|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL83919_cuf0 >transcript:BL83919_cuf0-protein ID=transcript:BL83919_cuf0-protein|Name=transcript:BL83919_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=144bp
RGSVIQLFAAGVFLVAVCLVLWQGAELRERRVVLDTVLDEVTLQSEEIRY
LREQVYLLKKEREDDKTHSETPEDTVQDEAFQERDLTAGTESESMDNDVD
TDNQDNMRDTPWRLEDKLHGRSKRSLPRGCYPSACKGDRGLRGW Run BLAST on NCBI mRNA from alignment at Sc0000036:2117293..2118763- Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL83919_cuf0 ID=transcript:BL83919_cuf0|Name=transcript:BL83919_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1471bp|location=Sequence derived from alignment at Sc0000036:2117293..2118763- (Branchiostoma lanceolatum)
CGCGGCTCTGTCATCCAGCTCTTCGCGGCCGGTGTTTTCCTGGTTGCCGT
CTGCCTGGTGCTGTGGCAGGGGGCTGAGCTGAGGGAACGCCGGGTCGTGC
TGGACACGGTCCTGGACGAAGTCACCCTACAGAGCGAAGAGATTCGGTAC
CTGAGAGAACAGGTCTACTTGCTGAAGAAAGAAAGAGAAGACGACAAGAC
TCACTCCGAGACACCAGAAGACACCGTCCAAGACGAGGCCTTTCAGGAAC
GAGATTTGACAGCAGGAACTGAAGTAAGAACCCATTTGTTTCTTTGTATT
TAGTTGTTGCAATTTGTGGCCACCATTAAGGTTTTTGTGCTAGACTTCAG
TTCTGCTGGAAGAATCCTTCCCCTCCGTTTTTTTCGTATTGCCAAGCACC
TGTTTAAGAGCCCCAGTCCGCCACAGACTACGCTCAGATATCCATATCTG
GTGTCTTGTTGGACAATAATACCGTACATGCCGCAGTCAGATTTCATGTG
TTCTTTTTGACCGGTTAAATAAAAGACAAAACTTTATCCATCCATCCATC
CATCCATCCATCCATCAATCCTATCTATTCATCCATCCATCAATCTATCT
ATTAATAAGGCAATCGATCAATGAAAAACGTTCATAACTTTTGAAGTATC
CTGTTCACCCACCCACCAAACTAACAAACCGCCCATCCGCCTGCCGTTTA
ATGACCGTGTTTATACCAGAGCCAGTGACTGTCGCTAACGCGTTTAAGAC
AACTCCTTTGCTCATTTGTGACCTCTCATGTTTTGAACTCTCCTCAAATG
TAAACTCCGCCCACTTGGCATGATGCCAAGTACGTAGATCTGTAATATGC
TCCAAGCAGAGGTTTCGGTCGGAGGGCTCAGTGTAGTGGCCGCGATTTTT
AACATCTCCCTCCCTTCACGTTGAATTTAAGCACTGTTAGTTATGTAATG
GCAAATTGCATTTCAGTCTGTTTTCGCACTCGGCGTTGCCGATATGTACC
ACCGCTCTAAAGGTGAATAAAGTCTAAAGGTGGAATAGATAATGATGTTT
TTCTTAACTTCTAATTTGCAGTCGGAGTCCATGGACAATGACGTTGATAC
CGATAATCAGGACAATATGAGGGACACTCCCTGGCGACTGGAAGATAAAT
TGCACGGCAGATCGAAGAGGAGTCTTCCGAGTAAGTTTCAATAACCAAAT
CAGACAAAAAAGTTTAGATAGCGTTTAAACCAAAACAAAACTACAGAACT
ATAAAGTTGCAGAATTATATATCCAACAATACATCTAGCGCTCCCGGTCT
AGGATATTCAATCGTCATGATAGGAATAATACAGTTCTATAAAATGCTGC
TTGTTGAAGTCTAGTTAATGTTATGGCACGACATCGATACATTGGACGCT
CATTTTGCCTGTACTTCCAGGGGGGTGCTACCCATCCGCGTGTAAGGGAG
ACAGGGGGCTGAGAGGCTGGA Coding sequence (CDS) from alignment at Sc0000036:2117293..2118763- >transcript:BL83919_cuf0 ID=transcript:BL83919_cuf0|Name=transcript:BL83919_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1296bp|location=Sequence derived from alignment at Sc0000036:2117293..2118763- (Branchiostoma lanceolatum)
CGCGGCTCTGTCATCCAGCTCTTCGCGGCCGGTGTTTTCCTGGTTGCCGT
CTGCCTGGTGCTGTGGCAGGGGGCTGAGCTGAGGGAACGCCGGGTCGTGC
TGGACACGGTCCTGGACGAAGTCACCCTACAGAGCGAAGAGATTCGGTAC
CTGAGAGAACAGGTCTACTTGCTGAAGAAAGAAAGAGAAGACGACAAGAC
TCACTCCGAGACACCAGAAGACACCGTCCAAGACGAGGCCTTTCAGGAAC
GAGATTTGACAGCAGGAACTGAATCGGAGTCCATGGACAATGACGTTGAT
ACCGATAATCAGGACAATATGAGGGACACTCCCTGGCGACTGGAAGATAA
ATTGCACGGCAGATCGAAGAGGAGTCTTCCGAGGGGGTGCTACCCATCCG
CGTGTAAGGGAGACAGGGGGCTGAGAGGCTGGCGCGGCTCTGTCATCCAG
CTCTTCGCGGCCGGTGTTTTCCTGGTTGCCGTCTGCCTGGTGCTGTGGCA
GGGGGCTGAGCTGAGGGAACGCCGGGTCGTGCTGGACACGGTCCTGGACG
AAGTCACCCTACAGAGCGAAGAGATTCGGTACCTGAGAGAACAGGTCTAC
TTGCTGAAGAAAGAAAGAGAAGACGACAAGACTCACTCCGAGACACCAGA
AGACACCGTCCAAGACGAGGCCTTTCAGGAACGAGATTTGACAGCAGGAA
CTGAATCGGAGTCCATGGACAATGACGTTGATACCGATAATCAGGACAAT
ATGAGGGACACTCCCTGGCGACTGGAAGATAAATTGCACGGCAGATCGAA
GAGGAGTCTTCCGAGGGGGTGCTACCCATCCGCGTGTAAGGGAGACAGGG
GGCTGAGAGGCTGGCGCGGCTCTGTCATCCAGCTCTTCGCGGCCGGTGTT
TTCCTGGTTGCCGTCTGCCTGGTGCTGTGGCAGGGGGCTGAGCTGAGGGA
ACGCCGGGTCGTGCTGGACACGGTCCTGGACGAAGTCACCCTACAGAGCG
AAGAGATTCGGTACCTGAGAGAACAGGTCTACTTGCTGAAGAAAGAAAGA
GAAGACGACAAGACTCACTCCGAGACACCAGAAGACACCGTCCAAGACGA
GGCCTTTCAGGAACGAGATTTGACAGCAGGAACTGAATCGGAGTCCATGG
ACAATGACGTTGATACCGATAATCAGGACAATATGAGGGACACTCCCTGG
CGACTGGAAGATAAATTGCACGGCAGATCGAAGAGGAGTCTTCCGAGGGG
GTGCTACCCATCCGCGTGTAAGGGAGACAGGGGGCTGAGAGGCTGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000036 | genome | Sc0000036:2117293..2118763 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL83919_cuf0 |
| Biotype | protein_coding |
|
