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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL85661_cuf1 >transcript:BL85661_cuf1-protein ID=transcript:BL85661_cuf1-protein|Name=transcript:BL85661_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=401bp
MTMLKSLPHLMLLVATIILGLVPKVSPVLPPVYPVDPLMSWQIAPDHPVS
LGMGGSYAVSSIQLMTQSESRRPATRGTTDPCLLLTTLSLLLAGDIQTNP
GPNVSLPSKGVHVGHVNINSLRNKIQELSQLLHDNKFHILAVSETHLDNS
VLDGALHVGDYSVLRNDRNNRGGGVALFIDSNIPHKRRTDLETNGIEIIW
AEIHLPYVQPILVGCLYRPPSAKTEYLDKIIQSLETATAGDKEVMILGDF
NLDWLSETCTQKQRINMELSSLNLKQLVEDPTRICTNVNGRVTSSLIDLI
FTNRPDLFTRAKSCTLGCTDHNLVHVTRKTKPPKGQPTITVKRSYRKFNP
QNFLQDIAVVPWHLVYNEHDVNDALHCFMTLFSQVADQHAPVRKRSVRSS
P Run BLAST on NCBI mRNA from alignment at Sc0000166:9945..11669- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL85661_cuf1 ID=transcript:BL85661_cuf1|Name=transcript:BL85661_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=1725bp|location=Sequence derived from alignment at Sc0000166:9945..11669- (Branchiostoma lanceolatum)
GTCAGAGGTCACGCTACCAAAATGGACGCCTCCATGTCAGCTGGCGAGTA
AGGCCCCACTTTTTCATCAATTCCAAGAGTTAGATTGAACAACAGTAGTA
CAAGAGGTAACAGGGTAGTTATAGACACTGTCCAGTTACTACTAGTCCAC
TGATTTTTGGTAATTTTCCTCATTATTACTGAAATTTTGCCTGTATCCGT
GCCGGCCCGTACGCCGTGGGGAGGGCGGTCAGGCTCTTGGGGCATCACCA
GCCGGCAAAACGTGCAGATCCCGATGAAGTTGCTCACTCGGAGGTTCCAA
CACTGTCTTACCTTGTGCTGATTTACTCTAGTTGCAAACTATACGATGTT
GCGCCATTAGTATTGACTCAGACATAGTTGAAATTGTGTTCCCATCATAA
CAATTTGAAACAGTCACGTTACTTGACACTGTCTGTTTTTCCTGTGTGAT
TATGAAAGCAAAGCTAAAGTGTAACTAGCACTCTTATTGTTAAAAGAGAT
TTCCTGGAGTCCAAAGGTAACATGACTATGTTAAAATCGTTGCCTCACCT
TATGCTGCTTGTAGCTACTATTATTTTAGGCCTAGTACCAAAAGTCAGCC
CTGTGCTACCACCTGTGTATCCTGTGGACCCACTGATGTCATGGCAGATT
GCACCTGACCATCCAGTGTCCCTGGGTATGGGAGGATCTTATGCAGTAAG
CAGCATCCAACTTATGACCCAGTCAGAGTCAAGGAGACCTGCCACCAGAG
GTACAACAGACCCATGTTTACTCTTGACAACACTATCCCTGTTGCTGGCA
GGCGACATACAGACCAATCCGGGTCCCAATGTCAGCCTGCCAAGTAAAGG
GGTACATGTGGGCCACGTCAACATAAACAGTCTTCGTAATAAAATACAGG
AGTTGTCTCAGTTATTACACGACAACAAATTCCATATCTTGGCTGTTTCA
GAAACTCATCTTGACAATAGTGTGCTTGACGGAGCCCTACATGTAGGTGA
TTACTCAGTTTTACGGAATGACCGCAACAATAGAGGGGGTGGTGTTGCCT
TGTTTATAGACAGCAACATCCCTCATAAGAGACGAACAGATCTTGAAACC
AATGGCATTGAAATCATATGGGCTGAAATACACCTGCCCTATGTACAACC
TATACTTGTAGGTTGCCTGTATAGGCCTCCTAGTGCCAAGACAGAATATC
TTGACAAGATTATCCAGTCATTAGAAACAGCTACAGCTGGTGACAAGGAA
