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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL85955_cuf0 >transcript:BL85955_cuf0-protein ID=transcript:BL85955_cuf0-protein|Name=transcript:BL85955_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=358bp
RGHNRTAITTASTDRMFKAEHNQLEGQISSSQLIIKKRIEVSSAFILGTR
RKGTFVNMRKRRLCGLILLQVICTIGLITYLHLVDTSRERETLQNVLRDD
NPYGNVRFGGKWSPSEENRCGCSEKVAILVPYRDREEHLDIFLRHMHPFL
QRHRLDYVIYVIEQHGEERNFCKGLLYNVGFTEALKDDPTYDCFIFHDVD
LLPEDNRNLYTCSKSPCHLSVAIDKFDYNLPYNDLFGGVSAMKTSHYKLV
NGYSNLFCGWGGEDDDIARRLKRHMLKISRPDKNVARYKMLSHNQTEKNP
QRFKLLGHWLSRAMKDGLKSLKTTGYNVTSTSQRELYTHILVNITKRGVI
DYHHKKAI Run BLAST on NCBI mRNA from alignment at Sc0000091:454178..457041- Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL85955_cuf0 ID=transcript:BL85955_cuf0|Name=transcript:BL85955_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2864bp|location=Sequence derived from alignment at Sc0000091:454178..457041- (Branchiostoma lanceolatum)
CGAGGACACAACCGTACAGCAATCACCACAGGTAAGAAACGACAGTTTAG
TCCTGACGTTTTAATGTCAGATTTTATACTTTTTTGGGAAAATGACGTGC
TATTCATCTTGTAAGTGGTCACGAATCAAGGAAACGGATATGAGGAACTG
TTAGCTAGCTGGTGATTATGGTAAGACACTCAAGGGTTTCGTTTCACACT
GTGGTGGTCACTTTGGGCATTAATGCATTACATCTTCAATCCTAATGTGT
TTTGAACGTGTAACTTAAATTTTGTCGTTTCGGTGTTACCCTTCTGACAT
GTGACATGTGAAAACCTTAGTGTCAGTGCGGTCACTGTTATATCAAACAT
TTTTCAAACTAGTAAGCGTTTCAGAGCTTGAGTCACGATGGAAAATTGAG
ATGATAAAGGAAGGCTGGGCGTTGACTACTACTAAAAAATACTAGCATTT
GTGGGATCTAAAAAAAAGGACGAAAATATATACGGTATCGAATTGCATAT
ACCATTAACATACGTGGCACGTGACATTTTCTGGTGGCTTGTCCCTATGG
CTTGCAGGATTTTACTCTGTTGTGTCGCTGAATGCCAACCTATTCCATTG
CTTTGCATAGAGAAGAAACGTGAAAATGAGACTTATTAATGTGTGCCTCA
CCCAAAGTGGAAGATAGCTGGTACCTCACGTTATGTGGTATCTCTACATT
ACATGCTACTTGGACATGTGTTGCGGTGTGTTAAGTGGCCATTGCGCATT
GTCCTGAATGTTTTGAATGTAGTAGGGTAAGCGTACATGTAACTTAATGG
TCGATAATACTTATCTCGTTCCAACAGCAAGCACCGATCGTATGTTCAAG
GCTGAACACAATCAACTAGAAGGACAAATAAGCTCCAGTCAGTTAATCAT
AAAGAAACGCATCGAGGTGTCATCAGCATTTATCCTGGGTACGAGACGAA
AAGGCACTTTTGTAAACATGAGAAAAAGGAGATTGTGCGGGCTTATTCTA
CTACAAGTTATCTGCACCATCGGATTGATAACGTACCTACATCTGGTGGA
TACGTCACGTGAAAGAGAAACGTTACAGAACGTACTTAGGGATGATAATC
CTTATGGTAATGTCAGGTTCGGTGGGAAATGGAGTCCCTCGGAGGAAAAT
CGGTGTGGCTGCTCGGAGAAAGTCGCCATCTTGGTGCCATACAGAGACAG
