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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL91540_cuf2 >transcript:BL91540_cuf2-protein ID=transcript:BL91540_cuf2-protein|Name=transcript:BL91540_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=302bp
MHFAAHANRDQPVFSNYSTLSSRYRWREHQQQMEISGTTVLVVSIAMWVV
AVLFSSPELVVRRTVEPDSKGGKLVCIDVWPSSQLKMVYKGFLFALCFLG
PFFVIGYLWVTVGIKTCCESGEPRDVVIERNHSPSASPTRRKGNKYFRMM
KVIVAIFCFLWLPLYVSWTLEAYGDYSRFLKEKVKGYIYPIALWTAFSNS
LINPFICGYYTKNLGKSCKKKPRRSRQARKNWENSISSNNSSSDGKIGHI
ELNSVCGSTEKADDDQGRILVLPTDKDVILEPVRRLPTDCSTEPLTRTEV
KA Run BLAST on NCBI mRNA from alignment at Sc0000095:280292..282296+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL91540_cuf2 ID=transcript:BL91540_cuf2|Name=transcript:BL91540_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=2005bp|location=Sequence derived from alignment at Sc0000095:280292..282296+ (Branchiostoma lanceolatum)
ACTGGAACCATGAGAGGCACTGAACGCGAGTGTGGATGGGAAAAGCATAT
TAAGCTGATCCAAGGTTCCCTCAAAACATTACCTCCATTTATCATGGAGG
AAACAAGAGTTGAAAGAGTTTTCTCAGCATTCTTTAGCTTCATATCTAAA
TTGCTCGATAATTCAGCTTGGGTGCAAAAGCCTTTCCCCCCACTGCCTAC
ATTTTACGACGTAAATGTCTCCAACAACGATGTGCATAATCCATCTATAG
TCAGGCTGCGGCAAAAGTGGTGGGTAATGTATGACTCTTTTGTTGCGACC
GGACTTCGCTTGAATTCAGATATTGAATGGATTCTCCTCGCAGCAGCAGC
TTCGTATCAATCAAAAGTCATAGGGTATCGATTTCTGTACACAGTAGCAC
CCGAACCTTGTTTGGATAACAAAGAAAATAATGTTTCCTGTATAACGCAG
GCCGGATACTCCCGTTTTTACAATTTCATGCATCACTACGATAGAGAAAC
GTTTTCATTAAAACCCCATTTATCCCCGCTAAAACGATTTAGATACGACG
AACCAAGATCTGAATATTCTCTTCCGTGCAACTCTAGTTAACTAAACCCA
TGTATGAATGCGTATGGGTGACTAATCCCACTATTAGAACGTTCAGTTAC
GTGGTATTGATGTCAAAGATCTAAACATATAGTGTTTATTCAAATCTTGG
ATTTCAAGTACACATGTGTAGTAAAATGCATTGTGGGCAATATGTGAAAG
GTGAACTCCCTACCTTCTTAAGAGTTATTTTCTCGACCTTGATTTGCGTA
ACACTCTGAAGACGTTGTTTATGTCCCAGAGGCCGTTACTTCTGATGTAG
TGTACACAATGCATTTCGCTGCACATGCGAATCGTGACCAACCAGTTTTC
AGTAATTATTCTACCTTATCTTCCAGGTATAGGTGGAGGGAACATCAACA
ACAAATGGAGATATCAGGAACCACAGTTCTTGTAGTGTCCATTGCTATGT
GGGTCGTTGCCGTACTCTTTTCCTCACCCGAACTAGTGGTGAGAAGAACT
GTTGAACCAGACTCAAAAGGAGGTAAACTTGTGTGTATCGATGTTTGGCC
ATCATCGCAGCTTAAAATGGTTTACAAGGGTTTCCTGTTTGCGTTGTGCT
TTCTCGGACCATTTTTCGTAATCGGATATCTATGGGTGACTGTTGGAATT
AAAACGTGCTGTGAATCGGGGGAGCCACGAGATGTAGTCATCGAACGCAA
