCACCGACGTCCATGTGAAAGGATCCATCAGTGAAGGCGAGGGATTAATG
AGTGACATCATCGCCTTTGACGCCGAGGGGACAAGGAATGGTACAAGTCA
GCACTACAGTCTCGTTGCTAAGCTGACAAATTTCAAGCTGCCGTTGACTG
TAATGAAACAGTTTCCAAAAGACCTTCATATCAAAGCCGAGACGACTGAA
GTTAAGTTTTTCTCCGATGCTGTGCCAGAGCTCCTATCTGTGGCAATCCC
GAGCACAGAGCGCAAATCCAAGCCTAAGGCAGGGAATGAAGATGACGAAG
ACAACCCTCCCGCTGATTCCTGGTTCCTCCCAAAGTGCTACTTCGCCGCC
ACCGATCCAAGCTCCATGGTGTCCATCAGGGTTATGGAGAACCTGAAAGC
TCAGGGGTTCTCCATAAAACCCGACCGCCAACCGCTGAGCCGTGAGGAGA
TGATGCTGGCAGTCGAGGCCCTGGCGCAAGTACACGGCCTGTCACATCAG
CTGGAGGTCCGTTCGGGTAAACCCCTTCCTGAGAAGTTCGACTGGATCAT
GACTAGCTCAGATCCTGCAGTTGTGATGGCTGCAGCAACGTTAACCTACC
AATATCAGAACGCCGTGAAGGGATTCGCCGCAGCTTTTCCTGACCAGGTA
GATCTTGTAGCTCGTCTGGAAAAGTTAGACCCCTTGTTGATGATAGAGGA
GGACCCAAGACCTAAAGTGCTTTGCCATGGAGACTGTTGGCTCAATAACA
TCATGATCAAGGTAGGACATCACACTTATTTCTTCCTTGTTGAAATGTAA
ATATTGTGATTTCTTATTGTGTTTCGCTTGTTTAACTGCGGTCTTTGTCC
CAAACACAGCGCGTTGGAGATGTGCCCACTGACGCAAGGTTGGTGGACTG
GCAGACAACCAAATACAAGCCGCCAACCTCTGACCTGACGCTCCTATTTC
TTTGTAACACGGGCTGGGACGTCTTCCACAACCACAGGGACGCCATCCTG
GCCCACTATCACCACAAACTGCANAATGAGTGACATCATCGCCTTTGACG
CCGAGGGGACAAGGAATGGTACAAGTCAGCACTACAGTCTCGTTGCTAAA
CTGACAAATTTCAAGCTGCCGTTGACTGTAATGAAACAGTTTCCAAAAGA
CCTTCATATCAAAGCCGAGACGACTGAAGTTAAGTTTTTCTCCGATGCTG
TGCCAGAGCTCCTATCTGTGGCAATCCCGAGCACAGAGCGCAAATCCAAG
CCTAAGGCAGGGAATGAAGATGACGAAGACAACCCTCCCGCTGATTCCTG
GTTCCTCCCAAAGTGCTACTTCGCCGCCACCGATCCAAGCTCCATGGTGT
CCATCAGGGTTATGGAGAACCTGAAAGCTCAGGGGTTCTCCATAAAACCC
GACCGCCAACCGCTGAGCCGTGAGGAGATGATGCTGGCAGTCGAGGCCCT
GGCGCAAGTACACGGCCTGTCACATCAGCTGGAGGTCCGTTCGGGTAAAC
CCCTTCCTGAGAAGTTCGACTGGATCTTGACTAGCTCAGATCCTGCAGTT
GTGATGGCTGCAGCAACGTTAACCTACCAATATCAGAACGCCGTGAAGGG
ATTCGCCGCAGCTTTTCCTGACCAGGTAGATCTTGTAGCTCGTCTGGAAA
AGTTAGACCCCTTGTTGATGATAGAGGAGGACCCAAGACCTAAAGTGCTT
TGCCATGGAGACTGTTGGCTCAATAACATCATGATCAAGGTAGGACATCA
CACTTATTTCTTCCTTGTTGAAATGTAAATATTGTGATTTCTTATTGTGT