AGAGGAACACTTGGATATATTCCTCCGTCACATGCATCCGTTTCTCCAAC
GCCACCGGCTTGATTACGTAATCTACGTCATAGAACAACATGGCGAGGAA
CGCAACTTCTGCAAGGGCCTGCTTTACAACGTGGGCTTCACAGAAGCGTT
AAAAGACGACCCTACTTACGACTGCTTCATTTTCCACGATGTCGACCTCC
TTCCCGAAGACAACAGAAACCTGTATACCTGTAGTAAATCTCCCTGTCAC
TTGTCGGTGGCTATCGACAAATTCGATTACAACTTGCCCTACAATGATCT
GTTTGGCGGAGTTTCAGCCATGAAAACGTCTCACTACAAACTGGTGAACG
GTTATTCCAACTTGTTCTGTGGATGGGGAGGGGAGGATGATGACATAGCT
CGGCGACTGAAAAGACACATGTTGAAGATATCTCGTCCGGACAAAAATGT
CGCCAGATACAAGATGCTGTCTCACAACCAAACGGAAAAGAATCCGCAAA
GGTTCAAACTTTTAGGACATTGGTTATCCAGGGCTATGAAGGACGGACTG
AAAAGTTTAAAAACAACTGGGTATAATGTAACTTCAACATCACAAAGGGA
ACTATACACACACATCTTAGTAAACATTACAAAGAGAGGAGTCATAGATT
ATCATCACAAGAAGGCAATTTAGCAAACAGTAATTCCAGGTAGTTTTGTT
ACAACTTGCCTGCCCCAAATTGATTTTGTGGTTCACGGATTCACTAACTT
AAAATTCATTTGCTAATTTGAAATCTATAATCTGTGATGACAGGCATAGA
CTACTATAACTCTTGAATTTCATCGAATCGTTCTTTTGAACTTGCCTATT
TTGCTGATCTTACGAAAAATACATGTCAATGTTATGACAACGTACGTTCA
CGTCAGTTTTGTAACCGGATATATATTGCGTAATTGTAGCTCTCGCCAGA
TGGCGCTACTACACTAGTCTAGAATAAGCTTATGTTCAGAGCATGACAGA
TTGCCGATTTTCTTGTTCATTCTTTGACTTCTGGCTCAAAGTTTGAGTTT
TCGAAAGCGTTTAAATTTCAGTATGCATTTGTAAGGAGAAAACTGTTTTG
TCTTTCATAATTCATAAATTGTCTTCAAGTAGGCCAAACTTCGGTTCATT
CGAAAGTTATCTTTGTACATATTTGTAAATTGTAAACAGTTTTCAATTAT
TATGTTTTGTTTGGACGTTACGGAAGTTAATTTTCTTTAGAAATATTCAG
CTGCGTCATTCTGGTTGTCTCGGTCATTCCGTCTCAAATTCTATACAAAA
GAAAAAGTCCTTAGCCATGCTTTGAAAAACAGTTACTCAAGAACCATGAT
TCTTTTTTAGTTTTCACACGCAGTAAAAATTGACGAAAGACGTTACATAT
ACATGTAGTTTTACAGTTGTACTATATCCACACAGTTCCATATATCTAAT
ATTGCTTTCGGTTTGTATCTTCGTTTGTCTTGGTGTGTGTCCGTAGTTAA
TTTGAATATTGTAGAGTGACAGGATGTGAGGTGGAAGATGGTGTATCCGG
AGACTGGCAGGATGGGAAGGTTGGCCTGGCCCAGGTCCAAAGTTGGTCCC
GCAGGCTGCCACGAAAATGCATAAACATATTTAGCGAGAAATTAACTATG
ATGAATAAAACGAG Coding sequence (CDS) from alignment at Sc0000091:454178..457041- >transcript:BL85955_cuf0 ID=transcript:BL85955_cuf0|Name=transcript:BL85955_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=2154bp|location=Sequence derived from alignment at Sc0000091:454178..457041- (Branchiostoma lanceolatum)
CGAGGACACAACCGTACAGCAATCACCACAGCAAGCACCGATCGTATGTT
CAAGGCTGAACACAATCAACTAGAAGGACAAATAAGCTCCAGTCAGTTAA
TCATAAAGAAACGCATCGAGGTGTCATCAGCATTTATCCTGGGTACGAGA
CGAAAAGGCACTTTTGTAAACATGAGAAAAAGGAGATTGTGCGGGCTTAT
