|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL82060_cuf0 >transcript:BL82060_cuf0-protein ID=transcript:BL82060_cuf0-protein|Name=transcript:BL82060_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=261bp
VGIQHSSNTTSAAAIESACRKGKGRISAILSTGLEGHTPNPLVTKILYHT
IVIPSMLHGCELWYPTQTDLMKLERVHRGGVKRMQNMHPQTGTRESLGAL
GMHTLKAIMDKHKLCFFGRLANLPCTALAKKVFLFRLYSHILARPCRTTR
GFISDSFRAAEDYGLTEYLERYWQTVEFPTKMEWKQIVKRAVSAKEESEW
VSAHSHQPRSFRVHSTSSEPHKLWSLARKHPKHQKTLQKLVHLSTAPVKH
SPIXEQPKITA Run BLAST on NCBI mRNA from alignment at Sc0000070:181992..183659+ Legend: CDSpolypeptideexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL82060_cuf0 ID=transcript:BL82060_cuf0|Name=transcript:BL82060_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1668bp|location=Sequence derived from alignment at Sc0000070:181992..183659+ (Branchiostoma lanceolatum)
GTGGGAATACAACATTCGTCCAACACAACTTCAGCGGCAGCCATAGAGAG
TGCCTGTAGAAAGGGGAAAGGGCGTATCAGTGCCATCTTGTCTACCGGTC
TAGAAGGACACACCCCCAACCCACTGGTCACAAAAATACTTTACCACACA
ATCGTCATACCCAGTATGTTGCACGGTTGCGAATTATGGTACCCTACCCA
GACAGACCTGATGAAGTTGGAGAGAGTTCACAGAGGAGGGGTGAAGCGTA
TGCAGAATATGCACCCACAGACAGGAACTAGAGAGAGCCTTGGTGCCCTG
GGGATGCATACTCTGAAAGCCATCATGGACAAACACAAGCTGTGTTTCTT
CGGTAGGCTTGCCAATCTCCCCTGTACTGCACTAGCCAAGAAAGTCTTCC
TCTTCAGATTGTATTCGCACATACTGGCAAGGCCGTGTCGCACAACAAGA
GGTTTCATTAGCGACAGCTTCAGAGCAGCCGAAGATTACGGCCTAACAGA
GTACCTTGAAAGATACTGGCAAACGGTAGAGTTCCCGACAAAAATGGAGT
GGAAGCAAATAGTGAAGAGGGCAGTGAGTGCCAAGGAAGAGAGTGAATGG
GTCTCAGCACACAGTCACCAACCTAGATCCTTCAGAGTACACAGTACGAG
CTCAGAACCCCACAAGCTGTGGTCACTTGCAAGGAAACATCCAAAGCACC
AAAAGACTCTACAGAAACTAGTACATCTGAGTACAGCCCCGGTGAAACAC
AGTCCTATAGNAGAGCAGCCGAAGATTACGGCCTAACAGAGTACCTTGAA
AGATACTGGCAAACGGTAGAGTTCCCGACAAAAATGGAGTGGAAGCAAAT
AGTGAAGAGGGCAGTGAGTGCCAAGGAAGAGAGTGAATGGGTCTCAGCAC
ACAGTCACCAACCTAGATCCTTCAGAGTACACAGTACGAGCTCAGAACCC
CACAAGCTGTGGTCACTTGCAAGGAAACACCCAAAGCACCAAAAGACTCT
ACAGAAACTAGTACATCTGAGTACAGCCCCGGTGAAACACAGCCCTAAGC
AATGCCCTACATGTGACGCAACAACAACAGATATAGTCGGGCACTTGGTC
TCTAGCTGTGTCACCTTTAACAACCTCAGAGACAGTTTAGCAGATGCAGC
AACAGACAAGCTGGGCATCAGGGTGATGGCGTCCGTTCACCAACAGCCAG
ACGAAAGGTTTACGGAAATAATGCTGGGAGCAGATATTGTAGAAGATGAG
ATTGACCCTGTCATTTGGGGGGACTACATGATAACTGTAGCTGGACTGCT
GTATCCCCTAGCAACTTTAGCACTAAAGCATGTGGACTTTAGGAGATAAG
GAAAGACCAACAAGCCGAGATTAAGGACAGTTTGCTCCGTTCCCACTCTA
CTTCTAAAGTACCAGTGTAGCAGCAGGGGTGTTCCAACATACAAGATGAA
AGGGACATTGATGACTCATGGACACTTTTAAGTCTCAGTACAATGTATAC
AGGACTCTGATGATCCCTGTAAGAATATAAGGATTCAGTGCTAATGCGCA
CAACCGAAAATTTCCAATGATGAGTGATTCACTGAAATAACCAGTACCGA
ACTGACCGAAATCGTTTGTAACGATTAATGCTATCAAATGTTTTATTGAA
TCTTGTGTATATATGCAG Coding sequence (CDS) from alignment at Sc0000070:181992..183659+ >transcript:BL82060_cuf0 ID=transcript:BL82060_cuf0|Name=transcript:BL82060_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=786bp|location=Sequence derived from alignment at Sc0000070:181992..183659+ (Branchiostoma lanceolatum)
GTGGGAATACAACATTCGTCCAACACAACTTCAGCGGCAGCCATAGAGAG
TGCCTGTAGAAAGGGGAAAGGGCGTATCAGTGCCATCTTGTCTACCGGTC
TAGAAGGACACACCCCCAACCCACTGGTCACAAAAATACTTTACCACACA
ATCGTCATACCCAGTATGTTGCACGGTTGCGAATTATGGTACCCTACCCA
GACAGACCTGATGAAGTTGGAGAGAGTTCACAGAGGAGGGGTGAAGCGTA
TGCAGAATATGCACCCACAGACAGGAACTAGAGAGAGCCTTGGTGCCCTG
GGGATGCATACTCTGAAAGCCATCATGGACAAACACAAGCTGTGTTTCTT
CGGTAGGCTTGCCAATCTCCCCTGTACTGCACTAGCCAAGAAAGTCTTCC
TCTTCAGATTGTATTCGCACATACTGGCAAGGCCGTGTCGCACAACAAGA
GGTTTCATTAGCGACAGCTTCAGAGCAGCCGAAGATTACGGCCTAACAGA
GTACCTTGAAAGATACTGGCAAACGGTAGAGTTCCCGACAAAAATGGAGT
GGAAGCAAATAGTGAAGAGGGCAGTGAGTGCCAAGGAAGAGAGTGAATGG
GTCTCAGCACACAGTCACCAACCTAGATCCTTCAGAGTACACAGTACGAG
CTCAGAACCCCACAAGCTGTGGTCACTTGCAAGGAAACATCCAAAGCACC
AAAAGACTCTACAGAAACTAGTACATCTGAGTACAGCCCCGGTGAAACAC
AGTCCTATAGNAGAGCAGCCGAAGATTACGGCCTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000070 | genome | Sc0000070:181992..183659 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL82060_cuf0 |
| Biotype | protein_coding |
|