TTCGCTTGTTTAACTGCGGTCTTTGTCCCAAACACAGCGCGTTGGAGATG
TGCCCACTGACGCAAGGTTGGTGGACTGGCAGACAACCAAATACAAGCCG
CCAACCTCTGACCTGACGCTCCTATTTCTTTGTAACACGGGCTGGGACGT
CTTCCACAACCACAGGGACGCCATCCTGGCCCACTATCACCACAAACTGC
AGGAAACTCTGGGTCCAATCGGTGAGAATCTTCATAATACGTTACAAACT
GTTAGTTCCATTGGCCAGCGGATAAAAGACATTTACTTCCAAACGTGTCT
AAAAGAAATACATAACGACAACAAAGGTGGGGCTGCCAAAATTAAGTTAA
GATCATATAGAGTATTTAAAACTACATATAATGAAGAAAAATATTTAATA
AGTAATGCAAATATGAGGGACAGGAATGCAGTCACAAGATTAAGAATCAG
CTGCCACAAACTACATATTGAAACGGGAAAACATACCCGCACTCCTCTAG
AACAACGATTATGTGAACATTGTACTTTGAATAGAATAGAAGACGAATGT
CATTTTGTGGTAGAATGCAGATTATATACCCAATAATGTATGGAGGTGAT
AATGAATTGTATAAGCTTGTACAAAACCTATTTCCATACTCCACACATTT
AGGTACTGTACAAAAATTCATATTCCTAATGCGACTAGACAAACCTCCTA
TTGAAAAACATGTCTGTTCTGTTATATCTACCGTTACTATAACCGACAAG
CGAGAAGTAGAATTTATCTAAAGATAGTCATATTCTTTTTGTATCTGTTA
ACTGTACTTGTTATTTTGTTTTGTTGTGACCTGTACTTAGCCAAGTGTGG
CAAAAATATGCAATAAAGGTCTCAATTCATTATCACTATGTACACATTTA
CAGCAAAACGTTAAAGTTGGATGCTACGTGTTCTTTATTTTGTTTTTGCA
TTGTTGTAATGTTATTTACTCACCAATCAAGAAGAAGGAACATCGATGTG
TGGTTGTGATAGTACACGTTCAAACGGATACCATTTTCTTCCAGAATCCT
CTGGCCTACAAAACTACACGCTGGAAGAGTTGAAGGCCGACTTCAAAGCC
GACTGTCTGCCGGGGGTGATCAACCGTTTCATACACATGGTGGTCCTGCC
TGCCGACCAAAATCTACTGCGGATAATACAGGAGATCCAGAAGTGGGGGG
TCATCTAA Coding sequence (CDS) from alignment at Sc0000013:2526889..2529996+ >transcript:BL95230_evm0 ID=transcript:BL95230_evm0|Name=transcript:BL95230_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=3627bp|location=Sequence derived from alignment at Sc0000013:2526889..2529996+ (Branchiostoma lanceolatum)
ATGACAACGACCACCGAGATCGCCATTCCGCAGTCTGCAGAAGACATCGC
CCCCTCCTGGGTGCAGCAGGTACTGCAGAAGGACATCCCGGGCGTCACCA
TCACCGACGTCCATGTGAAAGGATCCATCAGTGAAGGCGAGGGATTAATG
AGTGACATCATCGCCTTTGACGCCGAGGGGACAAGGAATGGTACAAGTCA
GCACTACAGTCTCGTTGCTAAGCTGACAAATTTCAAGCTGCCGTTGACTG
