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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL91451_cuf0 >transcript:BL91451_cuf0-protein ID=transcript:BL91451_cuf0-protein|Name=transcript:BL91451_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=107bp
MCPILNKVLTVCLKYQSEGGTTPYYTPAEEKPSLGRRILKTLGFTGKLRV
NKYRLRNSGLHMYACCTDGIDFSDFFEACGLPDTLNSWFLIMELHVWMCL
VRMVGGT Run BLAST on NCBI mRNA from alignment at xfSc0003438:3..1860+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL91451_cuf0 ID=transcript:BL91451_cuf0|Name=transcript:BL91451_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1858bp|location=Sequence derived from alignment at xfSc0003438:3..1860+ (Branchiostoma lanceolatum)
GAAGTTTATAACGCCCAGCTTCGTTACTGTTCCTGTTTTCAATCAAGCAC
ACCAAGTGCTTTACGTGCCCATCCAAAAGGATGAAAGCGACCCAACTTGT
GCGTGGTGGGGTTCAAACCCCTGCCTTCGAATTCCGTATCTACAAATGAT
CTATATTGCATAGTATATGATATGTGCCCCATTCTTAACAAGGTTCTTAC
TGTATGTCTTAAGTATCAGAGTGAAGGAGGTACCACCCCTTACTACACAC
CTGCTGAGGAGAAGCCAAGTCTGGGGAGAAGAATCCTCAAGACACTGGGC
TTCACTGGGAAACTTCGAGTCAACAAATATGTAAGACACAATCAAAATTT
TATCAAACCTAAACCCCTGATTTGAAATTATTTACGAATTCATTTTCAGT
AGGAGAAAAAGGGTTTAGATGGTATTTTCAGTTTGCAGTTGAGATAATTT
TGTTGAACAGCTTCTATAATTCATTTGTAATACAATGGTAAAAGGTATTT
TCAGGTGGTATCTTTTTTACATAGAGGTCACTGTGAAAACCATGAAATAA
ACCACTGTGAATATGTCAAGATTTACAGTAACTTGACTCTATAGCTAATT
ATAACATAGAAAAATAGCGAATTACGAGCAAAAATACCGGGGAAATATGG
GCAGAAAAACCTTAACTCAAGATTTTTGAGGGATTCCTGGTTAGCAAAGC
CTCCATTTTTCAAAAAAAATAATGAACGTACCGTCTAAAATAAGAATGTA
ACGGGCGGACTTGGAGGCGAAAAAAAATAAACGTACCGGTACGTTTATTT
GAGAGGTGAGAGTAGATAAGCTACAAATTGCTTTTTTTTCATCAGCTTAA
ATCTGTTTCAATTGTTTCAACAGAGGTTGCGGAATTCAGGACTACACATG
TACGCATGTTGTACCGATGGAATCGATTTCAGCGACTTTTTTGAAGGTAA
GAGCAAAACGCACACCAAAACTGTGTGGCCCAAGGGCAATGAAAATAGAG
ATAGGCACCGCGGTATATACAGAAAGATGTGGAAAGGATGGGCAAAGCAC
TGTAACCATTTTACTAGAGAATTGAATATAGAAAAGCGAATACCAGACAT
TAAACTTTGTGAACGCCCCAAAATACTGTAATTCTTGTTTCTTAACTTTA
TGTTCACTGTTTTCACGGCTATGTCTGTACCCTGAACTTATCATTACCAT
GAAAAAAATGTTGTAATTGTGTATGATTCCTTCATTCTGTAAACCATGTG
CCGCCACCGTGAAGTTGAAGTTCAGTGAAATGTCCATTTTCCCTCCACCG
TGAAATTTTGCTACCGTGAAGATAGAATGAATTACAGTTTAAATTAAACA
ATCATACTTAAAATATTAAAAATAAATAACTAAAATGCATTCATTCGCTG
TCCTATTATGTTGTGTAGAATTCGAACTCGAAGAAGAAGAATTCCAATGG
TGAGATATGTGTTTCTTCTCAATGTTTGGATGTGAAATGATTGAAAGTTT
