|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95124_evm0 >transcript:BL95124_evm0-protein ID=transcript:BL95124_evm0-protein|Name=transcript:BL95124_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=256bp
MSHEISPDRFDTVTKNVSGSNARTPGGIQRLNVGQRAPYAWLDTEPRPLH
LLSRFMAPKYKLSYFDMRARGEPTRMLFAAAGIEFEDDRISFDKWPSVKG
TTPMGQLPVLEVDGVKLCQSMPIARFVAKETGMAGKTNLEQAQADAFVDE
IIPVLPTLYNVALGSEEEKKAALAKGFDKTMETTLARCEKLCGSSGFLVG
NSLLWCDLVLHTVATNIENYKPGTMKNYPKLTKVMDSVNANPKIAAWIAK
RPDTSF Run BLAST on NCBI mRNA from alignment at Sc0000006:4900288..4905307+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95124_evm0 ID=transcript:BL95124_evm0|Name=transcript:BL95124_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=5020bp|location=Sequence derived from alignment at Sc0000006:4900288..4905307+ (Branchiostoma lanceolatum)
ATGTCCCACGAAATATCGCCCGACAGGTTTGATACTGTAACGAAGAACGT
GTCCGGGTCCAACGCACGCACACCTGGTGGCATTCAGCGTCTAAATGTGG
GTCAGAGGGCACCGTACGCATGGCTAGACACGGAGCCACGCCCACTCCAC
CTGTTGTCCAGATTGTTAGGTGCAAACAGGGAAAAGGAAAACATGTTTTA
ATCTCATTCCTTTGTTTGGAAACCCTTGTTCTGGAGATATAGAGCTCTGA
ATGCCACCAATGTGACTATGGACACCTTGTTAACGACATCACGAAATAAA
GCTTTCATTTGAAAGAGCATGCCACGTTGAAGATGAATGGAATTAGTTCC
AGACGGAAGAGTCCACTCAAAACACAAAAAAAGGGTCCATGTCCTAAAAA
AAGAGGCCCAAATTAAGTAGCCTCATTTTCTCCTTTTACTTTGAGGTAGC
TGCTATACTGTATGCTTTACTAAACTTACCCACCCACACATGCATGTTTT
GTTTAGAATAGGAACGTTAAAAGGATCATTATGCTTCCTTTACTGGTATC
ACCCCCTAAAACAAGTATCAAGTTCCTACCAGGAGTGCTGTGTCATTGTT
CGCTTGGTCTACATAAGTACACCTGCACCTGGCTTATGTAAATCTTGACG
TGTACATTGTTGTCTCGTCTGGTCCACACCACACGCCCATCCCGTACCCT
TCAGCATGGCGCCCAAGTACAAGCTGTCCTATTTCGACATGAGGGCTCGC
GGAGAGCCCACGAGAATGCTGTTCGCTGCCGCCGGGATAGAGTTTGAAGA
CGATAGGATCTCCTTCGACAAATGGCCGTCAGTGAAAGGGAGTAAGTATC
CATCTATCTATTGGTAAAATCTATATAATCTCCTCGGTAAAAGGTCACAA
GAAACATTACAGAGACAACCAAGCTAGGCACTGTGGGCAGGTTGTCGATG
CATCTCATTGAATACAGAACATAACATATAACATATGATAAGCCAAAAAT
