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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL90476_cuf0 >transcript:BL90476_cuf0-protein ID=transcript:BL90476_cuf0-protein|Name=transcript:BL90476_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=383bp
PDLELAPVPRALFKQPVENTLEDVDTGTVYEIPDAAYQHEDGEIVFQDPV
HTAEANVADIHKAPMIYYGDENVSNVETGEFEVFAEPFKTSATTSEEEAL
EVWKALVQESILNMDTLEAEEGKVEEVGLEIISDIAPMSPEEAEEFRLPE
ELYLEAEHHSLQSLAPLYHPEEGVIELKEQTVTTIPPKLTGESAQIIAVP
TQRLENVTSSTTEIMKAQHFGDEGVIDAREEYIYIIPPYEEDGAEFSMLP
SPQMSQASAVASRTELSPEEHSIYMKEQYVNTIAPESVSDTAHTSTLPRL
QMDQAHIASSRMERFPEEHSLVTKEHYVHTIPPTSTGDTANVSSLPHPEM
SRAQAEAYRIQQLAREDTDDFDDDSVHGLASDE Run BLAST on NCBI mRNA from alignment at xfSc0009048:1..1153+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL90476_cuf0 ID=transcript:BL90476_cuf0|Name=transcript:BL90476_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1153bp|location=Sequence derived from alignment at xfSc0009048:1..1153+ (Branchiostoma lanceolatum)
CTCCAGACCTTGAACTTGCTCCAGTTCCCCGAGCTCTTTTCAAACAGCCA
GTTGAAAATACTCTCGAAGATGTGGACACGGGTACTGTTTATGAAATCCC
AGACGCCGCATATCAACACGAGGACGGAGAAATCGTATTTCAAGACCCAG
TACACACAGCAGAAGCAAATGTTGCTGACATTCACAAAGCACCAATGATA
TACTACGGGGACGAGAACGTCTCCAATGTTGAAACTGGGGAATTTGAAGT
GTTTGCAGAGCCGTTCAAAACTTCAGCAACAACGAGTGAGGAAGAGGCAC
TAGAAGTATGGAAAGCTTTGGTTCAGGAGTCCATTCTCAACATGGACACG
TTGGAAGCAGAGGAGGGGAAAGTTGAGGAAGTCGGGTTGGAGATTATCTC
TGACATTGCTCCGATGTCTCCCGAAGAAGCAGAGGAGTTCAGGCTGCCAG
AGGAACTCTACCTTGAAGCCGAGCATCATTCTCTGCAGAGTTTGGCCCCT
CTTTACCACCCAGAAGAGGGCGTTATCGAGCTAAAAGAACAGACTGTGAC
TACCATACCCCCGAAGCTGACTGGAGAAAGTGCACAGATCATTGCAGTGC
CCACACAGCGATTAGAAAACGTAACGTCATCTACGACAGAGATTATGAAA
GCACAACACTTTGGGGATGAAGGAGTCATAGATGCCAGAGAAGAATACAT
CTACATTATTCCACCTTACGAGGAAGATGGTGCAGAATTTAGTATGTTGC
CTAGCCCCCAGATGAGCCAAGCTTCTGCTGTCGCCTCTCGAACCGAGCTG
TCACCTGAGGAGCACAGCATATATATGAAGGAGCAATATGTCAACACCAT
CGCGCCGGAGTCAGTTTCTGACACAGCGCACACATCCACTCTTCCTCGTC
TACAGATGGACCAGGCACACATAGCGTCCTCCAGAATGGAGCGATTCCCA
GAAGAACACTCTCTTGTTACCAAAGAGCACTATGTTCACACCATTCCTCC
GACATCGACGGGTGACACTGCAAACGTATCTTCACTCCCACACCCGGAAA
TGAGCCGTGCTCAAGCGGAAGCCTACAGGATCCAGCAGCTTGCCAGGGAA
GACACAGACGACTTTGATGACGACAGTGTTCACGGATTGGCATCTGATGA
AAC Coding sequence (CDS) from alignment at xfSc0009048:1..1153+ >transcript:BL90476_cuf0 ID=transcript:BL90476_cuf0|Name=transcript:BL90476_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1149bp|location=Sequence derived from alignment at xfSc0009048:1..1153+ (Branchiostoma lanceolatum)
CCAGACCTTGAACTTGCTCCAGTTCCCCGAGCTCTTTTCAAACAGCCAGT
TGAAAATACTCTCGAAGATGTGGACACGGGTACTGTTTATGAAATCCCAG
ACGCCGCATATCAACACGAGGACGGAGAAATCGTATTTCAAGACCCAGTA
CACACAGCAGAAGCAAATGTTGCTGACATTCACAAAGCACCAATGATATA
CTACGGGGACGAGAACGTCTCCAATGTTGAAACTGGGGAATTTGAAGTGT
TTGCAGAGCCGTTCAAAACTTCAGCAACAACGAGTGAGGAAGAGGCACTA
GAAGTATGGAAAGCTTTGGTTCAGGAGTCCATTCTCAACATGGACACGTT
GGAAGCAGAGGAGGGGAAAGTTGAGGAAGTCGGGTTGGAGATTATCTCTG
ACATTGCTCCGATGTCTCCCGAAGAAGCAGAGGAGTTCAGGCTGCCAGAG
GAACTCTACCTTGAAGCCGAGCATCATTCTCTGCAGAGTTTGGCCCCTCT
TTACCACCCAGAAGAGGGCGTTATCGAGCTAAAAGAACAGACTGTGACTA
CCATACCCCCGAAGCTGACTGGAGAAAGTGCACAGATCATTGCAGTGCCC
ACACAGCGATTAGAAAACGTAACGTCATCTACGACAGAGATTATGAAAGC
ACAACACTTTGGGGATGAAGGAGTCATAGATGCCAGAGAAGAATACATCT
ACATTATTCCACCTTACGAGGAAGATGGTGCAGAATTTAGTATGTTGCCT
AGCCCCCAGATGAGCCAAGCTTCTGCTGTCGCCTCTCGAACCGAGCTGTC
ACCTGAGGAGCACAGCATATATATGAAGGAGCAATATGTCAACACCATCG
CGCCGGAGTCAGTTTCTGACACAGCGCACACATCCACTCTTCCTCGTCTA
CAGATGGACCAGGCACACATAGCGTCCTCCAGAATGGAGCGATTCCCAGA
AGAACACTCTCTTGTTACCAAAGAGCACTATGTTCACACCATTCCTCCGA
CATCGACGGGTGACACTGCAAACGTATCTTCACTCCCACACCCGGAAATG
AGCCGTGCTCAAGCGGAAGCCTACAGGATCCAGCAGCTTGCCAGGGAAGA
CACAGACGACTTTGATGACGACAGTGTTCACGGATTGGCATCTGATGAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0009048 | genome | xfSc0009048:1..1153 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL90476_cuf0 |
| Biotype | protein_coding |
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