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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL90567_cuf0 >transcript:BL90567_cuf0-protein ID=transcript:BL90567_cuf0-protein|Name=transcript:BL90567_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=1038bp
MMPGLTENLKDIDDARKTAVINDELRRLNVDIAALQETRLADSGTLKEQD
YTFYWQGKGCNEPREHGVGFAVKNTLLRMVEPGSNGSARLLTLRLNTTKG
PITLVSVYAPTLAATPEVKDEFYENLTATIRNIPSDEQLVLLGDFNARVG
DDHESWPACLGKFGVGKMNENGQRALEFCAYHNLCITNSYFQTKPQHKVS
WRHPRSKHWHQLDLILTRRTSLKNVLLTRAYQSADCDTDHSLVCCKFKME
PKKFHHARQPGKPRIDISRMAQPELVEKFTVAFEKEVNSKPSGLSATKKW
NDLRDVMHRTAMATFGKKTTQSHDWFDAKSTEMAPVIEAKRAALAEYKRT
PSERNLHVLRAARNKVKQTARRCANEYWSKLSEDIHIAAITGNIRGMYDG
IKRALGPTQSKTAPLKSTTGEEITDKKLQMERWVEHYSDLYSRQNTVSPS
ALDAIECLPTMDELDAEPTLDELNKAIDSLSTGKAPGSDAIPPDLLKHCK
TVLLLPLHELLCQCWKEGAVPQDMRDSKIVTLYKNKGERSDCNNYRGISL
LSVVGKVYAKVVLARLQRLAERVYPESQCGFRANRSTIDMIFSLRQLQEK
CREQNMPLYIAFIDLTKAFDMVSRDGLFKILPKIGCPPKLQSLIESFHTN
MKGTVLYSGNLSEPFDIRGGVKQGCVLAPTLFGIFFALLLKQAFGTATEG
IYLRTRSDGRLFNLNRLKAKTKVREALIRDLLFADDAGLAAHTEQGLQSL
MDRFSRACNDFGLIISLKKTEVLGQDVEAPPAITIGDYELKAVNHFTYLG
STASNNLSLDKEIDKRIGKAATTLARLTTRVWENPKLSVKTKMAVYNACV
LSTLLYGSETWSTYAKQENRLNAFHMRCMRRILGISWKDKVTNTEVLSRA
GLPTMFTLLRQRRLRWLGHVRRMEDGRIPKDLLYGELISGKRRTGRPQLR
FKDVCKRDLKALDIDTEHWEDLASDRSRWRCKLFRQLKSGEVRLMHSAEE
KRIRRKELCNRTESAYRCDFCGRDCHSRIGLFSHSRCC Run BLAST on NCBI mRNA from alignment at Sc0000352:70100..73931+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL90567_cuf0 ID=transcript:BL90567_cuf0|Name=transcript:BL90567_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=3832bp|location=Sequence derived from alignment at Sc0000352:70100..73931+ (Branchiostoma lanceolatum)
CTCTGACCTACTGCACCTGGGCAGACGGGGCCCATCAGCCTGGGAAGGCA
ACCCATCTAAGGGATGGAAACCCTGATCTCAAACCTCCGCTGCCTTGCGG
CATACCTGGACACAGGAAAGGCTTCGGGAGAACACCCCGAGGATAAATCC
GGAATCGGAGCCCCGAAGGCAGTTCGATGCTATATACTAGTGCAACATCG
CTCTGGCAGCTCCTGCGACGGCACTGGTGCCAAAATGTAGCAGCTCTGCT
GTTCCTTTGGACCCATCAGTGACGTGGAGAGGGGGGACATGCTGCATGGG
CAACAACTCGTCCTCCATATCATCCCGCCCGGGCTAAAATCCTACCAGAC
CCTACACTGGAAAGACAAAACCCGGACAATACACTGGAGAGGACACTCCA
GCTTCGTCAATGGCGTCGACACAACACGGGCAGCAACAGTTACCGGTTTT
AAGCCATCGCTCGTTTGGCGTAGAGCGTGGCGCCAGGGGTTGCTACCGAC
GGTGGGAGGGATCCTCGCGTCCCATTGGACAGCTACCGCCCGCCTCAAGC
TGGGCAGCCCCCAGCCAATAAGGTGCTGTCTCGCCACGGTCTACTATCCT
CGTGGGGTGTGCGGGGAATAGGATAAACTCCAAAAGGTAGGTCGTCATCT