AGTTACTCAAGCAACTGGATTATTTCAAAATTTTATCCAGTTGCTTGAGT
AACCATCTTTGACTTATCTTACTACCTGGATGTCTAACCTTCATCAACGT
ATAACGTATAATCTCCAAGCAGATGCAAGTATCCAGCTCATTCAGCTCAT
TCTTATTTGTCGGTACCCTCAATACTAGAGAACAGTAGCAATGCAGAATC
AGGCGTAAAATGAGAATGAGCCGTATCCTTACATCTGCTTGGAAATTATA
TACCATATGAAAATACACAAACACATGTAACAATGAGTAATAAGAGGCAA
TGCACGTTTCCCCACCTTTGTTACAATTTGAGGAAATTCCTTGCCCTGAA
CTGTTGATTGAATTGACAGGCGTCAACAACGTAATAATGATAATGGTTTA
TTGGTCAGAAATTACCCGTGCAATGGCAGCCAGTGCTGAATTGCTGCATG
TGTGTGCCTGTCTGTCTGTCTGTGTGTGTGTACTTATGGCTAATGATCAT
GTAACCACAGTTTAGAATGTTCTTCAAAGAAACTTTAGAAGACCTGATGA
TTGACTGTGCACCTCCTATTTCAGCGACCCCCATGGGCCAGCTGCCCGTA
CTGGAGNTGTGCACTTCCTATTTCAGCGACCCCCATGGGCCAGCTGCCCG
TGCTGGAGGTTGACGGCGTCAAGTTGTGCCAGAGCATGCCCATAGCTCGT
TTCGTGGCCAAGGAGACAGGTAAGCTTCAGCTTCAGTAACTGTTTCATAA
TGTACGGTATAACCTCACTCAAGCTAGCATTGAACAACGTCTGAAATTAG
GTTAGGTGTGATAGGTCCCCATGAGTTATGTATTAACTAGCAGGCACCAC
GTGCCTACGAAGCCGGTGTGTTACGTCGATAGGTGGATATAACTGCAATA
CAAACAAGAGTCTGAAGACTGGGCGGTTATACCGGCAATACAGATACAGA
TACAGAAGCTGGTGTGTTACGCCGGAGGGTGGTTATACCGGATGAGCAAT
ATAGATACATAACGACATGCTAACTACATAGAACAGCAGCTGTAGTCTCC
AAGAAGACTTCAGAGTGACTCAGCATAGCCAGTCCATCTAAAAAGTATAT
TTCCCTTTGTGGTGGAAACAACTGCTGGTTTGTTACGGCAGTGTCCACCA
ACACATGTGGGCTTCTGTTCTCATGAATAAAAGTCGCCGAGTCACATTTT
TCATTATTTGCACAAGCCTGAGGCGTGACGAAAGCAGGTGCATGGCTTGT
ATAACTCGTGAATAGACAACATCTGTTTTTCCTACGGCCTTTATTTACTT
TCTTAAGCTTTCCTTTACAATGAAAACATGTTTATGAGCCTTTTCATAGT
TTGCCGAGAATGTCACTGTATCACTGCCCTGTCAAGAATGAAAAGATCTG
AACACAAAATGATATTAGGGATATCTTGTCCATGAGCAAAGCAATGACTT
TCCATATACTTTCTAATACCATGTTTATCAAGATGAGCTACAATTAGGGG
TGGGTACCGGTACCGTGTACCGGTACAAAACCGGTATTTTTGTGTGGACC
GGTCCAAAAAATCGGTCCGGAAAAAATCAGTGGACTGGACTTTGGACCGA
TTAGAAAATTCACAGTACAAGACTACCAGCAGGCGGTCACATAATGAAAT
ATAATGATGTTATCGGTCTAAGAAAATAAAAAACAGCAGATTTAACGAGT
CGTGGTTGCTCTTTTTCGAAGATGTTAGCTGTGAATCTTATCTAGAAACA
CCTAAAGGGGGAGTCAACACACGGCGAGGCGAGAATAGTTAATTTCAATA
CAGTGCGAGGCTAAGAAATCATATCGTTCCAGACATGGCGTTATTGTCCG