TAATGAAACAGTTTCCAAAAGACCTTCATATCAAAGCCGAGACGACTGAA
GTTAAGTTTTTCTCCGATGCTGTGCCAGAGCTCCTATCTGTGGCAATCCC
GAGCACAGAGCGCAAATCCAAGCCTAAGGCAGGGAATGAAGATGACGAAG
ACAACCCTCCCGCTGATTCCTGGTTCCTCCCAAAGTGCTACTTCGCCGCC
ACCGATCCAAGCTCCATGGTGTCCATCAGGGTTATGGAGAACCTGAAAGC
TCAGGGGTTCTCCATAAAACCCGACCGCCAACCGCTGAGCCGTGAGGAGA
TGATGCTGGCAGTCGAGGCCCTGGCGCAAGTACACGGCCTGTCACATCAG
CTGGAGGTCCGTTCGGGTAAACCCCTTCCTGAGAAGTTCGACTGGATCAT
GACTAGCTCAGATCCTGCAGTTGTGATGGCTGCAGCAACGTTAACCTACC
AATATCAGAACGCCGTGAAGGGATTCGCCGCAGCTTTTCCTGACCAGGTA
GATCTTGTAGCTCGTCTGGAAAAGTTAGACCCCTTGTTGATGATAGAGGA
GGACCCAAGACCTAAAGTGCTTTGCCATGGAGACTGTTGGCTCAATAACA
TCATGATCAAGCGCGTTGGAGATGTGCCCACTGACGCAAGGTTGGTGGAC
TGGCAGACAACCAAATACAAGCCGCCAACCTCTGACCTGACGCTCCTATT
TCTTTGTAACACGGGCTGGGACGTCTTCCACAACCACAGGGACGCCATCC
TGGCCCACTATCACCACAAACTGCAGGAAACTCTGGGTCCAATCGAATCC
TCTGGCCTACAAAACTACACGCTGGAAGAGTTGAAGGCCGACTTCAAAGC
CGACTGTCTGCCGGGGGTGATCAACCGTTTCATACACATGGTGGTCCTGC
CTGCCGACCAAAATCTACTGCGGATAATACAGGAGATCCAGAAGTGGGGG
GTCATCTAAATGACAACGACCACCGAGATCGCCATTCCGCAGTCTGCAGA
AGACATCGCCCCCTCCTGGGTGCAGCAGGTACTGCAGAAGGACATCCCGG
GCGTCACCATCACCGACGTCCATGTGAAAGGATCCATCAGTGAAGGCGAG
GGATTAATGAGTGACATCATCGCCTTTGACGCCGAGGGGACAAGGAATGG
TACAAGTCAGCACTACAGTCTCGTTGCTAAGCTGACAAATTTCAAGCTGC
CGTTGACTGTAATGAAACAGTTTCCAAAAGACCTTCATATCAAAGCCGAG
ACGACTGAAGTTAAGTTTTTCTCCGATGCTGTGCCAGAGCTCCTATCTGT
GGCAATCCCGAGCACAGAGCGCAAATCCAAGCCTAAGGCAGGGAATGAAG
ATGACGAAGACAACCCTCCCGCTGATTCCTGGTTCCTCCCAAAGTGCTAC
TTCGCCGCCACCGATCCAAGCTCCATGGTGTCCATCAGGGTTATGGAGAA
CCTGAAAGCTCAGGGGTTCTCCATAAAACCCGACCGCCAACCGCTGAGCC
GTGAGGAGATGATGCTGGCAGTCGAGGCCCTGGCGCAAGTACACGGCCTG
TCACATCAGCTGGAGGTCCGTTCGGGTAAACCCCTTCCTGAGAAGTTCGA
CTGGATCATGACTAGCTCAGATCCTGCAGTTGTGATGGCTGCAGCAACGT
TAACCTACCAATATCAGAACGCCGTGAAGGGATTCGCCGCAGCTTTTCCT
GACCAGGTAGATCTTGTAGCTCGTCTGGAAAAGTTAGACCCCTTGTTGAT
GATAGAGGAGGACCCAAGACCTAAAGTGCTTTGCCATGGAGACTGTTGGC
