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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL91159_cuf0 >transcript:BL91159_cuf0-protein ID=transcript:BL91159_cuf0-protein|Name=transcript:BL91159_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=740bp
MKTFPNGGNKSFGIWNIHGLGSKLEDVDFLARINKFDFFSLLETWTTDNS
KIDVPNYSYLHLHRTKSKRAKRSSGGIIFFYRNEYKNHVRKVPSKSSDIL
WVRVDRELLGLSKDLFICSVYISPSSSTTHKISENHVLDILESEISSLST
QGFILLGGDLNSRFGDLHDYVENDIHDDANQIVNSNFNSDRQHMDKAPPN
KFGRLICDLCIQANLSILNGRVAGDLQGKFTCYQPNGSSTVDYMLSSQSF
LKHILLFRVNPLNMFSDHCMLSVFIHSKSAGHRVKEKHKTCNVRPAPKRF
GWNETSAKNFFQSISQPRILQRLHAISHENLNNAATPDQIENIVSEFSSL
LRDAGHECLSLKRKRKHVRKKQNKRWFDKSCTEMKREIKNLASLLEKNPL
NSEIRGRFFKTKKEYKKLVKKKKRDFHQQIMNQLSSLRETNPTAFWNLVN
KLKPEKTPVSNQISDETWLQHFSNLNKHSTDNNSNVDASATDSVDTCLPS
VPNMDSSILDSSITEKELDLAISHLKNNKSSCDDMVLNEMLKCGKLILKK
PLLHIFNSCLRNGYYPKEWSRCHIVPIHKSGDTALPDNYRGISIISCLGK
LFSSILNTRLVNYAEHYSLFKPQQAGFRKKFRTTDNIFVLSTLVSRYLSR
NKRLYACFVDFSKAFDSVWREGLLLKLNKLGIGGKFLLTIKDMYSKTTNC
VKTSQGLTETFVTNCGVRQGCNLSPTLFNLFISDLADAFD Run BLAST on NCBI mRNA from alignment at Sc0000271:51572..54045- Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL91159_cuf0 ID=transcript:BL91159_cuf0|Name=transcript:BL91159_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2474bp|location=Sequence derived from alignment at Sc0000271:51572..54045- (Branchiostoma lanceolatum)
ATTCAATCATACTAGTAGGTTACTTACTTATTCATTTCACAAACTGCAAT
GCATCAAAAGGGATTATTTCCCTCATTATCTTATACTATTTATTTGATCA
CTTTTTTCAAGTTTGTTTCTTCTTTCAAATAGTTTAACCAACGTTTTTAG
ATTTTTGCTATTTAGATTTTGCTAGCCACCTTGAAGTTGAAATGTTATAT
TGAGGAATAAGGTAGAGACACGATTTTTACTTGCACAATCATACATTATT
CGAGATGAAAACGTTCCCAAATGGCGGAAACAAGAGCTTCGGCATTTGGA
ATATTCATGGCTTAGGGTCGAAATTAGAAGACGTAGATTTTTTAGCGCGT
ATTAACAAATTTGATTTCTTTTCGCTTCTGGAAACATGGACTACAGATAA
CTCAAAAATTGACGTTCCAAATTACAGCTATTTACACCTACACAGAACCA
AGAGTAAACGAGCGAAACGCTCGTCGGGGGGTATTATCTTTTTCTACAGA
AATGAATATAAAAATCACGTAAGGAAAGTTCCATCCAAATCTTCAGATAT
TCTCTGGGTGCGAGTGGATCGCGAACTTTTAGGATTGTCTAAAGACCTAT
TTATTTGTTCTGTGTACATTAGCCCTAGTTCATCCACCACGCATAAAATC
TCCGAAAATCATGTTTTAGATATTTTAGAAAGCGAAATATCCAGCCTCAG
CACACAAGGATTTATTCTTCTCGGGGGAGATCTTAACTCTCGTTTCGGTG
ATCTGCATGACTATGTCGAGAATGATATTCATGACGACGCAAATCAAATT
GTAAATTCAAACTTCAATTCGGACCGGCAGCATATGGACAAGGCACCCCC