ACACATGCATATGCTTGCAATCAAGTAAATCACTCTCCAAAATATGGTGT
ACTGCTACACTACTATGATCAGGTACAGGTTCAGGTCCGGACCTGGACCT
GACCCCCTGGACCTGGACCTGGCCTGAATTTTCTGTACCGGTACCCACCC
CTAGCTACAATAGGTCAATCTCCAAGCAGATCTTTCGGTGGCTATAAGTT
GGATACTGTTTTTGCCACCGTTAGATCAATAGGTTACCAACAAACCAGTA
GTCATAAACATATTTAAATTCATCCCTTTTTTTAGTTATCCTGTTTTAAA
GTTTTAAGTATCTACTACCTTTCTTCAGTGACACTGAGCAAGATCTGTCG
AACAGCAGAACTATGAATTGGTATGCTGTAAGTTACGTTTTAGACAATTC
TATCCAGTTGCTTCAGGAACTGCTATTTGGCATATCTTATTATACCTGGA
TTACCTGAAGCAGAACTTCCTTTTTTGTATCTTTTGACCTGGACGTGCTA
TGGTCTTGATTTTTGGGTGGCTGATAGCTTGTGATGTAATAACGAAGTAA
TGTAGGGTTGGGCCCCCTAGCAGCTTGCTCTAGAACTGCAGGGGCGTTAT
TGTGAAAATCTTCTAAGGAGAATAACGGAACAAAGGAACGACAGTTTTCT
ATGATATTTAGTATGCAGGTAGCTGGCATATCTTCTTATTCCTGGATGTC
TAACCTTCATCGATGATTCCCCCTACCTCTGCAGGAATGGCGGGTAAGAC
CAACCTGGAGCAGGCTCAGGCGGACGCCTTCGTGGACGAGATTATCCCAG
TCCTGCCCACACTGTACAACGTGGCACTCGGTTCTGAGGAGGAGAAAAAG
GTGCGCTATCTAGGTTCCAATTTTTGTTGTTGTAAACTGGCTACTGTTGT
ACAGAAAGAAACAAATGGAATGCCTTCCAACGTTTCTCTCCTCGGGTAAC
GTTAATTCTACATATCACTACTGCTCAAAGACCTGCTTTTCCTGATGCTA
AAGCCATACGGAAAAGTATCAAACTATAGTTAAGCACGACATTCTATTGT
CCTTTATGAAGTGTCTTATCTTGTCTTTGGTACTTCACAATAAAAAGTGC
GGACTCTGATTCCAGACACTTTGTTATTTACTTATCTATCAATTCACTGT
GCAACAATGAACCCCCTAGTCTCCCAAGAACACAACCACAAGAAGTTTGT
GGCGCTAAAGAAACATGATCCTCGTGGCAATAAATATGGTATCCTAACAA
TTCTACAAACTTATTCATTCATTCATTCATTTATTCGTTCATTCATTCAT
TCATTCATTCAACTGTACCGTCTTGCGTGGATTTCAGGCAGCCCTGGCCA
AAGGCTTTGACAAGACCATGGAGACCACACTGGCGAGGTGCGAGAAGCTG
TGCGGCTCCAGCGGGTTTCTCGTCGGGAACAGCGTAAGTATCATGGCAGG
GACTTATGGTATATGCTACTTCATAGCCTAGGAACTGAAGTGTTGTTTTT
GGCTTGTCATTCTGTATGTGTGCACTACTATAAGTTCTGCCACTGGGGCC
GGTGCAGTTTCTGTATGTCCTGCAAGAGGGGGTAACGTCTGCTATTACTG
ATAACTGCCTTGTTTTGTTTCATTATGTTTCGAAGCTCCCATAAAAAAAT
ACTGCTGTTGAAAGATAGTTTTGTTTAGGTGATTACAAGACTACAAACCG
TTAAAATCAACTACGCCCAGCTATGGAAAACACCATCAGGAACGCAACAC
GTCCTCCGCTCCATCTACTTCATATCTGAAATCTACTTTACTGTTTTTAT
