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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL90565_cuf0 >transcript:BL90565_cuf0-protein ID=transcript:BL90565_cuf0-protein|Name=transcript:BL90565_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=141bp
CDDSYFVYLLPQTKGCPEAYCAGTEVPCPAGQSSENFGFTPNCTANFPTI
EMNPQLTDGIITSNGEVVEVVMFCDFDPPPWDNLTVEVFWTADGDVIDET
TLDNEKARAVLDQSHLKLGMGKEDILQSPRKVCRRWGTRYS Run BLAST on NCBI mRNA from alignment at Sc0000026:856390..858509- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL90565_cuf0 ID=transcript:BL90565_cuf0|Name=transcript:BL90565_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2120bp|location=Sequence derived from alignment at Sc0000026:856390..858509- (Branchiostoma lanceolatum)
ACTGTGACGACTCGTACTTCGTGTACTTGCTGCCCCAAACAAAGGGTTGT
CCGGAGGCGTATTGCGCAGGTAAAGTCGGATATGGCCCAGTAACTACTTT
CTGTCATTTACATTCTATATCTACATCTATGCTTTGTCTATAGACTACTT
AGGACAATTTGTGTGCATCTTTTAAAATCTATGTTCTTTAGGTAGAGCAT
TAGAAGGACAAAGACAAAAGTGGACGATAATAGGTCACCCTAGCATATTT
CTTCAATGAAGACAGCTCAGTATAGATACATACTCACACGGTGTTTCAAA
GTTACAAATCATGCATTGTTCCTTTTAGATGAGCTGATGATTCTTCCCAT
GGGTTACACATGTGGCTATGTCCGCGCGTTTTTTTTATAGATATATGCCT
TTTTGAATAGGTTGAATGATAATTGGTACCGCTACGTTACGTCCCTAAGC
AATTTTGACTAAAACGTAAATATTTGAAGCAATGATAAACGCCATATGCG
TATGGATTGAACGAAAAAAAGCATCAATTCGAAAAGGATTCTGTCATCTC
ATGTTTTGTTTTTTTTCTGCTGTGCACAATTCATCCATTTCACTCAGGAA
CTGAAGTGCCTTGTCCTGCCGGACAGAGCTCAGAAAACTTCGGATTTACA
CCGAATTGCACAGGTAATTCCCAATTCATGTTCATTGCCAGTTTGAAAAG
AAGAAGCTGCCTATTTTTCTTTTAAGCTGAAACAAATTGCTTTTTTGACT
TTGTGAACTGGATAATTCGATAAAGACTGGTGTAATTTCGTAGGTATAGA
AAATGCATGAATACTAGTATGTGCTTGAACTTGCAAGTTACGTTAATCAG
ATTTCTCCTGCAATGGGAGACCTGACAGATCCCAGTTGTCCATAATATAA
GTTTCTCATTTGTGACCGTAACCGTTTTTGATCTACAGCAAATTTTCCAA
CCATTGAAATGAACCCTCAACTGACTGATGGCATAATTACAAGTAATGGC
GAAGTTGTCGAAGTTGTCATGTTCTGTGACTTCGACCCTCCACCCTGGGA
CAACCTAACAGTGGAGGTGTTCTGGACAGCTGACGGTGACGTCATCGATG
AAACTACTCTAGACAACGAAAAGGCTCGGGCTGTACTCGACCAGAGTCAC
CTCAAACTTGGAATGGGAAAGGAGGTGAGATAACGCGCGTAGCCTTCACT
ATCATTGTGCCTTATGTAGACTTCACTTCAAATAAATAGTATTTTTAACC
GCATTCCCTTTTTATATGACAGATATCTTGCAAAGTCCGCGGAAGGTATG
TAGGCGGTGGGGCACCCGGTACTCTTGAGGTCAGCAATGAATTCTTTGCA
GGGGTAAAGGTACGTAACTTTCATACCCAGCTTTCTTTATCATGTCCCCA
TAATACCTGGTTTTGTAGAAATAGAATGCAAACAGCGGACGTAGATTCTA
GGGTAAAACGAAAACAGTACTACAGATCTAGAGTATATTCATCAGCAACC
AATTTACGTTTCCGTGAAACGTAGATTTAGCATTTCTGGATATCCCAATA
ATTTTTCAAAAAGATTTCCTGACAACCTCTCAGAGATTTATTTGCTCTCT
ACAAAAAAGGTAAAAAAAACACAACGCCGTTTTTGTTGAGCTATGATTTG
TCGAAGCGCAAGTTGGGGGCAGGCAACATTCGTTGCTATGGCATATGCTA
TCTTCATTGACATCGAAACTCGTTTGATATATACAAAAAATAAGATTTCT
GAAAATGCCATGCAGACTGATATCTATATATTAAGAGCAACTGCAATAGG
