transcript:BL81985_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL81985_cuf0
Unique Nametranscript:BL81985_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL81985_cuf0

>transcript:BL81985_cuf0-protein ID=transcript:BL81985_cuf0-protein|Name=transcript:BL81985_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=103bp
INVCAINVCAINVCAINVCAINVCAINVCAINVCAINVCAINVCAINVCA
INVCAINVCAINVCAINVCAINVCAINVCAINVCAITVKVSKTLDLNAWK
LCD
Run BLAST on NCBI

mRNA from alignment at Sc0000031:17..684-

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL81985_cuf0 ID=transcript:BL81985_cuf0|Name=transcript:BL81985_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=668bp|location=Sequence derived from alignment at Sc0000031:17..684- (Branchiostoma lanceolatum)
CCATCAATGTGTGTGCCATCAATGTGTGTGCCATCAATGTGTGTGCCATC
AATGTGTGTGCCATCAATGTGTGTGCCATCAATGTGTGTGCCATCAATGT
GTGTGCCATCAATGTGTGTGCCATCAATGTGTGTGCCATCAATGTGTGTG
CCATCAATGTGTGTGCCATCAATGTGTGTGCCATCAATGTGTGTGCCATC
AATGTGTGTGCCATCAATGTGTGTGCCATCAATGTGTGTGCCATCAATGT
GTGTGCCATCACTGTCAAGGTGAGTAAAACACTAGATCTTAATGCGTGGA
AGTTGTGTGATTGAAAAGGAAGGAACTCTTGGCTGACAGACTTTCTGACA
TCGATGGGTCAAAGCTCAGGACTGACCTCGTTGGCCTTGAAGCTTCTGCC
CTGCATCCCGTGTTTGTGGAACGCCAGCACGCTGTCCTGGAGACACACTG
CAAACAACATGTAAATAACAACATGTAAATAACAACATCCCGTGTTTGTG
GAACACCAGCACGCTGTCCTGGAGACAGACTGCAAACACCTGGACAATAA
ATAAATAAATAAGTTCGTAAACAACAACAATGCGTTAGTGTAACCCATGT
CATGGTCACGTCAAGTCTAACAAAGTGCTGTACCTACACAGTCACTGTTT
CCCAAAAGTCGTGTGCAG

Coding sequence (CDS) from alignment at Sc0000031:17..684-

>transcript:BL81985_cuf0 ID=transcript:BL81985_cuf0|Name=transcript:BL81985_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=312bp|location=Sequence derived from alignment at Sc0000031:17..684- (Branchiostoma lanceolatum)
ATCAATGTGTGTGCCATCAATGTGTGTGCCATCAATGTGTGTGCCATCAA
TGTGTGTGCCATCAATGTGTGTGCCATCAATGTGTGTGCCATCAATGTGT
GTGCCATCAATGTGTGTGCCATCAATGTGTGTGCCATCAATGTGTGTGCC
ATCAATGTGTGTGCCATCAATGTGTGTGCCATCAATGTGTGTGCCATCAA
TGTGTGTGCCATCAATGTGTGTGCCATCAATGTGTGTGCCATCAATGTGT
GTGCCATCACTGTCAAGGTGAGTAAAACACTAGATCTTAATGCGTGGAAG
TTGTGTGATTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL81985gene:BL81985Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL81985_cuf0-E1BL81985_cuf0-E1-1564476830-177492Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL81985_cuf0transcript:BL81985_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000031genomeSc0000031:17..684 -
Properties
Property NameValue
Transcript idBL81985_cuf0
Biotypeprotein_coding