transcript:BL90098_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL90098_cuf0
Unique Nametranscript:BL90098_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL90098_cuf0

>transcript:BL90098_cuf0-protein ID=transcript:BL90098_cuf0-protein|Name=transcript:BL90098_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=138bp
DIQSKVNTFYQTLQRRIDLHFPMKSVVKHNSDKEWVTPQIKSLIKRRQQA
FHSRNMILYRKLRNRVNRLCTKARKRHYVHKIHVLKKENPARWHMSIRNI
LNVRRNVSVSVPSSSPLTDKEIAAAINRHFSDIVNQLP
Run BLAST on NCBI

mRNA from alignment at Sc0000065:1028285..1028700+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL90098_cuf0 ID=transcript:BL90098_cuf0|Name=transcript:BL90098_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=416bp|location=Sequence derived from alignment at Sc0000065:1028285..1028700+ (Branchiostoma lanceolatum)
ACGATATCCAGAGTAAAGTTAATACTTTCTATCAAACTCTTCAAAGGAGA
ATAGACCTCCATTTTCCTATGAAATCTGTTGTTAAGCACAATTCAGACAA
AGAATGGGTTACCCCTCAAATTAAATCTCTTATCAAGAGAAGACAACAAG
CTTTTCATTCCCGTAATATGATATTATATAGAAAGCTAAGGAACCGTGTG
AACCGATTGTGTACGAAGGCAAGGAAAAGACATTATGTTCATAAGATACA
TGTTTTAAAGAAGGAGAATCCAGCAAGATGGCACATGTCTATACGAAACA
TTCTTAATGTCCGCCGTAATGTATCAGTGTCTGTTCCCAGCAGTTCACCT
CTAACTGACAAAGAGATCGCTGCTGCGATCAATCGCCACTTTTCAGACAT
TGTGAACCAACTTCCA

Coding sequence (CDS) from alignment at Sc0000065:1028285..1028700+

>transcript:BL90098_cuf0 ID=transcript:BL90098_cuf0|Name=transcript:BL90098_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=414bp|location=Sequence derived from alignment at Sc0000065:1028285..1028700+ (Branchiostoma lanceolatum)
GATATCCAGAGTAAAGTTAATACTTTCTATCAAACTCTTCAAAGGAGAAT
AGACCTCCATTTTCCTATGAAATCTGTTGTTAAGCACAATTCAGACAAAG
AATGGGTTACCCCTCAAATTAAATCTCTTATCAAGAGAAGACAACAAGCT
TTTCATTCCCGTAATATGATATTATATAGAAAGCTAAGGAACCGTGTGAA
CCGATTGTGTACGAAGGCAAGGAAAAGACATTATGTTCATAAGATACATG
TTTTAAAGAAGGAGAATCCAGCAAGATGGCACATGTCTATACGAAACATT
CTTAATGTCCGCCGTAATGTATCAGTGTCTGTTCCCAGCAGTTCACCTCT
AACTGACAAAGAGATCGCTGCTGCGATCAATCGCCACTTTTCAGACATTG
TGAACCAACTTCCA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL90098gene:BL90098Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL90098_cuf0-E1BL90098_cuf0-E1-1564476830-255207Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL90098_cuf0transcript:BL90098_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000065genomeSc0000065:1028285..1028700 +
Properties
Property NameValue
Transcript idBL90098_cuf0
Biotypeprotein_coding