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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL85435_cuf0 >transcript:BL85435_cuf0-protein ID=transcript:BL85435_cuf0-protein|Name=transcript:BL85435_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=112bp
MAWLCLRYSLERTLSKFIYIRQVQSNYYYVVYHNHTHILVTPCHIYTQST
WIQQTLQILVYQKVHAFSDMYVYKTTIQNLNTMTSYGGGSVVSSSERHKP
LTVCYEPLLLQL Run BLAST on NCBI mRNA from alignment at Sc0000002:85337..87568- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL85435_cuf0 ID=transcript:BL85435_cuf0|Name=transcript:BL85435_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2232bp|location=Sequence derived from alignment at Sc0000002:85337..87568- (Branchiostoma lanceolatum)
TGTCCACTACTGTTTATTACCATTATTAGTCACATTTTCAAAAGGTTTCC
ATACTTTTCTTCCCAAATCTTCCACAGTGCATGTAGAGGCAATACGATGT
TCATAAACAATGTGCAACATGATATCACATCACAGCATTATTAATAATAC
TAGCTTGTGTGCATTAAATTAATTGTGCGTACAAAAACCTCAGTAGATCA
TGCCTCCTGTAAATCATGATGAGTAAAAAATCAAAATCAACGGTGACAAT
AAAATCAAGATGCTTGGCACAAAGTTATGTCTGCGGTATAACATCTCAAA
CATTAAATAAATAATCAAGAGATAAAATGCCCCAAGTCATAATCTCAAAG
TGAAGTGAAGATTTAACTTGTGAAACTATAGGTCCAACGAAACACTCATG
ATTTCCTTGCTTTCTTAATGGTAGCTACACTCACATCAAGTAATCTTCCA
GGTATAAAAACCTTTTGGCAGGATGAAAAGATTTTCCACTGAAGCACTAT
GTGCAAAATTGTAATGATAATTTTCACGTGTGAAAAAGGCCTCATTTTTA
AACCCCTGCAACATCATTGCAAAAGAGCTAAGTCACATCAATGTATTTCT
GCTTACATCTTGTACAGTTCCTAGTTCTTTCATACTATGTATGGCATGGT
TATGTTTACGGTACTCCCTTGAACGTACACTATCCAAATTCATATACATA
AGGCAAGTGCAATCGAACTACTACTATGTAGTATATCATAATCACACACA
TATACTGGTAACACCATGTCACATATACACACAATCAACTTGGATCCAGC
AAACTTTACAGATACTAGTGTACCAAAAAGTCCATGCTTTCTCTGACATG
TATGTGTATAAAACAACAATCCAAAATCTTAACACAATGACATCCTATGG
TGGTGGATCAGTTGTATCTTCAAGCGAGAGGCACAAACCTTTGACAGTAT
GTTATGAACCCTTATTACTACAGTTGTAGACTTCTTTACTAAGTGTTTTT
GTAACGTTCCACTCTTTGAGTTTTAATCAGTCATGTCAGCGTCATACAAA
ATTACTAGTATTACACATCTACTGGTAGTATCCAATTATTGTACACTCAA
GACTTTCCAAGAGAATGTGTGACCTTTACTTGACTTTATTAGATTATATT
ATATTAGGCTAGTAGATAGTACTAATTGCACATCATGCAATGTATCTTCT
GCATCTCACAACAAAATGAATCAAAATCATAACCATTATTGTGCCATGAC
AATAAAACCACCACCTATTGAATCAACAAAATAATTGATTTCAAGAAGAA
CACCACCACAATAATGTCCACAAACTTGAATACTTGAGGTATAACTCCAC
GGCATATACAACCAGACTATGTTTTTAAACCATTGTAAACAGCCAGACCA
TACTTATAATTCATGACTAATCTTTACTACCTGGGGTAGATCAGTTGAAG
TTAGTACATCATACTGTAATTCTTGATTTGTTAACTGTAACTTAATTTTA
GCTGATTTAACGGTCACTAGTCAACAGCTAAAATGTCATCATTGCTAATA
TTTGATCCCTAATATTTGAGACAGTAATGTTTGTTCCCAACGTTAAAATT
AAGTGCCATGACCTACTCCATTTTCCCCCAACCACTATATTTTCCTGCTG
CTACATTAAAGTGATTTACAGTATCAAGCTATTTGCTATTTTTCATGATT
ACATTTGATTTCATTCGTTCAGAAATAGATAAAACTAGAAATTAATATAC
TGGATCCTTAACAGTTACATTTGGTAACTGACAATTGCATTGCACTAAAA
GTTGTGTGCTAAATAATTATTTCTATTGTGTATATAGCCCAAACAAAATG
CATAAACTTACATCATTAACAGGTTCAGTTTTATTCAACAGTTCACTGAC
TCATGGTCCCTGGTATGCAAAAGGTAATGACAACATATGTGATTTGTATC
AAGTCATCTTATTCAGACATTGGGGTAGAGCATATTTCCCTATGTAGTAC
AATGTGTGTTAACCATATATTTAAACTACAAAAGAACCTATCAGTTGATA
AATAAATACCATTGTTTGACCTACTTGTATGTTTACAGTTAAAGTACATT
AGTATTCAACAGTTGTTCTGTCTGCTCCATTGCATTTAACAATATAAGTT
TCTATGGTAGTAGTTATCACCCAATGGAACTATTGTATTCCATGTTAACG
ACTTCTTAAATAAAATAAAAATTCCAAATGAG Coding sequence (CDS) from alignment at Sc0000002:85337..87568- >transcript:BL85435_cuf0 ID=transcript:BL85435_cuf0|Name=transcript:BL85435_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=339bp|location=Sequence derived from alignment at Sc0000002:85337..87568- (Branchiostoma lanceolatum)
ATGGCATGGTTATGTTTACGGTACTCCCTTGAACGTACACTATCCAAATT
CATATACATAAGGCAAGTGCAATCGAACTACTACTATGTAGTATATCATA
ATCACACACATATACTGGTAACACCATGTCACATATACACACAATCAACT
TGGATCCAGCAAACTTTACAGATACTAGTGTACCAAAAAGTCCATGCTTT
CTCTGACATGTATGTGTATAAAACAACAATCCAAAATCTTAACACAATGA
CATCCTATGGTGGTGGATCAGTTGTATCTTCAAGCGAGAGGCACAAACCT
TTGACAGTATGTTATGAACCCTTATTACTACAGTTGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000002 | genome | Sc0000002:85337..87568 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL85435_cuf0 |
| Biotype | protein_coding |
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