CCACTCGCCGAGTGCCTCTCCAACGAGACGGAAGGGAAACAAGTATTTTC
GTATGATGAAGGTCATCGTGGCGATCTTCTGTTTTCTATGGCTGCCACTA
TACGTCAGCTGGACCCTGGAAGCCTACGGAGACTATTCCCGGTTTCTGAA
AGAAAAAGTAAAAGGTTATATCTACCCAATCGCGCTATGGACTGCCTTTA
GTAATAGTTTGATCAATCCGTTCATATGCGGGTACTACACCAAGAACTTG
GGTAAATCGTGTAAAAAGAAGCCTCGAAGAAGTCGACAGGCCCGGAAAAA
CTGGGAAAATTCAATATCTTCCAACAACTCGAGCTCGGACGGTAAGATTG
GTCATATTGAACTGAATTCGGTGTGTGGCTCAACAGAAAAGGCCGACGAT
GATCAGGGCAGGATCCTGGTTCTACCGACCGACAAAGATGTCATTCTGGA
GCCTGTCAGGCGTTTACCGACAGATTGCAGTACGGAACCATTGACACGGA
CAGAAGTGAAAGCGTGACTACAGTGCTTTTGATAAATGTAAAATTCAACC
TATTAACTAATATACGTCTTAAACAACGGTAGGTTTGGAATGATAACAAA
AAAGTAACTGTACATCGAAGAATGATAGCTTGTATGATCTTGCTTGTATC
CAACTAACAAGTTATGTAATTATCCTCAAGAACCGAAAATTGCAAAGAAA
CGTTTTAAAAGAGGGACTTGTACATACCTGTCAACATTAACAGTGTTAAG
CAATG Coding sequence (CDS) from alignment at Sc0000095:280292..282296+ >transcript:BL91540_cuf2 ID=transcript:BL91540_cuf2|Name=transcript:BL91540_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=909bp|location=Sequence derived from alignment at Sc0000095:280292..282296+ (Branchiostoma lanceolatum)
ATGCATTTCGCTGCACATGCGAATCGTGACCAACCAGTTTTCAGTAATTA
TTCTACCTTATCTTCCAGGTATAGGTGGAGGGAACATCAACAACAAATGG
AGATATCAGGAACCACAGTTCTTGTAGTGTCCATTGCTATGTGGGTCGTT
GCCGTACTCTTTTCCTCACCCGAACTAGTGGTGAGAAGAACTGTTGAACC
AGACTCAAAAGGAGGTAAACTTGTGTGTATCGATGTTTGGCCATCATCGC
AGCTTAAAATGGTTTACAAGGGTTTCCTGTTTGCGTTGTGCTTTCTCGGA
CCATTTTTCGTAATCGGATATCTATGGGTGACTGTTGGAATTAAAACGTG
CTGTGAATCGGGGGAGCCACGAGATGTAGTCATCGAACGCAACCACTCGC
CGAGTGCCTCTCCAACGAGACGGAAGGGAAACAAGTATTTTCGTATGATG
AAGGTCATCGTGGCGATCTTCTGTTTTCTATGGCTGCCACTATACGTCAG
CTGGACCCTGGAAGCCTACGGAGACTATTCCCGGTTTCTGAAAGAAAAAG
TAAAAGGTTATATCTACCCAATCGCGCTATGGACTGCCTTTAGTAATAGT
TTGATCAATCCGTTCATATGCGGGTACTACACCAAGAACTTGGGTAAATC
GTGTAAAAAGAAGCCTCGAAGAAGTCGACAGGCCCGGAAAAACTGGGAAA
ATTCAATATCTTCCAACAACTCGAGCTCGGACGGTAAGATTGGTCATATT
GAACTGAATTCGGTGTGTGGCTCAACAGAAAAGGCCGACGATGATCAGGG
CAGGATCCTGGTTCTACCGACCGACAAAGATGTCATTCTGGAGCCTGTCA
GGCGTTTACCGACAGATTGCAGTACGGAACCATTGACACGGACAGAAGTG
AAAGCGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000095 | genome | Sc0000095:280292..282296 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL91540_cuf2 |
| Biotype | protein_coding |
|