CCGCACCCGGCAACAAAAGACAACAAAAGAGACCAGCTCTACAACTGGGA
TGTTGGAACGTCCGAACTATGATGCCTGGCCTTACAGAGAATCTTAAGGA
CATTGATGATGCCAGGAAGACAGCTGTTATCAATGATGAATTGAGGAGGC
TGAACGTGGATATAGCTGCACTTCAGGAAACACGCCTTGCTGACTCAGGC
ACTCTAAAGGAGCAGGACTACACGTTCTACTGGCAGGGGAAGGGGTGCAA
TGAGCCCAGGGAGCACGGAGTAGGCTTCGCAGTGAAGAACACCTTACTGA
GGATGGTGGAGCCGGGAAGTAATGGATCTGCGCGTCTCCTCACTCTCCGC
CTCAACACAACCAAAGGCCCCATCACCCTTGTCAGCGTATACGCCCCGAC
ACTTGCTGCCACCCCTGAAGTAAAGGATGAATTCTACGAGAATCTCACAG
CTACCATCAGGAACATTCCCAGTGACGAACAACTAGTCCTCCTAGGTGAC
TTCAACGCAAGAGTGGGTGACGACCATGAATCCTGGCCAGCATGCCTTGG
AAAATTTGGTGTTGGCAAGATGAACGAAAATGGACAGCGAGCGCTGGAGT
TTTGCGCATATCACAACCTGTGCATCACAAACTCGTACTTCCAGACCAAG
CCCCAACACAAGGTTTCCTGGCGACACCCTCGCTCGAAGCACTGGCACCA
GCTGGACCTGATCCTGACAAGACGGACCTCGCTCAAGAACGTGCTACTCA
CACGTGCGTATCAGAGTGCAGACTGCGATACAGACCATTCCCTGGTATGC
TGCAAGTTCAAAATGGAACCGAAGAAATTCCACCACGCAAGACAGCCGGG
AAAGCCACGTATCGACATCAGCAGAATGGCTCAACCAGAACTTGTGGAAA
AGTTTACTGTTGCCTTTGAGAAGGAAGTTAACAGCAAGCCATCTGGACTG
TCTGCGACAAAGAAGTGGAATGATCTGCGAGACGTGATGCATCGTACAGC
CATGGCTACCTTCGGAAAGAAGACCACACAGTCACACGACTGGTTTGATG
CCAAGTCAACAGAGATGGCCCCAGTGATAGAAGCCAAACGTGCTGCTCTT
GCAGAGTACAAGAGGACACCCAGCGAGAGGAATCTCCACGTCCTCAGAGC
CGCAAGGAACAAAGTCAAACAGACAGCCCGACGGTGTGCCAACGAGTACT
GGAGCAAGCTTAGTGAAGACATCCATATAGCTGCCATAACAGGAAACATC
AGAGGTATGTATGATGGTATTAAGAGGGCACTTGGACCAACCCAGAGCAA
GACAGCTCCCCTTAAGTCCACCACTGGGGAAGAGATCACAGACAAGAAGC
TACAGATGGAGAGATGGGTGGAGCACTACTCGGACCTCTACTCCAGGCAA
AACACTGTGTCCCCCTCAGCCCTCGACGCAATCGAATGTCTGCCAACCAT
GGATGAACTAGATGCTGAGCCAACCTTGGATGAGCTCAACAAAGCCATCG
ACAGCTTGTCCACAGGAAAGGCACCAGGCAGTGACGCAATCCCGCCCGAC
CTACTCAAACACTGCAAGACCGTCTTACTGCTCCCGCTACACGAACTTCT
CTGTCAGTGCTGGAAGGAAGGTGCAGTCCCACAGGACATGAGAGATTCCA
AGATTGTCACCCTCTACAAAAACAAGGGAGAGAGAAGCGACTGCAACAAC
TACCGGGGAATTTCACTACTCAGCGTGGTCGGCAAGGTATACGCGAAAGT
TGTACTAGCCCGTCTACAACGGCTTGCTGAACGTGTCTACCCCGAGTCGC
AGTGTGGATTTCGTGCCAACAGATCGACGATCGACATGATCTTCTCCCTC
CGTCAGCTGCAAGAGAAGTGCAGGGAACAGAACATGCCCCTGTACATAGC
ATTCATCGACCTCACCAAGGCGTTCGACATGGTTAGCAGAGACGGTCTCT
TCAAGATCTTACCCAAGATAGGCTGTCCACCAAAGCTACAGAGCCTCATC
GAATCCTTCCACACCAACATGAAGGGGACAGTACTGTACAGTGGCAACCT
GTCTGAGCCATTTGACATACGCGGCGGTGTAAAACAAGGTTGCGTTCTGG
CCCCCACGCTGTTCGGGATCTTCTTTGCCCTGCTCCTGAAGCAAGCCTTT
GGAACAGCAACTGAAGGAATTTACCTCCGCACAAGATCCGACGGCAGACT
CTTCAACCTCAACCGCCTCAAGGCCAAAACAAAGGTAAGGGAAGCCCTGA
