transcript:BL83507_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL83507_cuf0
Unique Nametranscript:BL83507_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL83507_cuf0

>transcript:BL83507_cuf0-protein ID=transcript:BL83507_cuf0-protein|Name=transcript:BL83507_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=248bp
QGCPLSYLLFILVTEIMATKIRKSKEINGILVPHNEGSEEIKISQVADDT
TLILANEHSIVNAVEIITEFSKVAGTKLNKTKTQAIWIGVWEKKDKKILD
LDWTKEPIKALGMYFGHNPSVCELLNWEKKIEKLKNTLNLWRGRKLTLYG
KVIVIKQLALSQLIYNFININTPEWAIKEIEKALWSFLWNGKPDKISRNC
IIGDYCDGGIKMVNVRCQIQGLLASWVRRFCNGHMAHWKLIPNFYLKD
Run BLAST on NCBI

mRNA from alignment at Sc0000352:38478..39224-

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL83507_cuf0 ID=transcript:BL83507_cuf0|Name=transcript:BL83507_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=747bp|location=Sequence derived from alignment at Sc0000352:38478..39224- (Branchiostoma lanceolatum)
ACAGGGTTGCCCATTATCATATTTGCTGTTTATATTAGTGACAGAAATTA
TGGCCACTAAGATAAGAAAATCTAAGGAAATAAATGGTATTTTAGTTCCG
CATAATGAGGGTAGTGAAGAAATAAAGATAAGCCAGGTAGCTGATGACAC
AACATTAATTCTAGCAAATGAACATTCGATAGTAAATGCTGTAGAAATTA
TAACTGAATTTAGTAAAGTAGCAGGAACTAAACTTAATAAAACTAAAACC
CAGGCTATTTGGATTGGTGTGTGGGAGAAAAAAGATAAGAAGATTCTAGA
TCTAGATTGGACAAAAGAACCAATTAAAGCACTTGGGATGTACTTTGGCC
ACAACCCAAGTGTATGTGAGCTCTTAAACTGGGAGAAGAAAATAGAGAAG
CTAAAGAATACCCTTAATTTGTGGAGAGGCAGAAAACTAACCCTTTATGG
TAAAGTAATAGTTATTAAACAACTTGCATTGTCCCAACTAATTTATAATT
TCATTAATATTAATACCCCAGAATGGGCAATAAAGGAGATAGAAAAAGCA
TTGTGGAGCTTTCTTTGGAATGGTAAACCAGATAAAATCTCTAGAAATTG
TATAATTGGTGATTATTGTGATGGTGGCATAAAAATGGTAAATGTTAGAT
GTCAGATTCAAGGTCTATTGGCTTCATGGGTCAGGAGATTTTGTAATGGA
CATATGGCCCATTGGAAATTGATACCAAATTTCTACCTGAAAGATTT

Coding sequence (CDS) from alignment at Sc0000352:38478..39224-

>transcript:BL83507_cuf0 ID=transcript:BL83507_cuf0|Name=transcript:BL83507_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=744bp|location=Sequence derived from alignment at Sc0000352:38478..39224- (Branchiostoma lanceolatum)
CAGGGTTGCCCATTATCATATTTGCTGTTTATATTAGTGACAGAAATTAT
GGCCACTAAGATAAGAAAATCTAAGGAAATAAATGGTATTTTAGTTCCGC
ATAATGAGGGTAGTGAAGAAATAAAGATAAGCCAGGTAGCTGATGACACA
ACATTAATTCTAGCAAATGAACATTCGATAGTAAATGCTGTAGAAATTAT
AACTGAATTTAGTAAAGTAGCAGGAACTAAACTTAATAAAACTAAAACCC
AGGCTATTTGGATTGGTGTGTGGGAGAAAAAAGATAAGAAGATTCTAGAT
CTAGATTGGACAAAAGAACCAATTAAAGCACTTGGGATGTACTTTGGCCA
CAACCCAAGTGTATGTGAGCTCTTAAACTGGGAGAAGAAAATAGAGAAGC
TAAAGAATACCCTTAATTTGTGGAGAGGCAGAAAACTAACCCTTTATGGT
AAAGTAATAGTTATTAAACAACTTGCATTGTCCCAACTAATTTATAATTT
CATTAATATTAATACCCCAGAATGGGCAATAAAGGAGATAGAAAAAGCAT
TGTGGAGCTTTCTTTGGAATGGTAAACCAGATAAAATCTCTAGAAATTGT
ATAATTGGTGATTATTGTGATGGTGGCATAAAAATGGTAAATGTTAGATG
TCAGATTCAAGGTCTATTGGCTTCATGGGTCAGGAGATTTTGTAATGGAC
ATATGGCCCATTGGAAATTGATACCAAATTTCTACCTGAAAGAT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL83507gene:BL83507Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL83507_cuf0-E1BL83507_cuf0-E1-1564476830-445381Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL83507_cuf0transcript:BL83507_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000352genomeSc0000352:38478..39224 -
Properties
Property NameValue
Transcript idBL83507_cuf0
Biotypeprotein_coding