TCTACTACAAGTTATCTGCACCATCGGATTGATAACGTACCTACATCTGG
TGGATACGTCACGTGAAAGAGAAACGTTACAGAACGTACTTAGGGATGAT
AATCCTTATGGTAATGTCAGGTTCGGTGGGAAATGGAGTCCCTCGGAGGA
AAATCGGTGTGGCTGCTCGGAGAAAGTCGCCATCTTGGTGCCATACAGAG
ACAGAGAGGAACACTTGGATATATTCCTCCGTCACATGCATCCGTTTCTC
CAACGCCACCGGCTTGATTACGTAATCTACGTCATAGAACAACATGGCGA
GGAACGCAACTTCTGCAAGGGCCTGCTTTACAACGTGGGCTTCACAGAAG
CGTTAAAAGACGACCCTACTTACGACTGCTTCATTTTCCACGATGTCGAC
CTCCTTCCCGAAGACAACAGAAACCTGTATACCTGTAGTAAATCTCCCTG
TCACTTGTCGGTGGCTATCGACAAATTCGATTACAACTTGCCCTACAATG
ATCTGTTTGGCGGAGTTTCAGCCATGAAAACGTCTCACTACAAACTGGTG
AACGGTTATTCCAACTTGTTCTGTGGATGGGGAGGGGAGGATGATGACAT
AGCTCGGCGACTGAAAAGACACATGTTGAAGATATCTCGTCCGGACAAAA
ATGTCGCCAGATACAAGATGCTGTCTCACAACCAAACGGAAAAGAATCCG
CAAAGGTTCAAACTTTTAGGACATTGGTTATCCAGGGCTATGAAGGACGG
ACTGAAAAGTTTAAAAACAACTGGGTATAATGTAACTTCAACATCACAAA
GGGAACTATACACACACATCTTAGTAAACATTACAAAGAGAGGAGTCATA
GATTATCATCACAAGAAGGCAATTTAGCGAGGACACAACCGTACAGCAAT
CACCACAGCAAGCACCGATCGTATGTTCAAGGCTGAACACAATCAACTAG
AAGGACAAATAAGCTCCAGTCAGTTAATCATAAAGAAACGCATCGAGGTG
TCATCAGCATTTATCCTGGGTACGAGACGAAAAGGCACTTTTGTAAACAT
GAGAAAAAGGAGATTGTGCGGGCTTATTCTACTACAAGTTATCTGCACCA
TCGGATTGATAACGTACCTACATCTGGTGGATACGTCACGTGAAAGAGAA
ACGTTACAGAACGTACTTAGGGATGATAATCCTTATGGTAATGTCAGGTT
CGGTGGGAAATGGAGTCCCTCGGAGGAAAATCGGTGTGGCTGCTCGGAGA
AAGTCGCCATCTTGGTGCCATACAGAGACAGAGAGGAACACTTGGATATA
TTCCTCCGTCACATGCATCCGTTTCTCCAACGCCACCGGCTTGATTACGT
AATCTACGTCATAGAACAACATGGCGAGGAACGCAACTTCTGCAAGGGCC
TGCTTTACAACGTGGGCTTCACAGAAGCGTTAAAAGACGACCCTACTTAC
GACTGCTTCATTTTCCACGATGTCGACCTCCTTCCCGAAGACAACAGAAA
CCTGTATACCTGTAGTAAATCTCCCTGTCACTTGTCGGTGGCTATCGACA
AATTCGATTACAACTTGCCCTACAATGATCTGTTTGGCGGAGTTTCAGCC
ATGAAAACGTCTCACTACAAACTGGTGAACGGTTATTCCAACTTGTTCTG
TGGATGGGGAGGGGAGGATGATGACATAGCTCGGCGACTGAAAAGACACA
TGTTGAAGATATCTCGTCCGGACAAAAATGTCGCCAGATACAAGATGCTG
TCTCACAACCAAACGGAAAAGAATCCGCAAAGGTTCAAACTTTTAGGACA
TTGGTTATCCAGGGCTATGAAGGACGGACTGAAAAGTTTAAAAACAACTG
GGTATAATGTAACTTCAACATCACAAAGGGAACTATACACACACATCTTA
GTAAACATTACAAAGAGAGGAGTCATAGATTATCATCACAAGAAGGCAAT
TTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000091 | genome | Sc0000091:454178..457041 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL85955_cuf0 |
| Biotype | protein_coding |
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