TCAGAGATCTACTGTTCGCTGATGACGCCGGACTTGCAGCTCACACAGAG
CAGGGACTCCAGTCTTTGATGGATCGCTTCTCCAGGGCATGCAATGACTT
TGGTCTGATCATCAGCCTTAAGAAGACAGAAGTGCTGGGCCAGGATGTAG
AAGCACCCCCGGCCATCACCATCGGTGACTATGAACTGAAGGCTGTGAAC
CACTTCACATACCTCGGATCCACGGCAAGCAACAATCTTTCCTTGGACAA
GGAGATCGACAAGAGGATTGGAAAGGCAGCAACTACACTCGCCCGTCTTA
CCACTCGAGTGTGGGAGAACCCCAAACTCTCTGTCAAGACAAAGATGGCC
GTGTACAACGCATGCGTTCTCAGCACACTTCTCTATGGGAGTGAAACGTG
GTCGACCTATGCCAAGCAGGAGAATAGGCTAAACGCCTTTCACATGAGGT
GTATGCGCCGTATCCTTGGCATATCATGGAAGGACAAAGTGACCAACACC
GAAGTGCTGTCCCGCGCCGGCCTCCCTACCATGTTCACCCTGCTCAGGCA
GCGCAGACTTCGCTGGCTAGGCCACGTCCGTCGCATGGAGGATGGACGAA
TCCCCAAAGACCTTCTCTACGGAGAACTGATCTCAGGAAAGAGACGTACC
GGGAGGCCACAGCTGCGTTTCAAAGATGTCTGCAAGAGGGACTTGAAGGC
TCTAGATATTGATACGGAGCACTGGGAGGACCTTGCAAGTGACCGTTCCA
GGTGGAGATGCAAACTGTTCAGACAGCTCAAATCAGGAGAAGTCAGACTG
ATGCACAGCGCAGAAGAAAAGCGGATCCGCAGAAAAGAGCTTTGCAACAG
AACTGAGTCAGCTTACAGATGTGATTTTTGTGGCAGAGACTGCCATTCTC
GTATAGGGCTGTTTAGCCATAGTCGATGCTGT Coding sequence (CDS) from alignment at Sc0000352:70100..73931+ >transcript:BL90567_cuf0 ID=transcript:BL90567_cuf0|Name=transcript:BL90567_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=3114bp|location=Sequence derived from alignment at Sc0000352:70100..73931+ (Branchiostoma lanceolatum)
ATGATGCCTGGCCTTACAGAGAATCTTAAGGACATTGATGATGCCAGGAA
GACAGCTGTTATCAATGATGAATTGAGGAGGCTGAACGTGGATATAGCTG
CACTTCAGGAAACACGCCTTGCTGACTCAGGCACTCTAAAGGAGCAGGAC
TACACGTTCTACTGGCAGGGGAAGGGGTGCAATGAGCCCAGGGAGCACGG
AGTAGGCTTCGCAGTGAAGAACACCTTACTGAGGATGGTGGAGCCGGGAA
GTAATGGATCTGCGCGTCTCCTCACTCTCCGCCTCAACACAACCAAAGGC
CCCATCACCCTTGTCAGCGTATACGCCCCGACACTTGCTGCCACCCCTGA
AGTAAAGGATGAATTCTACGAGAATCTCACAGCTACCATCAGGAACATTC
CCAGTGACGAACAACTAGTCCTCCTAGGTGACTTCAACGCAAGAGTGGGT
GACGACCATGAATCCTGGCCAGCATGCCTTGGAAAATTTGGTGTTGGCAA
GATGAACGAAAATGGACAGCGAGCGCTGGAGTTTTGCGCATATCACAACC
TGTGCATCACAAACTCGTACTTCCAGACCAAGCCCCAACACAAGGTTTCC
TGGCGACACCCTCGCTCGAAGCACTGGCACCAGCTGGACCTGATCCTGAC
AAGACGGACCTCGCTCAAGAACGTGCTACTCACACGTGCGTATCAGAGTG
CAGACTGCGATACAGACCATTCCCTGGTATGCTGCAAGTTCAAAATGGAA
CCGAAGAAATTCCACCACGCAAGACAGCCGGGAAAGCCACGTATCGACAT
CAGCAGAATGGCTCAACCAGAACTTGTGGAAAAGTTTACTGTTGCCTTTG
AGAAGGAAGTTAACAGCAAGCCATCTGGACTGTCTGCGACAAAGAAGTGG
AATGATCTGCGAGACGTGATGCATCGTACAGCCATGGCTACCTTCGGAAA
GAAGACCACACAGTCACACGACTGGTTTGATGCCAAGTCAACAGAGATGG
CCCCAGTGATAGAAGCCAAACGTGCTGCTCTTGCAGAGTACAAGAGGACA