GTCATGATCTTAGGAGACTTTAATTTAGACTGGTTAAGTGAAACTTGCAC
ACAAAAACAAAGAATTAACATGGAACTGTCATCACTTAACTTAAAACAGC
TGGTAGAAGATCCAACCAGAATTTGTACAAATGTCAATGGCAGGGTAACA
TCGTCTTTGATAGATCTGATTTTCACAAACAGACCTGACTTATTCACGAG
AGCTAAGTCCTGTACACTAGGGTGCACTGATCACAATCTAGTGCATGTAA
CTAGGAAAACTAAGCCTCCAAAAGGACAGCCTACCATTACAGTCAAACGC
TCCTACAGGAAGTTCAACCCACAGAATTTCCTCCAAGACATTGCCGTTGT
CCCGTGGCACCTTGTATATAATGAGCATGATGTAAATGATGCCCTACATT
GTTTTATGACATTGTTCTCACAAGTAGCAGACCAGCACGCCCCAGTTCGC
AAACGCTCAGTGAGGTCATCGCCAG Coding sequence (CDS) from alignment at Sc0000166:9945..11669- >transcript:BL85661_cuf1 ID=transcript:BL85661_cuf1|Name=transcript:BL85661_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=1203bp|location=Sequence derived from alignment at Sc0000166:9945..11669- (Branchiostoma lanceolatum)
ATGACTATGTTAAAATCGTTGCCTCACCTTATGCTGCTTGTAGCTACTAT
TATTTTAGGCCTAGTACCAAAAGTCAGCCCTGTGCTACCACCTGTGTATC
CTGTGGACCCACTGATGTCATGGCAGATTGCACCTGACCATCCAGTGTCC
CTGGGTATGGGAGGATCTTATGCAGTAAGCAGCATCCAACTTATGACCCA
GTCAGAGTCAAGGAGACCTGCCACCAGAGGTACAACAGACCCATGTTTAC
TCTTGACAACACTATCCCTGTTGCTGGCAGGCGACATACAGACCAATCCG
GGTCCCAATGTCAGCCTGCCAAGTAAAGGGGTACATGTGGGCCACGTCAA
CATAAACAGTCTTCGTAATAAAATACAGGAGTTGTCTCAGTTATTACACG
ACAACAAATTCCATATCTTGGCTGTTTCAGAAACTCATCTTGACAATAGT
GTGCTTGACGGAGCCCTACATGTAGGTGATTACTCAGTTTTACGGAATGA
CCGCAACAATAGAGGGGGTGGTGTTGCCTTGTTTATAGACAGCAACATCC
CTCATAAGAGACGAACAGATCTTGAAACCAATGGCATTGAAATCATATGG
GCTGAAATACACCTGCCCTATGTACAACCTATACTTGTAGGTTGCCTGTA
TAGGCCTCCTAGTGCCAAGACAGAATATCTTGACAAGATTATCCAGTCAT
TAGAAACAGCTACAGCTGGTGACAAGGAAGTCATGATCTTAGGAGACTTT
AATTTAGACTGGTTAAGTGAAACTTGCACACAAAAACAAAGAATTAACAT
GGAACTGTCATCACTTAACTTAAAACAGCTGGTAGAAGATCCAACCAGAA
TTTGTACAAATGTCAATGGCAGGGTAACATCGTCTTTGATAGATCTGATT
TTCACAAACAGACCTGACTTATTCACGAGAGCTAAGTCCTGTACACTAGG
GTGCACTGATCACAATCTAGTGCATGTAACTAGGAAAACTAAGCCTCCAA
AAGGACAGCCTACCATTACAGTCAAACGCTCCTACAGGAAGTTCAACCCA
CAGAATTTCCTCCAAGACATTGCCGTTGTCCCGTGGCACCTTGTATATAA
TGAGCATGATGTAAATGATGCCCTACATTGTTTTATGACATTGTTCTCAC
AAGTAGCAGACCAGCACGCCCCAGTTCGCAAACGCTCAGTGAGGTCATCG
CCA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000166 | genome | Sc0000166:9945..11669 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL85661_cuf1 |
| Biotype | protein_coding |
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