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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL87681_cuf0 >transcript:BL87681_cuf0-protein ID=transcript:BL87681_cuf0-protein|Name=transcript:BL87681_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=136bp
RQLCTVPNMAAFRVLAAIVTLLLYNFCATASQDDGLVVSTVTGQVRGTTT
HTTDLPDKPIYTFLGIPYAAPPVGELRYRPPQPALPWEGVREAVDYGSYC
PQNLTMFNKADHDFPMEFGEKMTMSEDCLTVNVFTP Run BLAST on NCBI mRNA from alignment at Sc0000045:1780348..1782438- Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL87681_cuf0 ID=transcript:BL87681_cuf0|Name=transcript:BL87681_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2091bp|location=Sequence derived from alignment at Sc0000045:1780348..1782438- (Branchiostoma lanceolatum)
CGCCAGTTGTGTACAGTACCGAACATGGCGGCCTTTCGGGTGCTCGCTGC
GATCGTTACACTGCTCCTCTACAATTTTTGTAAGTATGTGGGTTGTGCGG
CTAGGGTCGTAGCGGCATCTATGATATCCAGCACTGTGTAAAAATAGGCA
AGCCACGCGGCAAATATTCAAATATGTTAACTCTGTTATGTTGCTGATGA
CTGGGATGGACTGATTTGAGGCTCAGAATTAGAAATGATACACAGCGGGC
TTTTTCTACACATGGGCTCCACGTCTGTTACGTTTTTCGTACGCCAATGC
TACGTTTAGCATTGTGGGAGGGCGATGGTGCTACTTGCAATGCATGAAAA
TAAGCCCCTTTCTGATAACATGGTTATCCTTGACATGGGTCACTGCGAGC
ATGGGTAAGATCGATTATGTGTAAGATGTATTTTAGACAGGGGTACCTCA
TGAATGGAGGCATTGTTCGACCACGTAATGTGACGTAATATGACCTTGGT
TGACAACAACTTACTATGTAGTTTCCGGTCTCGTTACATTCCGTATGAGC
AGCTTTAAAGCATTATAATACCTTTGCTGCTATGCACGTACAATGTCATG
TGAGAGGTCAACGTACTTTCAAAGGCGTGCGGGCACGTTATGTGTGCGCG
GGGTGTGCTAAATCTCCAAGCAGATGTAAGAAACCGCCTCAGCCCTAATG
TTGATTATATATATGCATGTATTTGCGACATTCGGTAGTGCACCTTTAAC
ACTTCGTTGGCTCTGGAAAGACGTACTGAGTCTGAGCTCATATCTGCTTG
GAGATTTAACACACGCCGCGCACACGATTTTTCCACAAGAGGGTCATTAA
AAGTACGTTGACCCTTCACATGACATTGTACGTGTCCATGGTAGCAGTGT
AAGGGTGTTGGTACGGAACGTAACGTATGGCTGGTAAACTTTTGAAGATT
TGTCAAACGGCCGTGTAGAATTTGTGTTCAAGTCATTTCTTTGGCAGATA
TGTATTCAAAATTATGAGAACCATACCTATTCTTCAAAAGGCGCAATCAA
TGCATATGGGACAGGAAAGAGCTAACGTGGTATGAAATCTGGGTTAGCGT
AGGCAAACATCCTGGAAACACAAGGACACATTTACGAGACCACGTGAAGT
CAAGAGGCGATGGTATGTTGTAAAAATCGTAATCGATAAGAATATATTAT
AAGATCTGTGTACCAATGCCATTCTGCTACAAACTTCAGTACAACTGAAC
AGGAAACAAAACATTGTAAACTATCCAGATTTCAAACCTTTGCCATGATC
GTAAACAATAATATTTATCATGCAAAATGTATAACGTTCAGGACAGTTTT
GAAACGTCACCCTACATAAGAACATTACATTGAGATACACATGCACATGA
TGAGCTGTAAGTAATGCAAAGCAAAAACAAATTTGCATAATCAAAGGGGA
AACTTTATATTTGAAGTGTCACCGATGTAGAAAGTTGAGACAAGGCATTT
TATGACAAGTGTGACATTATTAGAAACCAATTATGCAAATATGACGTAAT
GTGTAAAATTCATATCATGCAAACTATATACACCTGTGTTAATTGTCTTA
TCTTTTTGCTTATACCTGTGTATAAACATACAGTTAGTTAAAGATAAACA
CCATCATACATATACCATGTGAGTTTGCATGATCAATTACGGAATGTTTA
AAAAGCATTTTGCGTGGAGATTAGACCTTCACATAACTGTTCTAATCCTA
TCCCCACTAGGTGCTACAGCCAGTCAGGATGACGGTCTTGTTGTGTCCAC
GGTGACTGGACAAGTCCGTGGAACAACAACCCACACAACCGACCTTCCCG
ACAAACCGATCTACACTTTCCTGGGCATCCCGTACGCAGCGCCACCTGTT
GGAGAACTCCGGTACCGCCCGCCCCAGCCTGCCCTCCCGTGGGAGGGGGT
CAGGGAGGCCGTGGATTACGGCTCTTACTGTCCCCAAAATCTTACCATGT
TCAACAAGGCGGATCATGACTTTCCAATGGAGTTTGGAGAGAAAATGACC
ATGAGCGAGGACTGCCTGACAGTCAACGTCTTCACTCCAAC Coding sequence (CDS) from alignment at Sc0000045:1780348..1782438- >transcript:BL87681_cuf0 ID=transcript:BL87681_cuf0|Name=transcript:BL87681_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=816bp|location=Sequence derived from alignment at Sc0000045:1780348..1782438- (Branchiostoma lanceolatum)
CGCCAGTTGTGTACAGTACCGAACATGGCGGCCTTTCGGGTGCTCGCTGC
GATCGTTACACTGCTCCTCTACAATTTTTGTGCTACAGCCAGTCAGGATG
ACGGTCTTGTTGTGTCCACGGTGACTGGACAAGTCCGTGGAACAACAACC
CACACAACCGACCTTCCCGACAAACCGATCTACACTTTCCTGGGCATCCC
GTACGCAGCGCCACCTGTTGGAGAACTCCGGTACCGCCCGCCCCAGCCTG
CCCTCCCGTGGGAGGGGGTCAGGGAGGCCGTGGATTACGGCTCTTACTGT
CCCCAAAATCTTACCATGTTCAACAAGGCGGATCATGACTTTCCAATGGA
GTTTGGAGAGAAAATGACCATGAGCGAGGACTGCCTGACAGTCAACGTCT
TCACTCCACGCCAGTTGTGTACAGTACCGAACATGGCGGCCTTTCGGGTG
CTCGCTGCGATCGTTACACTGCTCCTCTACAATTTTTGTGCTACAGCCAG
TCAGGATGACGGTCTTGTTGTGTCCACGGTGACTGGACAAGTCCGTGGAA
CAACAACCCACACAACCGACCTTCCCGACAAACCGATCTACACTTTCCTG
GGCATCCCGTACGCAGCGCCACCTGTTGGAGAACTCCGGTACCGCCCGCC
CCAGCCTGCCCTCCCGTGGGAGGGGGTCAGGGAGGCCGTGGATTACGGCT
CTTACTGTCCCCAAAATCTTACCATGTTCAACAAGGCGGATCATGACTTT
CCAATGGAGTTTGGAGAGAAAATGACCATGAGCGAGGACTGCCTGACAGT
CAACGTCTTCACTCCA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000045 | genome | Sc0000045:1780348..1782438 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL87681_cuf0 |
| Biotype | protein_coding |
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