AAACAAATTTGGTAGACTAATCTGTGACCTCTGTATCCAAGCTAACCTGT
CAATACTAAACGGTAGGGTAGCAGGTGATCTCCAAGGAAAGTTTACTTGC
TATCAACCAAACGGTAGTAGCACTGTCGATTATATGCTCTCTAGCCAATC
CTTCTTAAAACACATTTTATTATTTCGTGTCAATCCCCTAAATATGTTCT
CTGACCATTGTATGTTGTCGGTGTTTATCCACTCCAAATCTGCTGGACAT
CGTGTTAAGGAAAAACATAAAACCTGTAATGTTAGACCAGCTCCTAAACG
ATTTGGCTGGAACGAAACATCAGCCAAAAACTTTTTCCAATCTATAAGCC
AACCTCGCATCTTACAAAGGCTACATGCTATTTCACACGAAAATCTCAAC
AATGCAGCCACCCCAGATCAAATTGAAAACATTGTCTCTGAATTTAGCTC
ATTGTTGAGGGATGCTGGCCATGAATGCTTGAGTCTGAAAAGAAAAAGAA
AACATGTACGAAAAAAACAAAACAAACGATGGTTTGACAAAAGTTGCACG
GAAATGAAACGTGAAATTAAAAACTTGGCTTCCTTACTTGAAAAAAACCC
ATTGAACTCAGAAATACGAGGAAGGTTCTTTAAAACAAAAAAAGAATACA
AGAAACTGGTTAAAAAGAAAAAGCGTGACTTTCATCAGCAAATTATGAAC
CAGCTATCGTCCCTTAGAGAAACTAACCCAACTGCTTTCTGGAACTTGGT
AAACAAGCTAAAACCAGAAAAAACACCTGTAAGCAACCAAATCTCAGACG
AAACTTGGCTACAACACTTTAGTAACCTCAACAAACATTCAACAGATAAC
AACAGTAATGTAGACGCCTCAGCCACTGATTCCGTGGACACTTGTCTTCC
TTCTGTCCCAAATATGGACAGCTCCATATTGGACTCCTCCATAACAGAGA
AAGAATTGGACTTAGCCATATCTCACTTGAAAAATAATAAATCAAGTTGT
GACGACATGGTCTTAAATGAGATGCTAAAATGCGGAAAGCTTATTTTAAA
GAAACCACTTCTACATATCTTCAACTCCTGTCTACGAAATGGTTACTATC
CTAAAGAATGGTCACGTTGTCATATTGTTCCTATTCATAAATCTGGAGAC
ACCGCGCTCCCAGACAACTATCGGGGAATATCAATAATTAGTTGTCTGGG
AAAGCTATTCTCATCTATCTTAAATACACGTCTTGTTAACTATGCAGAAC
ATTACAGCCTTTTCAAACCCCAACAGGCCGGTTTTAGAAAGAAATTTAGA
ACAACTGATAACATTTTTGTATTGTCTACTTTAGTAAGCAGATATCTAAG
CAGGAATAAACGACTCTATGCATGTTTTGTAGATTTTAGCAAGGCCTTTG
ACTCGGTTTGGAGAGAGGGTCTCTTGCTGAAATTGAATAAACTTGGAATA
GGGGGTAAATTTTTGCTTACTATTAAAGACATGTATTCCAAAACAACAAA
TTGTGTAAAAACTAGCCAAGGTCTAACTGAAACTTTTGTAACTAACTGTG
GGGTTCGTCAAGGCTGTAACTTGAGTCCAACATTGTTTAATCTATTCATA
AGTGATTTAGCAGATGCGTTTGAT Coding sequence (CDS) from alignment at Sc0000271:51572..54045- >transcript:BL91159_cuf0 ID=transcript:BL91159_cuf0|Name=transcript:BL91159_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=2220bp|location=Sequence derived from alignment at Sc0000271:51572..54045- (Branchiostoma lanceolatum)
ATGAAAACGTTCCCAAATGGCGGAAACAAGAGCTTCGGCATTTGGAATAT
TCATGGCTTAGGGTCGAAATTAGAAGACGTAGATTTTTTAGCGCGTATTA
ACAAATTTGATTTCTTTTCGCTTCTGGAAACATGGACTACAGATAACTCA
AAAATTGACGTTCCAAATTACAGCTATTTACACCTACACAGAACCAAGAG
TAAACGAGCGAAACGCTCGTCGGGGGGTATTATCTTTTTCTACAGAAATG