CCCAGCGAGAGGAATCTCCACGTCCTCAGAGCCGCAAGGAACAAAGTCAA
ACAGACAGCCCGACGGTGTGCCAACGAGTACTGGAGCAAGCTTAGTGAAG
ACATCCATATAGCTGCCATAACAGGAAACATCAGAGGTATGTATGATGGT
ATTAAGAGGGCACTTGGACCAACCCAGAGCAAGACAGCTCCCCTTAAGTC
CACCACTGGGGAAGAGATCACAGACAAGAAGCTACAGATGGAGAGATGGG
TGGAGCACTACTCGGACCTCTACTCCAGGCAAAACACTGTGTCCCCCTCA
GCCCTCGACGCAATCGAATGTCTGCCAACCATGGATGAACTAGATGCTGA
GCCAACCTTGGATGAGCTCAACAAAGCCATCGACAGCTTGTCCACAGGAA
AGGCACCAGGCAGTGACGCAATCCCGCCCGACCTACTCAAACACTGCAAG
ACCGTCTTACTGCTCCCGCTACACGAACTTCTCTGTCAGTGCTGGAAGGA
AGGTGCAGTCCCACAGGACATGAGAGATTCCAAGATTGTCACCCTCTACA
AAAACAAGGGAGAGAGAAGCGACTGCAACAACTACCGGGGAATTTCACTA
CTCAGCGTGGTCGGCAAGGTATACGCGAAAGTTGTACTAGCCCGTCTACA
ACGGCTTGCTGAACGTGTCTACCCCGAGTCGCAGTGTGGATTTCGTGCCA
ACAGATCGACGATCGACATGATCTTCTCCCTCCGTCAGCTGCAAGAGAAG
TGCAGGGAACAGAACATGCCCCTGTACATAGCATTCATCGACCTCACCAA
GGCGTTCGACATGGTTAGCAGAGACGGTCTCTTCAAGATCTTACCCAAGA
TAGGCTGTCCACCAAAGCTACAGAGCCTCATCGAATCCTTCCACACCAAC
ATGAAGGGGACAGTACTGTACAGTGGCAACCTGTCTGAGCCATTTGACAT
ACGCGGCGGTGTAAAACAAGGTTGCGTTCTGGCCCCCACGCTGTTCGGGA
TCTTCTTTGCCCTGCTCCTGAAGCAAGCCTTTGGAACAGCAACTGAAGGA
ATTTACCTCCGCACAAGATCCGACGGCAGACTCTTCAACCTCAACCGCCT
CAAGGCCAAAACAAAGGTAAGGGAAGCCCTGATCAGAGATCTACTGTTCG
CTGATGACGCCGGACTTGCAGCTCACACAGAGCAGGGACTCCAGTCTTTG
ATGGATCGCTTCTCCAGGGCATGCAATGACTTTGGTCTGATCATCAGCCT
TAAGAAGACAGAAGTGCTGGGCCAGGATGTAGAAGCACCCCCGGCCATCA
CCATCGGTGACTATGAACTGAAGGCTGTGAACCACTTCACATACCTCGGA
TCCACGGCAAGCAACAATCTTTCCTTGGACAAGGAGATCGACAAGAGGAT
TGGAAAGGCAGCAACTACACTCGCCCGTCTTACCACTCGAGTGTGGGAGA
ACCCCAAACTCTCTGTCAAGACAAAGATGGCCGTGTACAACGCATGCGTT
CTCAGCACACTTCTCTATGGGAGTGAAACGTGGTCGACCTATGCCAAGCA
GGAGAATAGGCTAAACGCCTTTCACATGAGGTGTATGCGCCGTATCCTTG
GCATATCATGGAAGGACAAAGTGACCAACACCGAAGTGCTGTCCCGCGCC
GGCCTCCCTACCATGTTCACCCTGCTCAGGCAGCGCAGACTTCGCTGGCT
AGGCCACGTCCGTCGCATGGAGGATGGACGAATCCCCAAAGACCTTCTCT
ACGGAGAACTGATCTCAGGAAAGAGACGTACCGGGAGGCCACAGCTGCGT
TTCAAAGATGTCTGCAAGAGGGACTTGAAGGCTCTAGATATTGATACGGA
GCACTGGGAGGACCTTGCAAGTGACCGTTCCAGGTGGAGATGCAAACTGT
TCAGACAGCTCAAATCAGGAGAAGTCAGACTGATGCACAGCGCAGAAGAA
AAGCGGATCCGCAGAAAAGAGCTTTGCAACAGAACTGAGTCAGCTTACAG
ATGTGATTTTTGTGGCAGAGACTGCCATTCTCGTATAGGGCTGTTTAGCC
ATAGTCGATGCTGT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000352 | genome | Sc0000352:70100..73931 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL90567_cuf0 |
| Biotype | protein_coding |
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