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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL86311_cuf0 >transcript:BL86311_cuf0-protein ID=transcript:BL86311_cuf0-protein|Name=transcript:BL86311_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=234bp
LTRALEATGIVHGLSEPDILTSLGKFIPTSGPAGMSEEDREMLRDVIRYS
NILLNFTLFRQDPSRTVVCHKPRGPAFALVDLLQEAIPDAVNIFLYRGLA
GYFDSTAYQMTGGSYWKYWLQSTLRLDTWAVQNRIDKSLLPYFDYVKFGS
LSVPHGYVWFCVCTWASFVKKVQDLTENCASPYAILRYEELGVLKEDMVL
KVMGNLGITYDHQSVKEKIRKVFGVNSQKGHAFQ Run BLAST on NCBI mRNA from alignment at Sc0000028:1537912..1539233- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL86311_cuf0 ID=transcript:BL86311_cuf0|Name=transcript:BL86311_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1322bp|location=Sequence derived from alignment at Sc0000028:1537912..1539233- (Branchiostoma lanceolatum)
GCTGACCAGGGCGCTGGAAGCGACAGGCATCGTGCACGGCTTGTCCGAAC
CTGACATCCTTACCTCCCTGGGTAAGTTCATCCCTACATCTGGTCCAGCC
GGGATGTCAGAGGAGGACAGAGAGATGCTGAGGGACGTCATCAGATACAG
CAACATCCTCCTTAACTTCACTCTCTTCAGGCAAGACCCTTCCAGGACAG
TCGTCTGCCACAAACCACGTGGACCGGTTGGTACAAGACATATCTATACG
TAACTCAGTTGTTAACCCATTGAAATCCTTTGTCAGTATCCACTGATGTT
AAATTTAAGAATCTTCTCTGAAATTCTGTTTAAAGCTGTTGCATGCTCAG
GATTTGTGTCCTCAAATATTGACCTGTCATTGTTTTTTTATTACCTCCCC
CAAGGTTATGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGCGAACATGATAACACGAGAATGCCTCGATGGATTGTCTTGATATTT
GGTATGTGGGTAGGTCTTGATGAGTGTGCAGAATGATTAGATTTTGGGCC
CCCAACCAACTTGTTATGGTACTGCAGCGGAACATCTGGTTTTGCTATGT
ATTTTAACTTTGTGTTTTGTGTACGCCTCTTTGTGTGTGTTTGACGTGCT
TTGCGGAAGTTTGTATTGAACTTTGAATACTGTTCCCAGGGCTAACCCTT
TGTAATGGCCTTCGGCTAGTTGGGTAGCCCTGGCTGTCCTTTTCTTTCAG
TCGAATAAATCAAATCAATATCTGGTTTTCTCCTACGTCCACAGGCTTTT
GCTCTAGTGGACCTCCTACAGGAAGCCATACCAGACGCAGTGAACATCTT
TCTCTATCGGGGCCTTGCTGGCTACTTCGACTCTACCGCCTACCAGATGA
CTGGAGGCAGTTACTGGAAATACTGGCTACAGTCGACCCTTAGACTGGAC
ACTTGGGCTGTCCAGAACAGGATAGATAAGTCACTCTTACCCTACTTTGA
CTATGTCAAGTTCGGTTCTCTATCTGTGCCACACGGGTACGTCTGGTTTT
GTGTCTGCACTTGGGCTTCATTTGTGAAGAAGGTGCAAGATCTCACGGAG
AATTGTGCAAGTCCTTACGCCATCTTAAGGTATGAAGAATTGGGTGTGCT
CAAAGAGGATATGGTGCTCAAGGTGATGGGAAATCTTGGCATTACTTATG
ATCACCAGAGTGTCAAAGAAAAGATCAGGAAGGTGTTTGGAGTGAATAGC
CAGAAGGGGCATGCTTTTCAGG Coding sequence (CDS) from alignment at Sc0000028:1537912..1539233- >transcript:BL86311_cuf0 ID=transcript:BL86311_cuf0|Name=transcript:BL86311_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1404bp|location=Sequence derived from alignment at Sc0000028:1537912..1539233- (Branchiostoma lanceolatum)
CTGACCAGGGCGCTGGAAGCGACAGGCATCGTGCACGGCTTGTCCGAACC
TGACATCCTTACCTCCCTGGGTAAGTTCATCCCTACATCTGGTCCAGCCG
GGATGTCAGAGGAGGACAGAGAGATGCTGAGGGACGTCATCAGATACAGC
AACATCCTCCTTAACTTCACTCTCTTCAGGCAAGACCCTTCCAGGACAGT
CGTCTGCCACAAACCACGTGGACCGGCTTTTGCTCTAGTGGACCTCCTAC
AGGAAGCCATACCAGACGCAGTGAACATCTTTCTCTATCGGGGCCTTGCT
GGCTACTTCGACTCTACCGCCTACCAGATGACTGGAGGCAGTTACTGGAA
ATACTGGCTACAGTCGACCCTTAGACTGGACACTTGGGCTGTCCAGAACA
GGATAGATAAGTCACTCTTACCCTACTTTGACTATGTCAAGTTCGGTTCT
CTATCTGTGCCACACGGGTACGTCTGGTTTTGTGTCTGCACTTGGGCTTC
ATTTGTGAAGAAGGTGCAAGATCTCACGGAGAATTGTGCAAGTCCTTACG
CCATCTTAAGGTATGAAGAATTGGGTGTGCTCAAAGAGGATATGGTGCTC
AAGGTGATGGGAAATCTTGGCATTACTTATGATCACCAGAGTGTCAAAGA
AAAGATCAGGAAGGTGTTTGGAGTGAATAGCCAGAAGGGGCATGCTTTTC
AGCTGACCAGGGCGCTGGAAGCGACAGGCATCGTGCACGGCTTGTCCGAA
CCTGACATCCTTACCTCCCTGGGTAAGTTCATCCCTACATCTGGTCCAGC
CGGGATGTCAGAGGAGGACAGAGAGATGCTGAGGGACGTCATCAGATACA
GCAACATCCTCCTTAACTTCACTCTCTTCAGGCAAGACCCTTCCAGGACA
GTCGTCTGCCACAAACCACGTGGACCGGCTTTTGCTCTAGTGGACCTCCT
ACAGGAAGCCATACCAGACGCAGTGAACATCTTTCTCTATCGGGGCCTTG
CTGGCTACTTCGACTCTACCGCCTACCAGATGACTGGAGGCAGTTACTGG
AAATACTGGCTACAGTCGACCCTTAGACTGGACACTTGGGCTGTCCAGAA
CAGGATAGATAAGTCACTCTTACCCTACTTTGACTATGTCAAGTTCGGTT
CTCTATCTGTGCCACACGGGTACGTCTGGTTTTGTGTCTGCACTTGGGCT
TCATTTGTGAAGAAGGTGCAAGATCTCACGGAGAATTGTGCAAGTCCTTA
CGCCATCTTAAGGTATGAAGAATTGGGTGTGCTCAAAGAGGATATGGTGC
TCAAGGTGATGGGAAATCTTGGCATTACTTATGATCACCAGAGTGTCAAA
GAAAAGATCAGGAAGGTGTTTGGAGTGAATAGCCAGAAGGGGCATGCTTT
TCAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000028 | genome | Sc0000028:1537912..1539233 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL86311_cuf0 |
| Biotype | protein_coding |
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