ATTGTATTTTATTGATTCGAATTTAGTGTGCTAGTGTAATGTGTATCAGA
ATCGCTGNATTGTATTTTATTGATTCGAATTTAGTGTGCTAGTGTAATGT
GTATCAGAATAGCTGCCTCTTGCTCCCAATGCACTGTCTTGTTGCAATTT
CAATAAGCTTGAAAGTACAACATGTCCTCTTCCGTCCACCACCCCCCCCC
CCCAGCTCCTCTGGTGCGATCTGGTTCTTCACACCGTCGCGACTAACATC
GAGAACTACAAGCCGGGAACCATGAAGAACTACCCCAAACTCACCAAGGT
CATGGACAGCGTCAACGCCAACCCCAAAATCGCAGCGTGGATCGCCAAGC
GTCCGGACACCTCTTTCTAG Coding sequence (CDS) from alignment at Sc0000006:4900288..4905307+ >transcript:BL95124_evm0 ID=transcript:BL95124_evm0|Name=transcript:BL95124_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=4626bp|location=Sequence derived from alignment at Sc0000006:4900288..4905307+ (Branchiostoma lanceolatum)
ATGTCCCACGAAATATCGCCCGACAGGTTTGATACTGTAACGAAGAACGT
GTCCGGGTCCAACGCACGCACACCTGGTGGCATTCAGCGTCTAAATGTGG
GTCAGAGGGCACCGTACGCATGGCTAGACACGGAGCCACGCCCACTCCAC
CTGTTGTCCAGATTCATGGCGCCCAAGTACAAGCTGTCCTATTTCGACAT
GAGGGCTCGCGGAGAGCCCACGAGAATGCTGTTCGCTGCCGCCGGGATAG
AGTTTGAAGACGATAGGATCTCCTTCGACAAATGGCCGTCAGTGAAAGGG
ACGACCCCCATGGGCCAGCTGCCCGTGCTGGAGGTTGACGGCGTCAAGTT
GTGCCAGAGCATGCCCATAGCTCGTTTCGTGGCCAAGGAGACAGGAATGG
CGGGTAAGACCAACCTGGAGCAGGCTCAGGCGGACGCCTTCGTGGACGAG
ATTATCCCAGTCCTGCCCACACTGTACAACGTGGCACTCGGTTCTGAGGA
GGAGAAAAAGGCAGCCCTGGCCAAAGGCTTTGACAAGACCATGGAGACCA
CACTGGCGAGGTGCGAGAAGCTGTGCGGCTCCAGCGGGTTTCTCGTCGGG
AACAGCCTCCTCTGGTGCGATCTGGTTCTTCACACCGTCGCGACTAACAT
CGAGAACTACAAGCCGGGAACCATGAAGAACTACCCCAAACTCACCAAGG
TCATGGACAGCGTCAACGCCAACCCCAAAATCGCAGCGTGGATCGCCAAG
CGTCCGGACACCTCTTTCTAGATGTCCCACGAAATATCGCCCGACAGGTT
TGATACTGTAACGAAGAACGTGTCCGGGTCCAACGCACGCACACCTGGTG
GCATTCAGCGTCTAAATGTGGGTCAGAGGGCACCGTACGCATGGCTAGAC
ACGGAGCCACGCCCACTCCACCTGTTGTCCAGATTCATGGCGCCCAAGTA
CAAGCTGTCCTATTTCGACATGAGGGCTCGCGGAGAGCCCACGAGAATGC
TGTTCGCTGCCGCCGGGATAGAGTTTGAAGACGATAGGATCTCCTTCGAC
AAATGGCCGTCAGTGAAAGGGACGACCCCCATGGGCCAGCTGCCCGTGCT
GGAGGTTGACGGCGTCAAGTTGTGCCAGAGCATGCCCATAGCTCGTTTCG