TTTCCTATTGTTTCTTTCAGCTTGTGGTCTTCCAGATACCCTGAATTCCT
GGTTTCTTATCATGGAGCTACATGTCTGGTGAGCCCATTTGAATCTTTCA
AGCCAATCTTAAAGTGCTTTCATGTATGGAGGTTTTGTTTTTGGTTTGTC
TGGATGTTAATATCTATATGTGCCTGTGGCTTGTAGGACTTGAACCCTGG
ACTCCTAGTCTGTATTACTGACAGTATTGTGTGTGTGGGACTTGAAGTTG
TACCCTGAACCCCTAGTCTGTTTAAAAGTACTGACAATGTTGTGTGTTTC
AGGATGTGTTTAGTGAGGATGGTTGGTGGGACCTGAACCCTGGACCCTTA
GTCTGTAT Coding sequence (CDS) from alignment at xfSc0003438:3..1860+ >transcript:BL91451_cuf0 ID=transcript:BL91451_cuf0|Name=transcript:BL91451_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1296bp|location=Sequence derived from alignment at xfSc0003438:3..1860+ (Branchiostoma lanceolatum)
ATGTGCCCCATTCTTAACAAGGTTCTTACTGTATGTCTTAAGTATCAGAG
TGAAGGAGGTACCACCCCTTACTACACACCTGCTGAGGAGAAGCCAAGTC
TGGGGAGAAGAATCCTCAAGACACTGGGCTTCACTGGGAAACTTCGAGTC
AACAAATATAGGTTGCGGAATTCAGGACTACACATGTACGCATGTTGTAC
CGATGGAATCGATTTCAGCGACTTTTTTGAAGCTTGTGGTCTTCCAGATA
CCCTGAATTCCTGGTTTCTTATCATGGAGCTACATGTCTGGATGTGTTTA
GTGAGGATGGTTGGTGGGACCTGAATGTGCCCCATTCTTAACAAGGTTCT
TACTGTATGTCTTAAGTATCAGAGTGAAGGAGGTACCACCCCTTACTACA
CACCTGCTGAGGAGAAGCCAAGTCTGGGGAGAAGAATCCTCAAGACACTG
GGCTTCACTGGGAAACTTCGAGTCAACAAATATAGGTTGCGGAATTCAGG
ACTACACATGTACGCATGTTGTACCGATGGAATCGATTTCAGCGACTTTT
TTGAAGCTTGTGGTCTTCCAGATACCCTGAATTCCTGGTTTCTTATCATG
GAGCTACATGTCTGGATGTGTTTAGTGAGGATGGTTGGTGGGACCTGAAT
GTGCCCCATTCTTAACAAGGTTCTTACTGTATGTCTTAAGTATCAGAGTG
AAGGAGGTACCACCCCTTACTACACACCTGCTGAGGAGAAGCCAAGTCTG
GGGAGAAGAATCCTCAAGACACTGGGCTTCACTGGGAAACTTCGAGTCAA
CAAATATAGGTTGCGGAATTCAGGACTACACATGTACGCATGTTGTACCG
ATGGAATCGATTTCAGCGACTTTTTTGAAGCTTGTGGTCTTCCAGATACC
CTGAATTCCTGGTTTCTTATCATGGAGCTACATGTCTGGATGTGTTTAGT
GAGGATGGTTGGTGGGACCTGAATGTGCCCCATTCTTAACAAGGTTCTTA
CTGTATGTCTTAAGTATCAGAGTGAAGGAGGTACCACCCCTTACTACACA
CCTGCTGAGGAGAAGCCAAGTCTGGGGAGAAGAATCCTCAAGACACTGGG
CTTCACTGGGAAACTTCGAGTCAACAAATATAGGTTGCGGAATTCAGGAC
TACACATGTACGCATGTTGTACCGATGGAATCGATTTCAGCGACTTTTTT
GAAGCTTGTGGTCTTCCAGATACCCTGAATTCCTGGTTTCTTATCATGGA
GCTACATGTCTGGATGTGTTTAGTGAGGATGGTTGGTGGGACCTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0003438 | genome | xfSc0003438:3..1860 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL91451_cuf0 |
| Biotype | protein_coding |
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