CATTACTAGTATGCAAAGACATCCATGTTCAACAAGCAAGATGAGACTTA
TGTTTATTGTATTTTGCTCTCCCTTAAATCACTAATTACCGGAATTTTCA
TGTATAAACTTGTTAAACTTGTTCTGTATTTGTTTTAAACAAAAAAACAT
TGATTTCGTCACATTCTCTTCACACAATTCTTGCCTGATAGGTCTTGAAA
AAAGTATTCACCGTCGACGAGGATGGCCCAACAAACACCATACAGCTCCA
ACCGACGCTGCCCCTTGATTGCAGTTCCCTAGGTCCCGACTGCACTGTTT
CGATACCAATAGAATTCGAG Coding sequence (CDS) from alignment at Sc0000026:856390..858509- >transcript:BL90565_cuf0 ID=transcript:BL90565_cuf0|Name=transcript:BL90565_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1704bp|location=Sequence derived from alignment at Sc0000026:856390..858509- (Branchiostoma lanceolatum)
TGTGACGACTCGTACTTCGTGTACTTGCTGCCCCAAACAAAGGGTTGTCC
GGAGGCGTATTGCGCAGGAACTGAAGTGCCTTGTCCTGCCGGACAGAGCT
CAGAAAACTTCGGATTTACACCGAATTGCACAGCAAATTTTCCAACCATT
GAAATGAACCCTCAACTGACTGATGGCATAATTACAAGTAATGGCGAAGT
TGTCGAAGTTGTCATGTTCTGTGACTTCGACCCTCCACCCTGGGACAACC
TAACAGTGGAGGTGTTCTGGACAGCTGACGGTGACGTCATCGATGAAACT
ACTCTAGACAACGAAAAGGCTCGGGCTGTACTCGACCAGAGTCACCTCAA
ACTTGGAATGGGAAAGGAGGATATCTTGCAAAGTCCGCGGAAGGTATGTA
GGCGGTGGGGCACCCGGTACTCTTGATGTGACGACTCGTACTTCGTGTAC
TTGCTGCCCCAAACAAAGGGTTGTCCGGAGGCGTATTGCGCAGGAACTGA
AGTGCCTTGTCCTGCCGGACAGAGCTCAGAAAACTTCGGATTTACACCGA
ATTGCACAGCAAATTTTCCAACCATTGAAATGAACCCTCAACTGACTGAT
GGCATAATTACAAGTAATGGCGAAGTTGTCGAAGTTGTCATGTTCTGTGA
CTTCGACCCTCCACCCTGGGACAACCTAACAGTGGAGGTGTTCTGGACAG
CTGACGGTGACGTCATCGATGAAACTACTCTAGACAACGAAAAGGCTCGG
GCTGTACTCGACCAGAGTCACCTCAAACTTGGAATGGGAAAGGAGGATAT
CTTGCAAAGTCCGCGGAAGGTATGTAGGCGGTGGGGCACCCGGTACTCTT
GATGTGACGACTCGTACTTCGTGTACTTGCTGCCCCAAACAAAGGGTTGT
CCGGAGGCGTATTGCGCAGGAACTGAAGTGCCTTGTCCTGCCGGACAGAG
CTCAGAAAACTTCGGATTTACACCGAATTGCACAGCAAATTTTCCAACCA
TTGAAATGAACCCTCAACTGACTGATGGCATAATTACAAGTAATGGCGAA
GTTGTCGAAGTTGTCATGTTCTGTGACTTCGACCCTCCACCCTGGGACAA
CCTAACAGTGGAGGTGTTCTGGACAGCTGACGGTGACGTCATCGATGAAA
CTACTCTAGACAACGAAAAGGCTCGGGCTGTACTCGACCAGAGTCACCTC
AAACTTGGAATGGGAAAGGAGGATATCTTGCAAAGTCCGCGGAAGGTATG
TAGGCGGTGGGGCACCCGGTACTCTTGATGTGACGACTCGTACTTCGTGT
ACTTGCTGCCCCAAACAAAGGGTTGTCCGGAGGCGTATTGCGCAGGAACT
GAAGTGCCTTGTCCTGCCGGACAGAGCTCAGAAAACTTCGGATTTACACC
GAATTGCACAGCAAATTTTCCAACCATTGAAATGAACCCTCAACTGACTG
ATGGCATAATTACAAGTAATGGCGAAGTTGTCGAAGTTGTCATGTTCTGT
GACTTCGACCCTCCACCCTGGGACAACCTAACAGTGGAGGTGTTCTGGAC
AGCTGACGGTGACGTCATCGATGAAACTACTCTAGACAACGAAAAGGCTC
GGGCTGTACTCGACCAGAGTCACCTCAAACTTGGAATGGGAAAGGAGGAT
ATCTTGCAAAGTCCGCGGAAGGTATGTAGGCGGTGGGGCACCCGGTACTC
TTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000026 | genome | Sc0000026:856390..858509 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL90565_cuf0 |
| Biotype | protein_coding |
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