TCAATAACATCATGATCAAGCGCGTTGGAGATGTGCCCACTGACGCAAGG
TTGGTGGACTGGCAGACAACCAAATACAAGCCGCCAACCTCTGACCTGAC
GCTCCTATTTCTTTGTAACACGGGCTGGGACGTCTTCCACAACCACAGGG
ACGCCATCCTGGCCCACTATCACCACAAACTGCAGGAAACTCTGGGTCCA
ATCGAATCCTCTGGCCTACAAAACTACACGCTGGAAGAGTTGAAGGCCGA
CTTCAAAGCCGACTGTCTGCCGGGGGTGATCAACCGTTTCATACACATGG
TGGTCCTGCCTGCCGACCAAAATCTACTGCGGATAATACAGGAGATCCAG
AAGTGGGGGGTCATCTAAATGACAACGACCACCGAGATCGCCATTCCGCA
GTCTGCAGAAGACATCGCCCCCTCCTGGGTGCAGCAGGTACTGCAGAAGG
ACATCCCGGGCGTCACCATCACCGACGTCCATGTGAAAGGATCCATCAGT
GAAGGCGAGGGATTAATGAGTGACATCATCGCCTTTGACGCCGAGGGGAC
AAGGAATGGTACAAGTCAGCACTACAGTCTCGTTGCTAAGCTGACAAATT
TCAAGCTGCCGTTGACTGTAATGAAACAGTTTCCAAAAGACCTTCATATC
AAAGCCGAGACGACTGAAGTTAAGTTTTTCTCCGATGCTGTGCCAGAGCT
CCTATCTGTGGCAATCCCGAGCACAGAGCGCAAATCCAAGCCTAAGGCAG
GGAATGAAGATGACGAAGACAACCCTCCCGCTGATTCCTGGTTCCTCCCA
AAGTGCTACTTCGCCGCCACCGATCCAAGCTCCATGGTGTCCATCAGGGT
TATGGAGAACCTGAAAGCTCAGGGGTTCTCCATAAAACCCGACCGCCAAC
CGCTGAGCCGTGAGGAGATGATGCTGGCAGTCGAGGCCCTGGCGCAAGTA
CACGGCCTGTCACATCAGCTGGAGGTCCGTTCGGGTAAACCCCTTCCTGA
GAAGTTCGACTGGATCATGACTAGCTCAGATCCTGCAGTTGTGATGGCTG
CAGCAACGTTAACCTACCAATATCAGAACGCCGTGAAGGGATTCGCCGCA
GCTTTTCCTGACCAGGTAGATCTTGTAGCTCGTCTGGAAAAGTTAGACCC
CTTGTTGATGATAGAGGAGGACCCAAGACCTAAAGTGCTTTGCCATGGAG
ACTGTTGGCTCAATAACATCATGATCAAGCGCGTTGGAGATGTGCCCACT
GACGCAAGGTTGGTGGACTGGCAGACAACCAAATACAAGCCGCCAACCTC
TGACCTGACGCTCCTATTTCTTTGTAACACGGGCTGGGACGTCTTCCACA
ACCACAGGGACGCCATCCTGGCCCACTATCACCACAAACTGCAGGAAACT
CTGGGTCCAATCGAATCCTCTGGCCTACAAAACTACACGCTGGAAGAGTT
GAAGGCCGACTTCAAAGCCGACTGTCTGCCGGGGGTGATCAACCGTTTCA
TACACATGGTGGTCCTGCCTGCCGACCAAAATCTACTGCGGATAATACAG
GAGATCCAGAAGTGGGGGGTCATCTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000013 | genome | Sc0000013:2526889..2529996 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95230_evm0 |
| Biotype | protein_coding |
|
