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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL87539_cuf0 >transcript:BL87539_cuf0-protein ID=transcript:BL87539_cuf0-protein|Name=transcript:BL87539_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=121bp
MGKISIICIVLLCMVNGLAALSCIPCEERECVDPRPCRRDAVVKDVCGCC
DVCAKVKGEVCGGPWDIQGKCAKGLTCVKPEIEGSGDDFIISDFNQSGTC
EKDKKDKKEKVKKTGRRRFGG Run BLAST on NCBI mRNA from alignment at Sc0000007:6499394..6500972+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL87539_cuf0 ID=transcript:BL87539_cuf0|Name=transcript:BL87539_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1579bp|location=Sequence derived from alignment at Sc0000007:6499394..6500972+ (Branchiostoma lanceolatum)
AGGCAATCAATCAAAAACAGGATGTGAAAAGACGGTAAGGTACAACTTTG
CACCAAATCATCAGAACGACGAGAACTTCACTTGAGACGGACACAGTGTG
AAGTCTCATCCCCACAATCCAGCTTCTGACTACCAACAACTTTTGTGGTA
TTTCCGCAGTAATGCTATGATATATATTTAAGTAATGTCAGCTTGAATTT
CCTTTATGCATTTTTACAGAATCTGATGCATTATTGTTACTGAAGCGTAA
TTTGCAGTAATTTGGGGTTATTTTATTTCTTTCAGATTGAGCTGTTGACT
TTCAACCATGGGGAAGATATCTATCATTTGTATCGTTCTCCTCTGTATGG
TGAATGGGTGAGTCAAACAAACTCAAACTTCAATCTTGTCTCATTTTTGT
TATACATGTACACTGTTTTGTATAATGAATTTATCATAAACTTCAATTAC
ATCGTCTTTGTGGGATGTAAAGCTGGAGGAAGTCTTTCTTGCCCATTTTA
GACGTAGAAAGTTGTTTTCCACCCGAAATACACAAGTTTTCTGGGGGTGT
TTGAGAATGGTACGATAAAGATCAGGCTACCATACTTATGAATAAAAATA
TCAGGGGTCCATCCTAATGTGAGTGGATCAAACCTTACAGTCCGGACTTA
CACAGCTTGTACATACTGTACAGTACTGGTGTGCTGCTGTGGTTTACCTG
TTAGTGTTAGGCCACAGCGAGTTATTGGCTGTGATGCCATGTTTTGTTGC
TTCTGAATTCTTGTTACAACATCTATGCTATAGTGTCTATTTTGAAAATT
TCGCCTTATTTTGTATAGTTTACCTATCTTGTTTTTTTGTGCCCTATCTG
CAGAAGATGTCATCCATAAAATTTTCTTGCTGTGGTCTTATGCGAAACAA
ACAAACCGAAAGAATATAAAGAGAAATTAGACGCATGTTATTTGTTTTTA
ATCAGGCTGGCAGCCCTGTCCTGTATTCCATGTGAGGAGAGGGAGTGTGT
GGACCCACGGCCCTGTAGGAGAGACGCCGTCGTCAAGGACGTGTGTGGCT
GCTGTGACGTCTGTGCTAAGGTAGTTGTGTAGTAAAATCATCAGCAATCG
CTCGTGAACTTGTTTAAGGTGGAGAGCAGGTTGTGTGCCTGGGACCCATG
GACTATAGAGAAGATACTGTAAATGCAGAAATGTTTGCGGTGGTTTTATG
TTCGCAGATAGAGCATCAATGTATTACAATAAACATTTTCATTTGATTCA
CAGGTGAAAGGGGAAGTCTGTGGCGGTCCTTGGGATATTCAGGGCAAATG
TGCCAAGGGACTGACCTGTGTGAAACCTGAGATCGAAGGATCAGGCGACG
ATTTTATCATCTCCGACTTTAATCAGTCTGGAACATGTGAAAAAGACAAA
AAAGACAAAAAAGAGAAAGTAAAGAAGACAGGCAGAAGGCGATTTGGCGG
TTAGTCCTAAATAATAATTCCTTGGAGCTCTGAAGTGCCTATATAGGCAA
TAATCTCAAATGTAGTTTAGTGTTCTGTGCACCTATTTTTTTTTCAAACT
ATTGGAAAGAAGGTGACACAATAAATAAC Coding sequence (CDS) from alignment at Sc0000007:6499394..6500972+ >transcript:BL87539_cuf0 ID=transcript:BL87539_cuf0|Name=transcript:BL87539_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1098bp|location=Sequence derived from alignment at Sc0000007:6499394..6500972+ (Branchiostoma lanceolatum)
ATGGGGAAGATATCTATCATTTGTATCGTTCTCCTCTGTATGGTGAATGG
GCTGGCAGCCCTGTCCTGTATTCCATGTGAGGAGAGGGAGTGTGTGGACC
CACGGCCCTGTAGGAGAGACGCCGTCGTCAAGGACGTGTGTGGCTGCTGT
GACGTCTGTGCTAAGGTGAAAGGGGAAGTCTGTGGCGGTCCTTGGGATAT
TCAGGGCAAATGTGCCAAGGGACTGACCTGTGTGAAACCTGAGATCGAAG
GATCAGGCGACGATTTTATCATCTCCGACTTTAATCAGTCTGGAACATGT
GAAAAAGACAAAAAAGACAAAAAAGAGAAAGTAAAGAAGACAGGCAGAAG
GCGATTTGGCGGTTAGATGGGGAAGATATCTATCATTTGTATCGTTCTCC
TCTGTATGGTGAATGGGCTGGCAGCCCTGTCCTGTATTCCATGTGAGGAG
AGGGAGTGTGTGGACCCACGGCCCTGTAGGAGAGACGCCGTCGTCAAGGA
CGTGTGTGGCTGCTGTGACGTCTGTGCTAAGGTGAAAGGGGAAGTCTGTG
GCGGTCCTTGGGATATTCAGGGCAAATGTGCCAAGGGACTGACCTGTGTG
AAACCTGAGATCGAAGGATCAGGCGACGATTTTATCATCTCCGACTTTAA
TCAGTCTGGAACATGTGAAAAAGACAAAAAAGACAAAAAAGAGAAAGTAA
AGAAGACAGGCAGAAGGCGATTTGGCGGTTAGATGGGGAAGATATCTATC
ATTTGTATCGTTCTCCTCTGTATGGTGAATGGGCTGGCAGCCCTGTCCTG
TATTCCATGTGAGGAGAGGGAGTGTGTGGACCCACGGCCCTGTAGGAGAG
ACGCCGTCGTCAAGGACGTGTGTGGCTGCTGTGACGTCTGTGCTAAGGTG
AAAGGGGAAGTCTGTGGCGGTCCTTGGGATATTCAGGGCAAATGTGCCAA
GGGACTGACCTGTGTGAAACCTGAGATCGAAGGATCAGGCGACGATTTTA
TCATCTCCGACTTTAATCAGTCTGGAACATGTGAAAAAGACAAAAAAGAC
AAAAAAGAGAAAGTAAAGAAGACAGGCAGAAGGCGATTTGGCGGTTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000007 | genome | Sc0000007:6499394..6500972 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL87539_cuf0 |
| Biotype | protein_coding |
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