AATATAAAAATCACGTAAGGAAAGTTCCATCCAAATCTTCAGATATTCTC
TGGGTGCGAGTGGATCGCGAACTTTTAGGATTGTCTAAAGACCTATTTAT
TTGTTCTGTGTACATTAGCCCTAGTTCATCCACCACGCATAAAATCTCCG
AAAATCATGTTTTAGATATTTTAGAAAGCGAAATATCCAGCCTCAGCACA
CAAGGATTTATTCTTCTCGGGGGAGATCTTAACTCTCGTTTCGGTGATCT
GCATGACTATGTCGAGAATGATATTCATGACGACGCAAATCAAATTGTAA
ATTCAAACTTCAATTCGGACCGGCAGCATATGGACAAGGCACCCCCAAAC
AAATTTGGTAGACTAATCTGTGACCTCTGTATCCAAGCTAACCTGTCAAT
ACTAAACGGTAGGGTAGCAGGTGATCTCCAAGGAAAGTTTACTTGCTATC
AACCAAACGGTAGTAGCACTGTCGATTATATGCTCTCTAGCCAATCCTTC
TTAAAACACATTTTATTATTTCGTGTCAATCCCCTAAATATGTTCTCTGA
CCATTGTATGTTGTCGGTGTTTATCCACTCCAAATCTGCTGGACATCGTG
TTAAGGAAAAACATAAAACCTGTAATGTTAGACCAGCTCCTAAACGATTT
GGCTGGAACGAAACATCAGCCAAAAACTTTTTCCAATCTATAAGCCAACC
TCGCATCTTACAAAGGCTACATGCTATTTCACACGAAAATCTCAACAATG
CAGCCACCCCAGATCAAATTGAAAACATTGTCTCTGAATTTAGCTCATTG
TTGAGGGATGCTGGCCATGAATGCTTGAGTCTGAAAAGAAAAAGAAAACA
TGTACGAAAAAAACAAAACAAACGATGGTTTGACAAAAGTTGCACGGAAA
TGAAACGTGAAATTAAAAACTTGGCTTCCTTACTTGAAAAAAACCCATTG
AACTCAGAAATACGAGGAAGGTTCTTTAAAACAAAAAAAGAATACAAGAA
ACTGGTTAAAAAGAAAAAGCGTGACTTTCATCAGCAAATTATGAACCAGC
TATCGTCCCTTAGAGAAACTAACCCAACTGCTTTCTGGAACTTGGTAAAC
AAGCTAAAACCAGAAAAAACACCTGTAAGCAACCAAATCTCAGACGAAAC
TTGGCTACAACACTTTAGTAACCTCAACAAACATTCAACAGATAACAACA
GTAATGTAGACGCCTCAGCCACTGATTCCGTGGACACTTGTCTTCCTTCT
GTCCCAAATATGGACAGCTCCATATTGGACTCCTCCATAACAGAGAAAGA
ATTGGACTTAGCCATATCTCACTTGAAAAATAATAAATCAAGTTGTGACG
ACATGGTCTTAAATGAGATGCTAAAATGCGGAAAGCTTATTTTAAAGAAA
CCACTTCTACATATCTTCAACTCCTGTCTACGAAATGGTTACTATCCTAA
AGAATGGTCACGTTGTCATATTGTTCCTATTCATAAATCTGGAGACACCG
CGCTCCCAGACAACTATCGGGGAATATCAATAATTAGTTGTCTGGGAAAG
CTATTCTCATCTATCTTAAATACACGTCTTGTTAACTATGCAGAACATTA
CAGCCTTTTCAAACCCCAACAGGCCGGTTTTAGAAAGAAATTTAGAACAA
CTGATAACATTTTTGTATTGTCTACTTTAGTAAGCAGATATCTAAGCAGG
AATAAACGACTCTATGCATGTTTTGTAGATTTTAGCAAGGCCTTTGACTC
GGTTTGGAGAGAGGGTCTCTTGCTGAAATTGAATAAACTTGGAATAGGGG
GTAAATTTTTGCTTACTATTAAAGACATGTATTCCAAAACAACAAATTGT
GTAAAAACTAGCCAAGGTCTAACTGAAACTTTTGTAACTAACTGTGGGGT
TCGTCAAGGCTGTAACTTGAGTCCAACATTGTTTAATCTATTCATAAGTG
ATTTAGCAGATGCGTTTGAT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000271 | genome | Sc0000271:51572..54045 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL91159_cuf0 |
| Biotype | protein_coding |
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