TGGCCAAGGAGACAGGAATGGCGGGTAAGACCAACCTGGAGCAGGCTCAG
GCGGACGCCTTCGTGGACGAGATTATCCCAGTCCTGCCCACACTGTACAA
CGTGGCACTCGGTTCTGAGGAGGAGAAAAAGGCAGCCCTGGCCAAAGGCT
TTGACAAGACCATGGAGACCACACTGGCGAGGTGCGAGAAGCTGTGCGGC
TCCAGCGGGTTTCTCGTCGGGAACAGCCTCCTCTGGTGCGATCTGGTTCT
TCACACCGTCGCGACTAACATCGAGAACTACAAGCCGGGAACCATGAAGA
ACTACCCCAAACTCACCAAGGTCATGGACAGCGTCAACGCCAACCCCAAA
ATCGCAGCGTGGATCGCCAAGCGTCCGGACACCTCTTTCTAGATGTCCCA
CGAAATATCGCCCGACAGGTTTGATACTGTAACGAAGAACGTGTCCGGGT
CCAACGCACGCACACCTGGTGGCATTCAGCGTCTAAATGTGGGTCAGAGG
GCACCGTACGCATGGCTAGACACGGAGCCACGCCCACTCCACCTGTTGTC
CAGATTCATGGCGCCCAAGTACAAGCTGTCCTATTTCGACATGAGGGCTC
GCGGAGAGCCCACGAGAATGCTGTTCGCTGCCGCCGGGATAGAGTTTGAA
GACGATAGGATCTCCTTCGACAAATGGCCGTCAGTGAAAGGGACGACCCC
CATGGGCCAGCTGCCCGTGCTGGAGGTTGACGGCGTCAAGTTGTGCCAGA
GCATGCCCATAGCTCGTTTCGTGGCCAAGGAGACAGGAATGGCGGGTAAG
ACCAACCTGGAGCAGGCTCAGGCGGACGCCTTCGTGGACGAGATTATCCC
AGTCCTGCCCACACTGTACAACGTGGCACTCGGTTCTGAGGAGGAGAAAA
AGGCAGCCCTGGCCAAAGGCTTTGACAAGACCATGGAGACCACACTGGCG
AGGTGCGAGAAGCTGTGCGGCTCCAGCGGGTTTCTCGTCGGGAACAGCCT
CCTCTGGTGCGATCTGGTTCTTCACACCGTCGCGACTAACATCGAGAACT
ACAAGCCGGGAACCATGAAGAACTACCCCAAACTCACCAAGGTCATGGAC
AGCGTCAACGCCAACCCCAAAATCGCAGCGTGGATCGCCAAGCGTCCGGA
CACCTCTTTCTAGATGTCCCACGAAATATCGCCCGACAGGTTTGATACTG
TAACGAAGAACGTGTCCGGGTCCAACGCACGCACACCTGGTGGCATTCAG
CGTCTAAATGTGGGTCAGAGGGCACCGTACGCATGGCTAGACACGGAGCC
ACGCCCACTCCACCTGTTGTCCAGATTCATGGCGCCCAAGTACAAGCTGT
CCTATTTCGACATGAGGGCTCGCGGAGAGCCCACGAGAATGCTGTTCGCT
GCCGCCGGGATAGAGTTTGAAGACGATAGGATCTCCTTCGACAAATGGCC
GTCAGTGAAAGGGACGACCCCCATGGGCCAGCTGCCCGTGCTGGAGGTTG
ACGGCGTCAAGTTGTGCCAGAGCATGCCCATAGCTCGTTTCGTGGCCAAG
GAGACAGGAATGGCGGGTAAGACCAACCTGGAGCAGGCTCAGGCGGACGC
CTTCGTGGACGAGATTATCCCAGTCCTGCCCACACTGTACAACGTGGCAC
TCGGTTCTGAGGAGGAGAAAAAGGCAGCCCTGGCCAAAGGCTTTGACAAG
ACCATGGAGACCACACTGGCGAGGTGCGAGAAGCTGTGCGGCTCCAGCGG
GTTTCTCGTCGGGAACAGCCTCCTCTGGTGCGATCTGGTTCTTCACACCG
TCGCGACTAACATCGAGAACTACAAGCCGGGAACCATGAAGAACTACCCC
AAACTCACCAAGGTCATGGACAGCGTCAACGCCAACCCCAAAATCGCAGC
GTGGATCGCCAAGCGTCCGGACACCTCTTTCTAGATGTCCCACGAAATAT
CGCCCGACAGGTTTGATACTGTAACGAAGAACGTGTCCGGGTCCAACGCA
CGCACACCTGGTGGCATTCAGCGTCTAAATGTGGGTCAGAGGGCACCGTA
CGCATGGCTAGACACGGAGCCACGCCCACTCCACCTGTTGTCCAGATTCA
TGGCGCCCAAGTACAAGCTGTCCTATTTCGACATGAGGGCTCGCGGAGAG
CCCACGAGAATGCTGTTCGCTGCCGCCGGGATAGAGTTTGAAGACGATAG
GATCTCCTTCGACAAATGGCCGTCAGTGAAAGGGACGACCCCCATGGGCC
AGCTGCCCGTGCTGGAGGTTGACGGCGTCAAGTTGTGCCAGAGCATGCCC
ATAGCTCGTTTCGTGGCCAAGGAGACAGGAATGGCGGGTAAGACCAACCT
GGAGCAGGCTCAGGCGGACGCCTTCGTGGACGAGATTATCCCAGTCCTGC
CCACACTGTACAACGTGGCACTCGGTTCTGAGGAGGAGAAAAAGGCAGCC
CTGGCCAAAGGCTTTGACAAGACCATGGAGACCACACTGGCGAGGTGCGA
GAAGCTGTGCGGCTCCAGCGGGTTTCTCGTCGGGAACAGCCTCCTCTGGT
GCGATCTGGTTCTTCACACCGTCGCGACTAACATCGAGAACTACAAGCCG
GGAACCATGAAGAACTACCCCAAACTCACCAAGGTCATGGACAGCGTCAA
CGCCAACCCCAAAATCGCAGCGTGGATCGCCAAGCGTCCGGACACCTCTT
TCTAGATGTCCCACGAAATATCGCCCGACAGGTTTGATACTGTAACGAAG
AACGTGTCCGGGTCCAACGCACGCACACCTGGTGGCATTCAGCGTCTAAA
TGTGGGTCAGAGGGCACCGTACGCATGGCTAGACACGGAGCCACGCCCAC
TCCACCTGTTGTCCAGATTCATGGCGCCCAAGTACAAGCTGTCCTATTTC
GACATGAGGGCTCGCGGAGAGCCCACGAGAATGCTGTTCGCTGCCGCCGG
GATAGAGTTTGAAGACGATAGGATCTCCTTCGACAAATGGCCGTCAGTGA
AAGGGACGACCCCCATGGGCCAGCTGCCCGTGCTGGAGGTTGACGGCGTC
AAGTTGTGCCAGAGCATGCCCATAGCTCGTTTCGTGGCCAAGGAGACAGG
AATGGCGGGTAAGACCAACCTGGAGCAGGCTCAGGCGGACGCCTTCGTGG
ACGAGATTATCCCAGTCCTGCCCACACTGTACAACGTGGCACTCGGTTCT
GAGGAGGAGAAAAAGGCAGCCCTGGCCAAAGGCTTTGACAAGACCATGGA
GACCACACTGGCGAGGTGCGAGAAGCTGTGCGGCTCCAGCGGGTTTCTCG
TCGGGAACAGCCTCCTCTGGTGCGATCTGGTTCTTCACACCGTCGCGACT
AACATCGAGAACTACAAGCCGGGAACCATGAAGAACTACCCCAAACTCAC
CAAGGTCATGGACAGCGTCAACGCCAACCCCAAAATCGCAGCGTGGATCG
CCAAGCGTCCGGACACCTCTTTCTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000006 | genome | Sc0000006:4900288..4905307 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95124_evm0 |
| Biotype | protein_coding |
|
